Research Output

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2020

A workflow for visualizing human cancer biopsies using large-format electron microscopy

Riesterer, J. L., López, C. S., Stempinski, E. S., Williams, M., Loftis, K., Stoltz, K., Thibault, G., Lanicault, C., Williams, T. & Gray, J. W., 2020, Methods in Cell Biology. Tran, P. (ed.). Academic Press Inc., p. 163-181 19 p. (Methods in Cell Biology; vol. 158).

Research output: Chapter in Book/Report/Conference proceedingChapter

High-dimensional multiplexed immunohistochemical characterization of immune contexture in human cancers

Banik, G., Betts, C. B., Liudahl, S. M., Sivagnanam, S., Kawashima, R., Cotechini, T., Larson, W., Goecks, J., Pai, S. I., Clayburgh, D. R., Tsujikawa, T. & Coussens, L. M., 2020, Methods in Enzymology. Galluzzi, L. & Rudqvist, N-P. (eds.). Academic Press Inc., p. 1-20 20 p. (Methods in Enzymology; vol. 635).

Research output: Chapter in Book/Report/Conference proceedingChapter

Miniaturized Single Cell Imaging for Developing Immuno-Oncology Combinational Therapies

Jacob, T., Malla, P. & Vu, T., Jan 1 2020, Methods in Pharmacology and Toxicology. Humana Press Inc., p. 157-165 9 p. (Methods in Pharmacology and Toxicology).

Research output: Chapter in Book/Report/Conference proceedingChapter

2019

Methodology for Detecting and Tracking Brain-Derived Neurotrophic Factor Complexes in Neurons Using Single Quantum Dots

Vermehren-Schmaedick, A., Jacob, T. & Vu, T. T., Jan 1 2019, Neuromethods. Humana Press Inc., p. 105-118 14 p. (Neuromethods; vol. 143).

Research output: Chapter in Book/Report/Conference proceedingChapter

2018

Sensory integration for human balance control

Peterka, R. B., Jan 1 2018, Handbook of Clinical Neurology. Elsevier B.V., p. 27-42 16 p. (Handbook of Clinical Neurology; vol. 159).

Research output: Chapter in Book/Report/Conference proceedingChapter

5 Scopus citations
2017

The optics of deep optical imaging in tissues using long wavelengths

Jacques, S., Jan 1 2017, Deep Imaging in Tissue and Biomedical Materials: Using Linear and Nonlinear Optical Methods. Pan Stanford Publishing Pte. Ltd., p. 91-106 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2016

Contact-activation pathways as targets for new anticoagulants

Gailani, D., Renné, T. & Gruber, A., Apr 19 2016, New Therapeutic Agents in Thrombosis and Thrombolysis: Third Edition. CRC Press, p. 377-397 21 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Methods of melanoma detection

Leachman, S. A., Cassidy, P. B., Chen, S. C., Curiel, C., Geller, A., Gareau, D., Pellacani, G., Grichnik, J. M., Malvehy, J., North, J., Jacques, S. L., Petrie, T., Puig, S., Swetter, S. M., Tofte, S. & Weinstock, M. A., Jan 1 2016, Cancer Treatment and Research. Kluwer Academic Publishers, p. 51-105 55 p. (Cancer Treatment and Research; vol. 167).

Research output: Chapter in Book/Report/Conference proceedingChapter

22 Scopus citations

Noninvasive Topical In Vivo Imaging of Skin: Confocal Reflectance Microscopy and Polarized Light Imaging

Jacques, S., Aug 19 2016, Imaging in Dermatology. Elsevier Inc., p. 281-290 10 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

Polarized light imaging of biological tissues

Jacques, S., Apr 19 2016, Handbook of Biomedical Optics. CRC Press, p. 649-669 21 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

24 Scopus citations

Quantitative super-resolution microscopy for cancer biology and medicine

Peters, A., Nickerson, A., Lin, L. J. & Nan, X., Nov 25 2016, Food as Medicine: Functional Food Plants of Africa. CRC Press, p. 321-355 35 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2014

Understanding and Using Information about Cancer Genomes

Spellman, P. T., Stuart, J. & Gray, J. W., Mar 1 2014, The Molecular Basis of Cancer: Fourth Edition. Elsevier Inc., p. 357-368.e3

Research output: Chapter in Book/Report/Conference proceedingChapter

2013

Blood Coagulation and Blood - Materials Interactions

Hanson, S. R. & Tucker, E., Jan 1 2013, Biomaterials Science: An Introduction to Materials: Third Edition. Elsevier Inc., p. 551-557 7 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

6 Scopus citations

Confocal laser scanning microscopy using scattering as the contrast mechanism

Jacques, S., Jan 1 2013, Handbook of Coherent-Domain Optical Methods: Biomedical Diagnostics, Environmental Monitoring, and Materials Science:: Second Edition. Springer New York, Vol. 2-2. p. 1157-1171 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Tracing the endocytic pathways and trafficking kinetics of cell signaling receptors using single QD nanoparticles

Fichter, K. M. & Vu, T. Q., May 8 2013, Cellular and Subcellular Nanotechnology: Methods and Protocols. Weissig, V., Olsen, M. & Elbayoumi, T. (eds.). p. 237-247 11 p. (Methods in Molecular Biology; vol. 991).

Research output: Chapter in Book/Report/Conference proceedingChapter

2012

Electrochemical sensors based on nanomaterials for environmental monitoring

Yantasee, W., Lin, Y. & Fryxell, G. E., Jan 1 2012, Environmental Applications of Nanomaterials: Synthesis, Sorbents and Sensors, 2nd Edition. Imperial College Press, p. 523-559 37 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

Functionalized nanoporous silica for oral chelation therapy of a broad range of radionuclides

Yantasee, W., Chouyyok, W., Wiacek, R. J., Creim, J. A., Addleman, R. S., Fryxell, G. E. & Timchalk, C., Jan 1 2012, Environmental Applications of Nanomaterials: Synthesis, Sorbents and Sensors, 2nd Edition. Imperial College Press, p. 369-379 11 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Platelet shape change and spreading

Aslan, J. E., Itakura, A., Gertz, J. M. & McCarty, O. J. T., Jan 2 2012, Platelets and Megakaryocytes: Volume 3, Additional Protocols and Perspectives. Gibbins, J. & Mahaut-Smith, M. (eds.). p. 91-100 10 p. (Methods in Molecular Biology; vol. 788).

Research output: Chapter in Book/Report/Conference proceedingChapter

35 Scopus citations
2011

Monte Carlo modeling of light transport in tissue (Steady state and time of flight)

Jacques, S. L., Dec 1 2011, Optical-Thermal Response of Laser-Irradiated Tissue. Springer Netherlands, p. 109-144 36 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

31 Scopus citations
2010

Automation in Single-Particle Electron Microscopy. Connecting the Pieces

Lyumkis, D., Moeller, A., Cheng, A., Herold, A., Hou, E., Irving, C., Jacovetty, E. L., Lau, P. W., Mulder, A. M., Pulokas, J., Quispe, J. D., Voss, N. R., Potter, C. S. & Carragher, B., 2010, Methods in Enzymology. C ed. Academic Press Inc., p. 291-338 48 p. (Methods in Enzymology; vol. 483, no. C).

Research output: Chapter in Book/Report/Conference proceedingChapter

19 Scopus citations

Fluorescent molecular imaging and dosimetry tools in photodynamic therapy

Pogue, B. W., Samkoe, K. S., Gibbs-Strauss, S. L. & Davis, S. C., Dec 1 2010, Photodynamic Therapy: Methods and Protocols. p. 207-222 16 p. (Methods in Molecular Biology; vol. 635).

Research output: Chapter in Book/Report/Conference proceedingChapter

8 Scopus citations

Nanostructured Materials for Selective Collection of Trace-Level Metals from Aqueous Systems

Fontenot, S. A., Carter, T. G., Johnson, D. W., Addleman, R. S., Warner, M. G., Yantasee, W., Warner, C. L., Fryxell, G. E. & Bays, J. T., Sep 6 2010, Trace Analysis with Nanomaterials. Wiley-VCH, p. 191-221 31 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Scopus citations
2009

Chapter 2 Quantifying Uncertainty and Sampling Quality in Biomolecular Simulations

Grossfield, A. & Zuckerman, D. M., Sep 3 2009, Annual Reports in Computational Chemistry. Wheeler, R. (ed.). p. 23-48 26 p. (Annual Reports in Computational Chemistry; vol. 5).

Research output: Chapter in Book/Report/Conference proceedingChapter

172 Scopus citations

Thrombin: Structure, functions, and regulation

Cera, E. D. & Gruber, A., Jan 1 2009, Thrombin: Physiology and Disease. Springer US, p. 1-18 18 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Scopus citations
2008

Cancer Genomics

Spellman, P. T., Costello, J. F. & Gray, J. W., Dec 1 2008, The Molecular Basis of Cancer. Elsevier Inc., p. 267-282 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2007

A historical perspective of template-based protein structure prediction

Guo, J. T., Ellrott, K. & Xu, Y., Oct 5 2007, Protein Structure Prediction, Second Edition. Zaki, M. J. & Bystroff, C. (eds.). p. 3-42 40 p. (Methods in Molecular Biology; vol. 413).

Research output: Chapter in Book/Report/Conference proceedingChapter

13 Scopus citations
2006

Alveolar Surface Mechanics

Hall, S. B. & Rugonyi, S., Jan 1 2006, Encyclopedia of Respiratory Medicine, Four-Volume Set. Elsevier Inc., p. 101-106 6 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2003

Effect of viscosity and compression rate on the collapse phase transition of pulmonary surfactant at an air-water interface

Rugonyi, S., Smith, E. C. & Hall, S. B., Jun 2 2003, Computational Fluid and Solid Mechanics 2003. Elsevier Inc., p. 1797-1800 4 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations