The role of tryptophan residues in Escherichia coli arginyl-tRNA synthetase

Qing-Shuo Zhang, En Duo Wang, Ying Lai Wang

Research output: Contribution to journalArticle

9 Citations (Scopus)

Abstract

The effect of N-bromosuccinimide (NBS) on the activity of Escherichia coli arginyl-tRNA synthetase (ArgRS) was studied. The results showed that only one tryptophan residue was easy of access to the reagent and was closely related to enzyme activity. When all the five tryptophan residues in ArgRS were changed via site-directed mutagenesis singly into Ala, the aminoacylation activity of the Trp162 mutated enzyme decreased seriously, while the other four mutant enzymes retained almost the same activity as the native one. The oxidation of the five mutant enzymes with NBS demonstrated that only the mutation of Trp162 resulted in the loss of sensitivity to the reagent. These results strongly suggest that Trp162 is more accessible to NBS and is related to enzyme activity. Furthermore, the far-UV CD spectroscopy of the mutant enzyme ArgRS162WA showed little change in its secondary structure. Finally, studies on the kinetics of the mutant enzyme ArgRS162WA in aminoacylation reaction showed that the reduction in activity could be attributed to the decrease in the values of k(cat) and k(cat)/K(m) for arginine. The thermodynamic calculation indicates that this mutation causes a decrease of the binding energy by 2.7 kJ/mol. Our data suggest that Trp162 is involved in the binding of arginine and in the transition state stabilization. Copyright (C) 1998 Elsevier Science B.V.

Original languageEnglish (US)
Pages (from-to)136-142
Number of pages7
JournalBiochimica et Biophysica Acta - Protein Structure and Molecular Enzymology
Volume1387
Issue number1-2
DOIs
StatePublished - Sep 8 1998
Externally publishedYes

Fingerprint

Arginine-tRNA Ligase
Tryptophan
Escherichia coli
Bromosuccinimide
Enzymes
Enzyme activity
Aminoacylation
Arginine
Mutagenesis
Binding energy
Mutation
Stabilization
Site-Directed Mutagenesis
Spectroscopy
Thermodynamics
Oxidation
Kinetics
Spectrum Analysis

Keywords

  • Arginyl-tRNA synthetase
  • Site-directed mutagenesis
  • Tryptophan

ASJC Scopus subject areas

  • Biochemistry
  • Molecular Biology
  • Structural Biology
  • Biophysics

Cite this

The role of tryptophan residues in Escherichia coli arginyl-tRNA synthetase. / Zhang, Qing-Shuo; Wang, En Duo; Wang, Ying Lai.

In: Biochimica et Biophysica Acta - Protein Structure and Molecular Enzymology, Vol. 1387, No. 1-2, 08.09.1998, p. 136-142.

Research output: Contribution to journalArticle

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