What Markov State Models Can and Cannot Do: Correlation versus Path-Based Observables in Protein-Folding Models

Physics & Astronomy

• folding 69%
• proteins 54%
• time lag 10%
• histories 10%
• trajectory analysis 9%
• MSM (semiconductors) 9%
• kinetics 7%
• temporal resolution 6%
• statistical analysis 6%
• spatial resolution 4%
• relaxation time 4%
• molecular dynamics 4%
• life (durability) 4%
• requirements 4%
• configurations 3%
• simulation 2%

Chemical Compounds

• Protein Folding 74%
• Time 24%
• Time Correlation Function 22%
• Correlation Function 17%
• Molecular Dynamics 10%
• Simulation 8%
• Protein 5%

Engineering & Materials Science

• Protein folding 100%
• Biomolecules 8%
• Relaxation time 8%
• Molecular dynamics 6%
• Proteins 5%
• Statistical methods 5%
• Trajectories 4%
• Computer simulation 3%