Research Output

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Letter
2020

In Regard to Wallner et al

Kang, J., Thompson, R. F., Fuller, C. D., Camphausen, K. A., Gabriel, P. E. & Thomas, C. R., Jan 1 2020, In : International Journal of Radiation Oncology Biology Physics. 106, 1, p. 217-218 2 p.

Research output: Contribution to journalLetter

Open Access
2019

Tumor Mutation Burden - From Doubts to Concerns

Wood, M. A., Nellore, A. & Thompson, R. F., Jan 1 2019, (Accepted/In press) In : JAMA Oncology.

Research output: Contribution to journalLetter

2018

Methodological problems in a study of fetal visual perception

Scheel, A. M., Ritchie, S. J., Brown, N. J. L. & Jacques, S. L., May 21 2018, In : Current Biology. 28, 10, p. R594-R596

Research output: Contribution to journalLetter

3 Scopus citations
2017

Reproducible RNA-seq analysis using recount2

Collado-Torres, L., Nellore, A., Kammers, K., Ellis, S. E., Taub, M. A., Hansen, K. D., Jaffe, A. E., Langmead, B. & Leek, J. T., Apr 11 2017, In : Nature Biotechnology. 35, 4, p. 319-321 3 p.

Research output: Contribution to journalLetter

74 Scopus citations
2015

A resident's perspective on global health rotations in radiation oncology

Thompson, R. F. & Grover, S., Dec 1 2015, In : International Journal of Radiation Oncology Biology Physics. 93, 5, p. 1165-1166 2 p.

Research output: Contribution to journalLetter

2 Scopus citations

The effect of corn trypsin inhibitor and inhibiting antibodies for FXIa and FXIIa on coagulation of plasma and whole blood: Comment

Parunov, L. A., Surov, S. S., Tucker, E. & Ovanesov, M. V., Aug 1 2015, In : Journal of Thrombosis and Haemostasis. 13, 8, p. 1527-1530 4 p.

Research output: Contribution to journalLetter

Open Access
3 Scopus citations
2014

Dissemination of scientific software with Galaxy ToolShed

Blankenberg, D., Von Kuster, G., Bouvier, E., Baker, D., Afgan, E., Stoler, N., Taylor, J., Nekrutenko, A., Clements, D., Coraor, N., Eberhard, C., Francheteau, D., Goecks, J., Guerler, S., Jackson, J., Cooke, I., Johnson, J., Kirton, E., Cock, P., Chapman, B. & 2 others, Grüning, B. & Lazarus, R., Feb 20 2014, In : Genome biology. 15, 2, 403.

Research output: Contribution to journalLetter

86 Scopus citations

Immobilization of Actively Thromboresistant Assemblies on Sterile Blood-Contacting Surfaces

Qu, Z., Krishnamurthy, V., Haller, C. A., Dorr, B. M., Marzec, U. M., Hurst, S., Hinds, M. T., Hanson, S. R., Liu, D. R. & Chaikof, E. L., Jan 2014, In : Advanced Healthcare Materials. 3, 1, p. 30-35 6 p.

Research output: Contribution to journalLetter

23 Scopus citations

Reply to Colorectal cancer classification based on gene expression is not associated with FOLFIRI response

Sadanandam, A., Gray, J. & Hanahan, D., Nov 1 2014, In : Nature medicine. 20, 11, p. 1231-1232 2 p.

Research output: Contribution to journalLetter

4 Scopus citations
2013

Accelerating 3B single-molecule super-resolution microscopy with cloud computing

Hu, Y. S., Nan, X., Sengupta, P., Lippincott-Schwartz, J. & Cang, H., Feb 1 2013, In : Nature Methods. 10, 2, p. 96-97 2 p.

Research output: Contribution to journalLetter

33 Scopus citations
2012

NGS analyses by visualization with Trackster

Goecks, J., Coraor, N., Nekrutenko, A. & Taylor, J., Nov 1 2012, In : Nature biotechnology. 30, 11, p. 1036-1039 4 p.

Research output: Contribution to journalLetter

25 Scopus citations
2011

Kernels for longitudinal data with variable sequence length and sampling intervals

Lu, Z., Leen, T. K. & Kaye, J., Sep 1 2011, In : Neural Computation. 23, 9, p. 2390-2420 31 p.

Research output: Contribution to journalLetter

1 Scopus citations
2010

Evidence against a protein in plasma that is a product of a factor XI mRNA splice variant missing exons 6 and 7

Gailani, D., Sun, M. F., Cheng, Q., Matafonov, A., Tucker, E. I., Gruber, A. & Emsley, J., Aug 19 2010, In : Blood. 116, 7, p. 1185-1186 2 p.

Research output: Contribution to journalLetter

2 Scopus citations
2008

ESR1 gene amplification in breast cancer: A common phenomenon? [1]

Brown, L. A., Hoog, J., Chin, S. F., Tao, Y., Zayed, A. A., Chin, K., Teschendorff, A. E., Quackenbush, J. F., Marioni, J. C., Leung, S., Perou, C. M., Neilsen, T. O., Ellis, M., Gray, J. W., Bernard, P. S., Huntsman, D. G. & Caldas, C., Jul 1 2008, In : Nature genetics. 40, 7, p. 806-807 2 p.

Research output: Contribution to journalLetter

48 Scopus citations

Interaction between thrombin mutant W215A/E217A and direct thrombin inhibitor

Tanaka, K. A., Gruber, A., Szlam, F., Bush, L. A., Hanson, S. R. & Di Cera, E., Jul 1 2008, In : Blood Coagulation and Fibrinolysis. 19, 5, p. 465-468 4 p.

Research output: Contribution to journalLetter

2 Scopus citations
2007

Atypical breakpoints generating mosaic interstitial duplication and triplication of chromosome 15q11-q13 [5]

Parokonny, A. S., Wang, N. J., Driscoll, J., Cuccaro, M., Wolpert, C., Malone, B. M. & Schanen, N. C., Oct 15 2007, In : American Journal of Medical Genetics, Part A. 143, 20, p. 2473-2477 5 p.

Research output: Contribution to journalLetter

2001

Integration of cytogenetic landmarks into the draft sequence of the human genome

Cheung, V. G., Nowak, N., Jang, W., Kirsch, I. R., Zhao, S., Chen, X. N., Furey, T. S., Kim, U. J., Kuo, W. L., Olvier, M., Conroy, J., Kasprzyk, A., Massa, H., Yonescu, R., Sait, S., Thoreen, C., Snijders, A., Lemyre, E., Bailey, J. A., Bruzel, A. & 40 others, Burrill, W. D., Clegg, S. M., Collins, S., Dhami, P., Friedman, C., Han, C. S., Herrick, S., Lee, J., Ligon, A. H., Lowry, S., Moriey, M., Narasimhan, S., Osoegawa, K., Peng, Z., Plajzer-Frick, I., Quade, B. J., Scott, D., Sirotkin, K., Thorpe, A. A., Gray, J. W., Hudson, J., Pinkel, D., Ried, T., Rowen, L., Shen-Ong, G. L., Strausberg, R. L., Birney, E., Callen, D. F., Cheng, J. F., Cox, D. R., Doggett, N. A., Carter, N. P., Eichler, E. E., Haussler, D., Korenberg, J. R., Morton, C. C., Albertson, D., Schuler, G., De Jong, P. J. & Trask, B. J., Feb 15 2001, In : Nature. 409, 6822, p. 953-958 6 p.

Research output: Contribution to journalLetter

238 Scopus citations
1996

Noise in human muscle spindles [6]

Cordo, P., Ingils, J. T., Verschueren, S., Collins, J. J., Merfeld, D. M., Rosenblum, S., Buckley, S. & Moss, F., Nov 15 1996, In : Nature. 383, 6603, p. 769-770 2 p.

Research output: Contribution to journalLetter

234 Scopus citations
1995

In Vivo Fluorescence Spectroscopy and Imaging of Human Skin Tumors

STERENBORG, H. J. C. M., THOMSEN, S., JACQUES, S. L., DUVIC, M., MOTAMEDI, M. & WAGNER, R. F., Sep 1995, In : Dermatologic Surgery. 21, 9, p. 821-822 2 p.

Research output: Contribution to journalLetter

22 Scopus citations
1994

Optimized radial and angular positions in Monte Carlo modeling

Wana, L. & Jacaues, S. L., Jul 1994, In : Medical Physics. 21, 7, p. 1081-1083 3 p.

Research output: Contribution to journalLetter

33 Scopus citations
1993

Hyperventilation-induced cerebral ischemia in panic disorder [13]

Hesselink, J. M. K., Mathew, R. J. & Gibbs, D. M., Jan 1 1993, In : American Journal of Psychiatry. 150, 10, p. 1567-1568 2 p.

Research output: Contribution to journalLetter

2 Scopus citations