Emek Demir

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Administrative Core
Demir, E., Heiser, L. & Sears, R.
Project: Research project
Comparative analysis between patient-derived models of pancreatic ductal adenocarcinomas and matched tumor specimens
Coussens, L., Demir, E. & Coussens, L.
Project: Research project

47 Article
8 Comment/debate
6 Review article
2 Conference article

An omic and multidimensional spatial atlas from serial biopsies of an evolving metastatic breast cancer
Johnson, B. E., Creason, A. L., Stommel, J. M., Keck, J. M., Parmar, S., Betts, C. B., Blucher, A., Boniface, C., Bucher, E., Burlingame, E., Camp, T., Chin, K., Eng, J., Estabrook, J., Feiler, H. S., Heskett, M. B., Hu, Z., Kolodzie, A., Kong, B. L., Labrie, M., & 26 othersLee, J., Leyshock, P., Mitri, S., Patterson, J., Riesterer, J. L., Sivagnanam, S., Somers, J., Sudar, D., Thibault, G., Weeder, B. R., Zheng, C., Nan, X., Thompson, R., Heiser, L. M., Spellman, P. T., Thomas, G., Demir, E., Chang, Y. H., Coussens, L. M., Guimaraes, A. R., Corless, C., Goecks, J., Bergan, R., Mitri, Z., Mills, G. B. & Gray, J. W., Feb 15 2022, In: Cell Reports Medicine. 3, 2, 100525.
Research output: Contribution to journal › Article › peer-review

Open Access
3 Scopus citations
MITI minimum information guidelines for highly multiplexed tissue images
Human Tumor Atlas Network, Mar 2022, In: Nature Methods. 19, 3, p. 262-267 6 p.
Research output: Contribution to journal › Comment/debate › peer-review

Open Access

4 Scopus citations
The reactome pathway knowledgebase 2022
Gillespie, M., Jassal, B., Stephan, R., Milacic, M., Rothfels, K., Senff-Ribeiro, A., Griss, J., Sevilla, C., Matthews, L., Gong, C., Deng, C., Varusai, T., Ragueneau, E., Haider, Y., May, B., Shamovsky, V., Weiser, J., Brunson, T., Sanati, N., Beckman, L., & 15 othersShao, X., Fabregat, A., Sidiropoulos, K., Murillo, J., Viteri, G., Cook, J., Shorser, S., Bader, G., Demir, E., Sander, C., Haw, R., Wu, G., Stein, L., Hermjakob, H. & D'Eustachio, P., Jan 7 2022, In: Nucleic acids research. 50, D1, p. D687-D692
Research output: Contribution to journal › Article › peer-review

Open Access
26 Scopus citations
2D MXenes with antiviral and immunomodulatory properties: A pilot study against SARS-CoV-2
Unal, M. A., Bayrakdar, F., Fusco, L., Besbinar, O., Shuck, C. E., Yalcin, S., Erken, M. T., Ozkul, A., Gurcan, C., Panatli, O., Summak, G. Y., Gokce, C., Orecchioni, M., Gazzi, A., Vitale, F., Somers, J., Demir, E., Yildiz, S. S., Nazir, H., Grivel, J. C., & 6 othersBedognetti, D., Crisanti, A., Akcali, K. C., Gogotsi, Y., Delogu, L. G. & Yilmazer, A., Jun 2021, In: Nano Today. 38, 101136.
Research output: Contribution to journal › Article › peer-review

Open Access
21 Scopus citations
Analyzing causal relationships in proteomic profiles using CausalPath
Luna, A., Siper, M. C., Korkut, A., Durupinar, F., Dogrusoz, U., Aslan, J. E., Sander, C., Demir, E. & Babur, O., Dec 17 2021, In: STAR Protocols. 2, 4, 100955.
Research output: Contribution to journal › Article › peer-review

Open Access

Emek Demir

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Network

Projects

Administrative Core

Comparative analysis between patient-derived models of pancreatic ductal adenocarcinomas and matched tumor specimens

Research output

An omic and multidimensional spatial atlas from serial biopsies of an evolving metastatic breast cancer

MITI minimum information guidelines for highly multiplexed tissue images

The reactome pathway knowledgebase 2022

2D MXenes with antiviral and immunomodulatory properties: A pilot study against SARS-CoV-2

Analyzing causal relationships in proteomic profiles using CausalPath