Model-guided microarray implicates the retromer complex in Alzheimer's disease

Scott A. Small, Kelly Kent, Aimee Pierce, Conrad Leung, Min Suk Kang, Hirokazu Okada, Lawrence Honig, Jean Paul Vonsattel, Tae Wan Kim

Research output: Contribution to journalArticle

234 Scopus citations

Abstract

Although, in principle, gene expression profiling is well suited to isolate pathogenic molecules associated with Alzheimer's disease (AD), techniques such as microarray present unique analytic challenges when applied to disorders of the brain. Here, we addressed these challenges by first constructing a spatiotemporal model, predicting a priori how a molecule underlying AD should behave anatomically and over time. Then, guided by the model, we generated gene expression profiles of the entorhinal cortex and the dentate gyrus, harvested from the brains of AD cases and controls covering a broad age span. Among many expression differences, the retromer trafficking molecule VPS35 best conformed to the spatiotemporal model of AD. Western blotting confirmed the abnormality, establishing that VPS35 levels are reduced in brain regions selectively vulnerable to AD. VPS35 is the core molecule of the retromer trafficking complex and further analysis revealed that VPS26, another member of the complex, is also downregulated in AD. Cell culture studies, using small interfering RNAs or expression vectors, showed that VPS35 regulates Aβ peptide levels, establishing the relevance of the retromer complex to AD. Reviewing our findings in the context of recent studies suggests how downregulation of the retromer complex in AD can regulate local levels of Aβ peptide.

Original languageEnglish (US)
Pages (from-to)909-919
Number of pages11
JournalAnnals of Neurology
Volume58
Issue number6
DOIs
StatePublished - Dec 1 2005

ASJC Scopus subject areas

  • Neurology
  • Clinical Neurology

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    Small, S. A., Kent, K., Pierce, A., Leung, C., Kang, M. S., Okada, H., Honig, L., Vonsattel, J. P., & Kim, T. W. (2005). Model-guided microarray implicates the retromer complex in Alzheimer's disease. Annals of Neurology, 58(6), 909-919. https://doi.org/10.1002/ana.20667