Visualization techniques for the developing chicken heart

Ly Phan, Cindy Grimm, Sandra Rugonyi

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Citations (Scopus)

Abstract

We present a geometric surface parameterization algorithm and several visualization techniques adapted to the problem of understanding the 4D peristaltic-like motion of the outflow tract (OFT) in an embryonic chick heart. We illustrated the techniques using data from hearts under normal conditions (four embryos), and hearts in which blood flow conditions are altered through OFT banding (four embryos). The overall goal is to create quantitative measures of the temporal heartshape change both within a single subject and between multiple subjects. These measures will help elucidate how altering hemodynamic conditions changes the shape and motion of the OFT walls, which in turn influence the stresses and strains on the developing heart, causing it to develop differently. We take advantage of the tubular shape and periodic motion of the OFT to produce successively lower dimensional visualizations and quantifications of the cardiac motion.

Original languageEnglish (US)
Title of host publicationLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
PublisherSpringer Verlag
Pages35-44
Number of pages10
Volume9474
ISBN (Print)9783319278568
DOIs
StatePublished - 2015
Event11th International Symposium on Advances in Visual Computing, ISVC 2015 - Las Vegas, United States
Duration: Dec 14 2015Dec 16 2015

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume9474
ISSN (Print)03029743
ISSN (Electronic)16113349

Other

Other11th International Symposium on Advances in Visual Computing, ISVC 2015
CountryUnited States
CityLas Vegas
Period12/14/1512/16/15

Fingerprint

Visualization
Embryo
Motion
Periodic Motion
Hemodynamics
Blood Flow
Parameterization
Cardiac
Quantification
Blood
Heart

ASJC Scopus subject areas

  • Computer Science(all)
  • Theoretical Computer Science

Cite this

Phan, L., Grimm, C., & Rugonyi, S. (2015). Visualization techniques for the developing chicken heart. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) (Vol. 9474, pp. 35-44). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 9474). Springer Verlag. https://doi.org/10.1007/978-3-319-27857-5_4

Visualization techniques for the developing chicken heart. / Phan, Ly; Grimm, Cindy; Rugonyi, Sandra.

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 9474 Springer Verlag, 2015. p. 35-44 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 9474).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Phan, L, Grimm, C & Rugonyi, S 2015, Visualization techniques for the developing chicken heart. in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). vol. 9474, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 9474, Springer Verlag, pp. 35-44, 11th International Symposium on Advances in Visual Computing, ISVC 2015, Las Vegas, United States, 12/14/15. https://doi.org/10.1007/978-3-319-27857-5_4
Phan L, Grimm C, Rugonyi S. Visualization techniques for the developing chicken heart. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 9474. Springer Verlag. 2015. p. 35-44. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)). https://doi.org/10.1007/978-3-319-27857-5_4
Phan, Ly ; Grimm, Cindy ; Rugonyi, Sandra. / Visualization techniques for the developing chicken heart. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 9474 Springer Verlag, 2015. pp. 35-44 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).
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