The Zebrafish Information Network

the zebrafish model organism database.

Judy Sprague, Leyla Bayraktaroglu, Dave Clements, Tom Conlin, David Fashena, Ken Frazer, Melissa Haendel, Douglas G. Howe, Prita Mani, Sridhar Ramachandran, Kevin Schaper, Erik Segerdell, Peiran Song, Brock Sprunger, Sierra Taylor, Ceri E. Van Slyke, Monte Westerfield

Research output: Contribution to journalArticle

182 Citations (Scopus)

Abstract

The Zebrafish Information Network (ZFIN; http://zfin.org) is a web based community resource that implements the curation of zebrafish genetic, genomic and developmental data. ZFIN provides an integrated representation of mutants, genes, genetic markers, mapping panels, publications and community resources such as meeting announcements and contact information. Recent enhancements to ZFIN include (i) comprehensive curation of gene expression data from the literature and from directly submitted data, (ii) increased support and annotation of the genome sequence, (iii) expanded use of ontologies to support curation and query forms, (iv) curation of morpholino data from the literature, and (v) increased versatility of gene pages, with new data types, links and analysis tools.

Original languageEnglish (US)
JournalNucleic Acids Research
Volume34
Issue numberDatabase issue
StatePublished - Jan 1 2006
Externally publishedYes

Fingerprint

Information Services
Zebrafish
Databases
Morpholinos
Genetic Markers
Genes
Publications
Genome
Gene Expression
Data Curation

ASJC Scopus subject areas

  • Genetics

Cite this

Sprague, J., Bayraktaroglu, L., Clements, D., Conlin, T., Fashena, D., Frazer, K., ... Westerfield, M. (2006). The Zebrafish Information Network: the zebrafish model organism database. Nucleic Acids Research, 34(Database issue).

The Zebrafish Information Network : the zebrafish model organism database. / Sprague, Judy; Bayraktaroglu, Leyla; Clements, Dave; Conlin, Tom; Fashena, David; Frazer, Ken; Haendel, Melissa; Howe, Douglas G.; Mani, Prita; Ramachandran, Sridhar; Schaper, Kevin; Segerdell, Erik; Song, Peiran; Sprunger, Brock; Taylor, Sierra; Van Slyke, Ceri E.; Westerfield, Monte.

In: Nucleic Acids Research, Vol. 34, No. Database issue, 01.01.2006.

Research output: Contribution to journalArticle

Sprague, J, Bayraktaroglu, L, Clements, D, Conlin, T, Fashena, D, Frazer, K, Haendel, M, Howe, DG, Mani, P, Ramachandran, S, Schaper, K, Segerdell, E, Song, P, Sprunger, B, Taylor, S, Van Slyke, CE & Westerfield, M 2006, 'The Zebrafish Information Network: the zebrafish model organism database.', Nucleic Acids Research, vol. 34, no. Database issue.
Sprague J, Bayraktaroglu L, Clements D, Conlin T, Fashena D, Frazer K et al. The Zebrafish Information Network: the zebrafish model organism database. Nucleic Acids Research. 2006 Jan 1;34(Database issue).
Sprague, Judy ; Bayraktaroglu, Leyla ; Clements, Dave ; Conlin, Tom ; Fashena, David ; Frazer, Ken ; Haendel, Melissa ; Howe, Douglas G. ; Mani, Prita ; Ramachandran, Sridhar ; Schaper, Kevin ; Segerdell, Erik ; Song, Peiran ; Sprunger, Brock ; Taylor, Sierra ; Van Slyke, Ceri E. ; Westerfield, Monte. / The Zebrafish Information Network : the zebrafish model organism database. In: Nucleic Acids Research. 2006 ; Vol. 34, No. Database issue.
@article{ac84441ca4e440a58b18fa1aa8d18435,
title = "The Zebrafish Information Network: the zebrafish model organism database.",
abstract = "The Zebrafish Information Network (ZFIN; http://zfin.org) is a web based community resource that implements the curation of zebrafish genetic, genomic and developmental data. ZFIN provides an integrated representation of mutants, genes, genetic markers, mapping panels, publications and community resources such as meeting announcements and contact information. Recent enhancements to ZFIN include (i) comprehensive curation of gene expression data from the literature and from directly submitted data, (ii) increased support and annotation of the genome sequence, (iii) expanded use of ontologies to support curation and query forms, (iv) curation of morpholino data from the literature, and (v) increased versatility of gene pages, with new data types, links and analysis tools.",
author = "Judy Sprague and Leyla Bayraktaroglu and Dave Clements and Tom Conlin and David Fashena and Ken Frazer and Melissa Haendel and Howe, {Douglas G.} and Prita Mani and Sridhar Ramachandran and Kevin Schaper and Erik Segerdell and Peiran Song and Brock Sprunger and Sierra Taylor and {Van Slyke}, {Ceri E.} and Monte Westerfield",
year = "2006",
month = "1",
day = "1",
language = "English (US)",
volume = "34",
journal = "Nucleic Acids Research",
issn = "0305-1048",
publisher = "Oxford University Press",
number = "Database issue",

}

TY - JOUR

T1 - The Zebrafish Information Network

T2 - the zebrafish model organism database.

AU - Sprague, Judy

AU - Bayraktaroglu, Leyla

AU - Clements, Dave

AU - Conlin, Tom

AU - Fashena, David

AU - Frazer, Ken

AU - Haendel, Melissa

AU - Howe, Douglas G.

AU - Mani, Prita

AU - Ramachandran, Sridhar

AU - Schaper, Kevin

AU - Segerdell, Erik

AU - Song, Peiran

AU - Sprunger, Brock

AU - Taylor, Sierra

AU - Van Slyke, Ceri E.

AU - Westerfield, Monte

PY - 2006/1/1

Y1 - 2006/1/1

N2 - The Zebrafish Information Network (ZFIN; http://zfin.org) is a web based community resource that implements the curation of zebrafish genetic, genomic and developmental data. ZFIN provides an integrated representation of mutants, genes, genetic markers, mapping panels, publications and community resources such as meeting announcements and contact information. Recent enhancements to ZFIN include (i) comprehensive curation of gene expression data from the literature and from directly submitted data, (ii) increased support and annotation of the genome sequence, (iii) expanded use of ontologies to support curation and query forms, (iv) curation of morpholino data from the literature, and (v) increased versatility of gene pages, with new data types, links and analysis tools.

AB - The Zebrafish Information Network (ZFIN; http://zfin.org) is a web based community resource that implements the curation of zebrafish genetic, genomic and developmental data. ZFIN provides an integrated representation of mutants, genes, genetic markers, mapping panels, publications and community resources such as meeting announcements and contact information. Recent enhancements to ZFIN include (i) comprehensive curation of gene expression data from the literature and from directly submitted data, (ii) increased support and annotation of the genome sequence, (iii) expanded use of ontologies to support curation and query forms, (iv) curation of morpholino data from the literature, and (v) increased versatility of gene pages, with new data types, links and analysis tools.

UR - http://www.scopus.com/inward/record.url?scp=33644876661&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=33644876661&partnerID=8YFLogxK

M3 - Article

VL - 34

JO - Nucleic Acids Research

JF - Nucleic Acids Research

SN - 0305-1048

IS - Database issue

ER -