Emek Demir

Assistant Professor

  • 1758 Citations
  • 14 h-Index
20022017

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  • 4 Similar Profiles
Pathway Mathematics
Software Medicine & Life Sciences
Language Medicine & Life Sciences
Databases Medicine & Life Sciences
Proteins Medicine & Life Sciences
Systems Biology Medicine & Life Sciences
Visualization Chemical Compounds
Neoplasms Medicine & Life Sciences

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Research Output 2002 2017

  • 1758 Citations
  • 14 h-Index
  • 34 Article
  • 1 Conference contribution

Assessment of roles for the rho-specific guanine nucleotide dissociation inhibitor Ly-GDI in platelet function: A spatial systems approach

Ngo, A. T. P., Thierheimer, M. L. D., Babur, Ö., Rocheleau, A. D., Huang, T., Pang, J., Rigg, R. A., Mitrugno, A., Theodorescu, D., Burchard, J., Nan, X., Demir, E., McCarty, O. J. T. & Aslan, J. E. Apr 7 2017 In : American Journal of Physiology - Cell Physiology. 312, 4, p. C527-C536

Research output: Research - peer-reviewArticle

rho-Specific Guanine Nucleotide Dissociation Inhibitors
Guanine Nucleotide Dissociation Inhibitors
Systems Analysis
Blood Platelets
Protein Kinase C

Collaborative workspaces for pathway curation

Durupinar-Babur, F., Siper, M. C., Dogrusoz, U., Bahceci, I., Babur, O. & Demir, E. 2016 In : CEUR Workshop Proceedings. 1747

Research output: Research - peer-reviewArticle

Application programming interfaces (API)
49 Citations

Human SRMAtlas: A Resource of Targeted Assays to Quantify the Complete Human Proteome

Kusebauch, U. , Campbell, D. S. , Deutsch, E. W. , Chu, C. S. , Spicer, D. A. , Brusniak, M. Y. , Slagel, J. , Sun, Z. , Stevens, J. , Grimes, B. , Shteynberg, D. , Hoopmann, M. R. , Blattmann, P. , Ratushny, A. V. , Rinner, O. , Picotti, P. , Carapito, C. , Huang, C. Y. , Kapousouz, M. , Lam, H. & 7 others Tran, T., Demir, E., Aitchison, J. D., Sander, C., Hood, L., Aebersold, R. & Moritz, R. L. Jul 28 2016 In : Cell. 166, 3, p. 766-778 13 p.

Research output: Research - peer-reviewArticle

Proteome
Assays
Proteins
Peptides
docetaxel
3 Citations

PaxtoolsR: Pathway analysis in R using Pathway Commons

Luna, A., Babur, Ö., Aksoy, B. A., Demir, E. & Sander, C. Apr 15 2016 In : Bioinformatics. 32, 8, p. 1262-1264 3 p.

Research output: Research - peer-reviewArticle

Pathway
Datasets
Merging
Language
Web Services
9 Citations

Crosstalk between signaling pathways provided by single and multiple protein phosphorylation sites

Nishi, H., Demir, E. & Panchenko, A. R. Jan 30 2015 In : Journal of Molecular Biology. 427, 2, p. 511-520 10 p.

Research output: Research - peer-reviewArticle

Phosphorylation
Proteins
Phosphotransferases
Protein Stability
Computer Simulation