Research Output per year
Research Output 1978 2020
- 1 - 50 out of 1,174 results
- Publication Year, Title (descending)
Cyclic Multiplexed-Immunofluorescence (cmIF), a Highly Multiplexed Method for Single-Cell Analysis
Eng, J., Thibault, G., Luoh, S-W., Gray, J., Chang, Y. H. & Chin, K-Y., Jan 1 2020, In : Methods in molecular biology (Clifton, N.J.). 2055, p. 521-562 42 p.Research output: Contribution to journal › Article
3D-Imaging of Whole Neuronal and Vascular Networks of the Human Dental Pulp via CLARITY and Light Sheet Microscopy
França, C. M., Riggers, R., Muschler, J., Widbiller, M., Lococo, P. M., Diogenes, A. & Bertassoni, L., Dec 1 2019, In : Scientific Reports. 9, 1, 10860.Research output: Contribution to journal › Article
Adaptive Control of an Artificial Pancreas Using Model Identification, Adaptive Postprandial Insulin Delivery, and Heart Rate and Accelerometry as Control Inputs
Resalat, N., Hilts, W., Youssef, J. E., Tyler, N., Castle, J. R. & Jacobs, P. G., Jan 1 2019, In : Journal of Diabetes Science and Technology. 13, 6, p. 1044-1053 10 p.Research output: Contribution to journal › Article
Adaptive tuning of basal and bolus insulin to reduce postprandial hypoglycemia in a hybrid artificial pancreas
Resalat, N., El Youssef, J., Reddy, R., Castle, J. & Jacobs, P., Aug 1 2019, In : Journal of Process Control. 80, p. 247-254 8 p.Research output: Contribution to journal › Article
A mechanism for hereditary angioedema with normal C1 inhibitor: an inhibitory regulatory role for the factor XII heavy chain
Ivanov, I., Matafonov, A., Sun, M. F., Mohammed, B. M., Cheng, Q., Dickeson, S. K., Kundu, S., Verhamme, I. M., Gruber, A., McCrae, K. & Gailani, D., Mar 7 2019, In : Blood. 133, 10, p. 1152-1163 12 p.Research output: Contribution to journal › Article
Annot: A Django-based sample, reagent, and experiment metadata tracking system
Bucher, E., Claunch, C. J., Hee, D., Smith, R. L., Devlin, K., Thompson, W., Korkola, J. E. & Heiser, L. M., Nov 1 2019, In : BMC bioinformatics. 20, 1, 542.Research output: Contribution to journal › Article
A non-circulating pool of factor XI associated with glycosaminoglycans in mice
Mohammed, B. M., Cheng, Q., Matafonov, A., Verhamme, I. M., Emsley, J., McCrae, K. R., McCarty, O., Gruber, A. & Gailani, D., Jan 1 2019, In : Journal of Thrombosis and Haemostasis.Research output: Contribution to journal › Article
Antithrombotic Strategies After Bioprosthetic Aortic Valve Replacement: A Systematic Review
Papak, J., Chiovaro, J., Noelck, N., Healy, L. D., Freeman, M., Quin, J. A., Paynter, R., Low, A., Kondo, K., McCarty, O. & Kansagara, D., Jan 1 2019, In : Annals of Thoracic Surgery.Research output: Contribution to journal › Review article
A prospective prediction tool for understanding Crimean–Congo haemorrhagic fever dynamics in Turkey
Ak, Ergönül & Gonen, M., Jan 1 2019, In : Clinical Microbiology and Infection.Research output: Contribution to journal › Article
Artificial Intelligence in Radiation Oncology
Deig, C. R., Kanwar, A. & Thompson, R., Jan 1 2019, (Accepted/In press) In : Hematology/Oncology Clinics of North America.Research output: Contribution to journal › Review article
Assessment of human pancreas cancer tissue and precursor lesions via a fluorophore with inherent PDAC selectivity
Munhenzva, I. R., Barth, C. W., Sibrian-Vazquez, M., Wang, L. G., Escobedo, J. O., Gibbs, S. & Strongin, R. M., Jan 1 2019, In : Methods.Research output: Contribution to journal › Article
Assessment of neonatal, cord, and adult platelet granule trafficking and secretion
Ngo, A. T. P., Sheriff, J., Rocheleau, A. D., Bucher, M., Jones, K. R., Sepp, A. L. I., Malone, L. E., Zigomalas, A., Maloyan, A., Bahou, W. F., Bluestein, D., McCarty, O. & Haley, K., Jan 1 2019, In : Platelets.Research output: Contribution to journal › Article
A statistical virtual patient population for the glucoregulatory system in type 1 diabetes with integrated exercise model
Resalat, N., El Youssef, J., Tyler, N., Castle, J. & Jacobs, P., Jan 1 2019, In : PloS one. 14, 7, e0217301.Research output: Contribution to journal › Article
BET bromodomain inhibition blocks the function of a critical AR-independent master regulator network in lethal prostate cancer
Coleman, D. J., Gao, L., King, C. J., Schwartzman, J., Urrutia, J., Sehrawat, A., Tayou, J., Balter, A., Burchard, J., Chiotti, K. E., Derrick, D. S., Sun, D., Xia, Z., Heiser, L. & Alumkal, J., Jan 1 2019, In : Oncogene.Research output: Contribution to journal › Article
Biomimetic modification of poly(vinyl alcohol): Encouraging endothelialization and preventing thrombosis with antiplatelet monotherapy
Anderson, D. E. J., Truong, K. P., Hagen, M. W., Yim, E. K. F. & Hinds, M., Jan 1 2019, (Accepted/In press) In : Acta Biomaterialia.Research output: Contribution to journal › Article
Cancer-associated mutations in DICER1 RNase IIIa and IIIb domains exert similar effects on miRNA biogenesis
Vedanayagam, J., Chatila, W. K., Aksoy, B. A., Majumdar, S., Skanderup, A. J., Demir, E., Schultz, N., Sander, C. & Lai, E. C., Dec 1 2019, In : Nature communications. 10, 1, 3682.Research output: Contribution to journal › Article
Computational Estimation of Microsecond to Second Atomistic Folding Times
Adhikari, U., Mostofian, B., Copperman, J., Subramanian, S. R., Petersen, A. A. & Zuckerman, D., Apr 24 2019, In : Journal of the American Chemical Society. 141, 16, p. 6519-6526 8 p.Research output: Contribution to journal › Article
Contact Activation Inhibitor and Factor XI Antibody, AB023, Produces Safe, Dose-Dependent Anticoagulation in a Phase 1 First-In-Human Trial
Lorentz, C. U., Verbout, N. G., Wallisch, M., Hagen, M. W., Shatzel, J. J., Olson, S. R., Puy, C., Hinds, M., McCarty, O., Gailani, D., Gruber, A. & Tucker, E., Apr 1 2019, In : Arteriosclerosis, thrombosis, and vascular biology. 39, 4, p. 799-809 11 p.Research output: Contribution to journal › Article
Contact system sends defensins to the rescue
Healy, L. D. & McCarty, O., Jan 31 2019, In : Blood. 133, 5, p. 385-386 2 p.Research output: Contribution to journal › Review article
Correlating thrombus constituents of surface-modified vascular graft materials to luminal volume using microct to better quantify clinical functionality
Anderson, D. E. J., Gupta, A. & Hinds, M., Jan 1 2019, Society for Biomaterials Annual Meeting and Exposition 2019: The Pinnacle of Biomaterials Innovation and Excellence - Transactions of the 42nd Annual Meeting. Society for Biomaterials, 1 p. (Transactions of the Annual Meeting of the Society for Biomaterials and the Annual International Biomaterials Symposium; vol. 40).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
Design and evaluation of a non-contact bed-mounted sensing device for automated in-home detection of obstructive sleep apnea: A pilot study
Mosquera-Lopez, C., Leitschuh, J., Condon, J., Hagen, C., Rajhbeharrysingh, U., Hanks, C. & Jacobs, P., Sep 1 2019, In : Biosensors. 9, 3, 90.Research output: Contribution to journal › Article
Diagnostic performance of receptor-specific surgical specimen staining correlates with receptor expression level
Schaefer, J. M., Barth, C. W., Davis, S. C. & Gibbs, S., Feb 1 2019, In : Journal of biomedical optics. 24, 2, p. 1-9 9 p.Research output: Contribution to journal › Article
Early Prediction of Breast Cancer Therapy Response using Multiresolution Fractal Analysis of DCE-MRI Parametric Maps
Machireddy, A., Thibault, G., Tudorica, L. A., Afzal, A., Mishal, M., Kemmer, K., Naik, A., Troxell, M., Goranson, E., Oh, K., Roy, N., Jafarian, N., Holtorf, M., Huang, W. & Song, X., Mar 1 2019, In : Tomography (Ann Arbor, Mich.). 5, 1, p. 90-98 9 p.Research output: Contribution to journal › Article
Endothelial PAI-1 (Plasminogen Activator Inhibitor-1) Blocks the Intrinsic Pathway of Coagulation, Inducing the Clearance and Degradation of FXIa (Activated Factor XI)
Puy, C., Ngo, A. T. P., Pang, J., Keshari, R. S., Hagen, M. W., Hinds, M., Gailani, D., Gruber, A., Lupu, F. & McCarty, O., Jul 1 2019, In : Arteriosclerosis, thrombosis, and vascular biology. 39, 7, p. 1390-1401 12 p.Research output: Contribution to journal › Article
Erratum: Correction: FGF2-FGFR1 signaling regulates release of leukemia-protective exosomes from bone marrow stromal cells (eLife (2019) 8 PII: e47174)
Javidi-Sharifi, N., Martinez, J., English, I., Joshi, S. K., Scopim-Ribeiro, R., Viola, S. K., Edwards, D. K., Agarwal, A., Lopez, C., Jorgens, D., Tyner, J., Druker, B. & Traer, E., Mar 29 2019, In : eLife. 8Research output: Contribution to journal › Comment/debate
Erratum: Modeling subdiffusive light scattering by incorporating the tissue phase function and detector numerical aperture (Journal of Biomedical Optics (2017) 22:5 (050501) DOI: 10.1117/1.JBO.22.5.050501)
Post, A. L., Jacques, S., Sterenborg, H. J. C. M., Faber, D. J. & Van Leeuwen, T. G., Jun 30 2019, In : Journal of biomedical optics. 24, 6, 069801.Research output: Contribution to journal › Comment/debate
Few-shot hypercolumn-based mitochondria segmentation in cardiac and outer hair cells in focused ion beam-scanning electron microscopy (FIB-SEM) data
Dietlmeier, J., McGuinness, K., Rugonyi, S., Wilson, T., Nuttall, A. & O'Connor, N. E., Dec 1 2019, In : Pattern Recognition Letters. 128, p. 521-528 8 p.Research output: Contribution to journal › Article
FGF2-FGFR1 signaling regulates release of Leukemia-Protective exosomes from bone marrow stromal cells
Javidi-Sharifi, N., Martinez, J., English, I., Joshi, S. K., Scopim-Ribiero, R., Edwards, D. K., Agarwal, A., Lopez, C., Jorgens, D., Tyner, J., Druker, B. & Traer, E., Feb 5 2019, In : eLife. 8Research output: Contribution to journal › Article
Fondaparinux pentasaccharide reduces sepsis coagulopathy and promotes survival in the baboon model of Escherichia coli sepsis
Keshari, R. S., Silasi, R., Popescu, N. I., Georgescu, C., Chaaban, H., Lupu, C., McCarty, O. J. T., Esmon, C. T. & Lupu, F., Jan 1 2019, (Accepted/In press) In : Journal of Thrombosis and Haemostasis.Research output: Contribution to journal › Article
Full-Length P2X7 Structures Reveal How Palmitoylation Prevents Channel Desensitization
McCarthy, A. E., Yoshioka, C. & Mansoor, S. E., Oct 17 2019, In : Cell. 179, 3, p. 659-670.e13Research output: Contribution to journal › Article
G-OnRamp: A Galaxy-based platform for collaborative annotation of eukaryotic genomes
Liu, Y., Sargent, L., Leung, W., Elgin, S. C. R. & Goecks, J., Nov 1 2019, In : Bioinformatics. 35, 21, p. 4422-4423 2 p.Research output: Contribution to journal › Article
GRB7 dependent proliferation of basal-like, HER-2 positive human breast cancer cell lines is mediated in part by HER-1 signaling
Luoh, S-W., Wagoner, W., Wang, X., Hu, Z., Lai, X., Chin, K-Y., Sears, R. & Ramsey, E., Jan 1 2019, In : Molecular Carcinogenesis.Research output: Contribution to journal › Article
Hepatic thrombopoietin gene silencing reduces platelet count and breast cancer progression in transgenic MMTV-PyMT mice
Shirai, T., Revenko, A. S., Tibbitts, J., Ngo, A. T. P., Mitrugno, A., Healy, L. D., Johnson, J., Tucker, E. I., Hinds, M. T., Coussens, L. M., McCarty, O. J. T., Monia, B. P. & Gruber, A., Oct 22 2019, In : Blood Advances. 3, 20, p. 3080-3091 12 p.Research output: Contribution to journal › Article
High-dimensional multiplexed immunohistochemical characterization of immune contexture in human cancers
Banik, G., Betts, C. B., Liudahl, S. M., Sivagnanam, S., Kawashima, R., Cotechini, T., Larson, W., Goecks, J., Pai, S. I., Clayburgh, D., Tsujikawa, T. & Coussens, L. M., Jan 1 2019, Methods in Enzymology. Academic Press Inc., (Methods in Enzymology).Research output: Chapter in Book/Report/Conference proceeding › Chapter
Identification, Quantification, and System Analysis of Protein N-ε Lysine Methylation in Anucleate Blood Platelets
Rocheleau, A. D., Melrose, A. R., Cunliffe, J. M., Klimek, J., Babur, O., Tassi Yunga, S., Ngo, A. T. P., Pang, J., David, L., McCarty, O. & Aslan, J., Jan 1 2019, In : Proteomics. 1900001.Research output: Contribution to journal › Article
Identification of SERPINE1 as a regulator of glioblastoma cell dispersal with transcriptome profiling
Seker, F., Cingoz, A., Sur-Erdem, İ., Erguder, N., Erkent, A., Uyulur, F., Selvan, M. E., Gümüş, Z. H., Gönen, M., Bayraktar, H., Wakimoto, H. & Bagci-Onder, T., Nov 2019, In : Cancers. 11, 11, 1651.Research output: Contribution to journal › Article
Inhibition of contact-mediated activation of factor XI protects baboons against S aureus-induced organ damage and death
Silasi, R., Keshari, R. S., Lupu, C., Van Rensburg, W. J., Chaaban, H., Regmi, G., Shamanaev, A., Shatzel, J. J., Puy, C., Lorentz, C. U., Tucker, E., Gailani, D., Gruber, A., McCarty, O. & Lupu, F., Feb 26 2019, In : Blood advances. 3, 4, p. 658-669 12 p.Research output: Contribution to journal › Article
Integrated Analysis of TP53 Gene and Pathway Alterations in The Cancer Genome Atlas
The Cancer Genome Atlas Network, Jul 30 2019, In : Cell Reports. 28, 5, p. 1370-1384.e5Research output: Contribution to journal › Article
Lanthanide-Loaded Nanoparticles as Potential Fluorescent and Mass Probes for High-Content Protein Analysis
Ngamcherdtrakul, W., Sangvanich, T., Goodyear, S., Reda, M., Gu, S., Castro, D. J., Punnakitikashem, P. & Yantasee, W., Mar 1 2019, In : Bioengineering. 6, 1, 23.Research output: Contribution to journal › Article
Luminal plasma treatment for small diameter polyvinyl alcohol tubular scaffolds
Pohan, G., Chevallier, P., Anderson, D. E. J., Tse, J. W., Yao, Y., Hagen, M. W., Mantovani, D., Hinds, M. & Yim, E. K. F., Jan 1 2019, In : Frontiers in Bioengineering and Biotechnology. 7, MAY, 117.Research output: Contribution to journal › Article
Maintenance of MYC expression promotes de novo resistance to BET bromodomain inhibition in castration-resistant prostate cancer
Coleman, D. J., Gao, L., Schwartzman, J., Korkola, J., Sampson, D., Derrick, D. S., Urrutia, J., Balter, A., Burchard, J., King, C. J., Chiotti, K. E., Heiser, L. & Alumkal, J., Dec 1 2019, In : Scientific Reports. 9, 1, 3823.Research output: Contribution to journal › Article
Mechanism of pharmacochaperoning in a mammalian KATP channel revealed by cryo-EM
Martin, G. M., Sung, M. W., Yang, Z., Innes, L. M., Kandasamy, B., David, L., Yoshioka, C. & Shyng, S-L., Jul 1 2019, In : eLife. 8, e46417.Research output: Contribution to journal › Article
Meiotic cellular rejuvenation is coupled to nuclear remodeling in budding yeast
King, G. A., Goodman, J. S., Schick, J. G., Chetlapalli, K., Jorgens, D., McDonald, K. L. & Ünal, E., Aug 9 2019, In : eLife. 8Research output: Contribution to journal › Article
Methodology for Detecting and Tracking Brain-Derived Neurotrophic Factor Complexes in Neurons Using Single Quantum Dots
Vermehren-Schmaedick, A., Jacob, T. & Vu, T. T., Jan 1 2019, Neuromethods. Humana Press Inc., p. 105-118 14 p. (Neuromethods; vol. 143).Research output: Chapter in Book/Report/Conference proceeding › Chapter
Middle-way flexible docking: Pose prediction using mixed-resolution Monte Carlo in estrogen receptor α
Spiriti, J., Subramanian, S. R., Palli, R., Wu, M. & Zuckerman, D., Apr 1 2019, In : PloS one. 14, 4, e0215694.Research output: Contribution to journal › Article
Modeling the effect of blood vessel bifurcation ratio on occlusive thrombus formation
Lakshmanan, H. H. S., Shatzel, J. J., Olson, S. R., McCarty, O. & Maddala, J., Jan 1 2019, In : Computer Methods in Biomechanics and Biomedical Engineering.Research output: Contribution to journal › Article
Modeling Tumor Phenotypes In Vitro with Three-Dimensional Bioprinting
Langer, E. M., Allen-Petersen, B. L., King, S. M., Kendsersky, N. D., Turnidge, M. A., Kuziel, G. M., Riggers, R., Samatham, R., Amery, T. S., Jacques, S., Sheppard, B., Korkola, J., Muschler, J., Thibault, G., Chang, Y. H., Gray, J., Presnell, S. C., Nguyen, D. G. & Sears, R., Jan 15 2019, In : Cell Reports. 26, 3, p. 608-623.e6Research output: Contribution to journal › Article
Nudt21 regulates the alternative polyadenylation of Pak1 and is predictive in the prognosis of glioblastoma patients
Chu, Y., Elrod, N., Wang, C., Li, L., Chen, T., Routh, A., Xia, Z., Li, W., Wagner, E. J. & Ji, P., Jan 1 2019, In : Oncogene.Research output: Contribution to journal › Article
Optical properties of living corals determined with diffuse reflectance spectroscopy
Jacques, S., Wangpraseurt, D. & Kühl, M., Jan 1 2019, In : Frontiers in Marine Science. 6, JUL, 472.Research output: Contribution to journal › Article
Patient Input for Design of a Decision Support Smartphone Application for Type 1 Diabetes
Wilson, L. M., Tyler, N., Jacobs, P., Gabo, V., Senf, B., Reddy, R. & Castle, J., Jan 1 2019, (Accepted/In press) In : Journal of Diabetes Science and Technology.Research output: Contribution to journal › Article