Emek Demir

Assistant Professor

  • 2560 Citations
  • 19 h-Index

Research output per year

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Research Output

  • 2560 Citations
  • 19 h-Index
  • 33 Article
  • 3 Comment/debate
  • 3 Review article
  • 1 Conference article

Pathway Commons 2019 Update: integration, analysis and exploration of pathway data

Rodchenkov, I., Babur, O., Luna, A., Aksoy, B. A., Wong, J. V., Fong, D., Franz, M., Siper, M. C., Cheung, M., Wrana, M., Mistry, H., Mosier, L., Dlin, J., Wen, Q., O'Callaghan, C., Li, W., Elder, G., Smith, P. T., Dallago, C., Cerami, E. & 5 others, Gross, B., Dogrusoz, U., Demir, E., Bader, G. D. & Sander, C., Jan 8 2020, In : Nucleic acids research. 48, D1, p. D489-D497

Research output: Contribution to journalArticle

Open Access
  • Cancer-associated mutations in DICER1 RNase IIIa and IIIb domains exert similar effects on miRNA biogenesis

    Vedanayagam, J., Chatila, W. K., Aksoy, B. A., Majumdar, S., Skanderup, A. J., Demir, E., Schultz, N., Sander, C. & Lai, E. C., Dec 1 2019, In : Nature communications. 10, 1, 3682.

    Research output: Contribution to journalArticle

    Open Access
  • 2 Scopus citations

    Systems Biology Graphical Notation: Process Description language Level 1 Version 2.0

    Rougny, A., Touré, V., Moodie, S., Balaur, I., Czauderna, T., Borlinghaus, H., Dogrusoz, U., Mazein, A., Dräger, A., Blinov, M. L., Villéger, A., Haw, R., Demir, E., Mi, H., Sorokin, A., Schreiber, F. & Luna, A., Jun 13 2019, In : Journal of integrative bioinformatics. 16, 2

    Research output: Contribution to journalReview article

    Open Access
  • Large-scale automated machine reading discovers new cancer-driving mechanisms

    Valenzuela-Escárcega, M. A., Babur, Ö., Hahn-Powell, G., Bell, D., Hicks, T., Noriega-Atala, E., Wang, X., Surdeanu, M., Demir, E. & Morrison, C. T., Jan 1 2018, In : Database. 2018, 2018

    Research output: Contribution to journalArticle

  • 4 Scopus citations

    Platelet procoagulant phenotype is modulated by a p38-MK2 axis that regulates RTN4/Nogo proximal to the endoplasmic reticulum: utility of pathway analysis

    Babur, O., Ngo, A. T. P., Rigg, R. A., Pang, J., Rub, Z. T., Buchanan, A. E., Mitrugno, A., David, L., McCarty, O., Demir, E. & Aslan, J., May 1 2018, In : American journal of physiology. Cell physiology. 314, 5, p. C603-C615

    Research output: Contribution to journalArticle

  • 3 Scopus citations