Structure of the chum salmon insulin-like growth factor I gene

V. M. Kavsan, A. P. Koval, V. A. Grebenjuk, S. J. Chan, D. F. Steiner, Charles Roberts, D. LeRoith

Research output: Contribution to journalArticle

34 Citations (Scopus)

Abstract

Insulin-like growth factor I (IGF-I) plays a major role in development and metabolism. Currently, the cDNA-derived primary structure of IGF-I is known for some mammals and for chicken, frog, and salmon. Additionally, the organization of the human, rat, and chicken IGF-I genes has been established. The investigation of IGF-I gene structure in fish would extend the evolutionary picture for this hormone and facilitate our understanding of the features of the IGF-I gene that are common to all vertebrate species. The cloned chum salmon IGF-I gene appears to be much more compact than the mammalian and avian genes, being less than 20 kb in length. As in other species, however, the mature IGF-I peptide appears to consist of 70 amino acids and is encoded by exons 2 and 3. Intriguingly, exon 1-encoded 5'- untranslated region sequences are highly conserved, while the coding sequences at the 3' end of the same exon are less conserved. The amino terminus of the signal peptide is four amino acids shorter than in the mammalian and avian peptides. The end of the B domain, the C, A, and D domains, and the first part of the E peptide are encoded by exon 3, but the exon 3-encoded E peptide sequence is 27 amino acids longer than in other species. These extra 27 amino acids, encoded by both coho and chum salmon cDNAs, may be deleted by alternative splicing, as suggested from the sequence of a coho salmon IGF-I cDNA. However, the substitution of AT for GT at the necessary splice donor site in the chum salmon IGF-I gene does not allow for the deletion of the sequence encoding these amino acids. The presence of additional chum salmon cDNAs that do not encode this 27-amino-acid sequence suggests the presence of a second chum salmon IGF-I gene with a functional splice junction at this location. Indeed, preliminary mapping data and partial sequencing suggests the existence of a second IGF-I gene in chum salmon. These observations show that the IGF-I genes in four classes of vertebrates have similar overall structures with regard to their common coding regions, but differ significantly in their 5' and 3' regions.

Original languageEnglish (US)
Pages (from-to)729-737
Number of pages9
JournalDNA and Cell Biology
Volume12
Issue number8
StatePublished - 1993
Externally publishedYes

Fingerprint

Oncorhynchus keta
Insulin-Like Growth Factor I
Genes
Exons
Complementary DNA
Oncorhynchus kisutch
Amino Acids
Vertebrates
Amino Acid Sequence
Chickens
Peptides
RNA Splice Sites
Conserved Sequence
Salmon
5' Untranslated Regions
Alternative Splicing
Protein Sorting Signals
Anura

ASJC Scopus subject areas

  • Cell Biology
  • Genetics
  • Molecular Biology

Cite this

Kavsan, V. M., Koval, A. P., Grebenjuk, V. A., Chan, S. J., Steiner, D. F., Roberts, C., & LeRoith, D. (1993). Structure of the chum salmon insulin-like growth factor I gene. DNA and Cell Biology, 12(8), 729-737.

Structure of the chum salmon insulin-like growth factor I gene. / Kavsan, V. M.; Koval, A. P.; Grebenjuk, V. A.; Chan, S. J.; Steiner, D. F.; Roberts, Charles; LeRoith, D.

In: DNA and Cell Biology, Vol. 12, No. 8, 1993, p. 729-737.

Research output: Contribution to journalArticle

Kavsan, VM, Koval, AP, Grebenjuk, VA, Chan, SJ, Steiner, DF, Roberts, C & LeRoith, D 1993, 'Structure of the chum salmon insulin-like growth factor I gene', DNA and Cell Biology, vol. 12, no. 8, pp. 729-737.
Kavsan VM, Koval AP, Grebenjuk VA, Chan SJ, Steiner DF, Roberts C et al. Structure of the chum salmon insulin-like growth factor I gene. DNA and Cell Biology. 1993;12(8):729-737.
Kavsan, V. M. ; Koval, A. P. ; Grebenjuk, V. A. ; Chan, S. J. ; Steiner, D. F. ; Roberts, Charles ; LeRoith, D. / Structure of the chum salmon insulin-like growth factor I gene. In: DNA and Cell Biology. 1993 ; Vol. 12, No. 8. pp. 729-737.
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