OBO-Edit - An ontology editor for biologists

John Day-Richter, Midori A. Harris, Melissa Haendel, Jennifer I. Clark, Amelia Ireland, Jane Lomax, Karen Eilbeck, Suzanna Lewis, Chris Mungall, Alexander D. Diehl, Harold Drabkin, Karen R. Christie, Tanya Berardini, Petra Fey, Carol A. Bastiani, Ranjana Kishore, Victoria Petri, Shuly Avraham, Pankaj Jaiswal, Melissa HaendelJohn Osborne

Research output: Contribution to journalArticle

175 Citations (Scopus)

Abstract

Summary: OBO-Edit is an open source, platform-independent ontology editor developed and maintained by the Gene Ontology Consortium. Implemented in Java, OBO-Edit uses a graph-oriented approach to display and edit ontologies. OBO-Edit is particularly valuable for viewing and editing biomedical ontologies.

Original languageEnglish (US)
Pages (from-to)2198-2200
Number of pages3
JournalBioinformatics
Volume23
Issue number16
DOIs
StatePublished - Aug 15 2007
Externally publishedYes

Fingerprint

Biological Ontologies
Gene Ontology
Ontology
Oriented Graph
Open Source
Java
Genes

ASJC Scopus subject areas

  • Clinical Biochemistry
  • Computer Science Applications
  • Computational Theory and Mathematics

Cite this

Day-Richter, J., Harris, M. A., Haendel, M., Clark, J. I., Ireland, A., Lomax, J., ... Osborne, J. (2007). OBO-Edit - An ontology editor for biologists. Bioinformatics, 23(16), 2198-2200. https://doi.org/10.1093/bioinformatics/btm112

OBO-Edit - An ontology editor for biologists. / Day-Richter, John; Harris, Midori A.; Haendel, Melissa; Clark, Jennifer I.; Ireland, Amelia; Lomax, Jane; Eilbeck, Karen; Lewis, Suzanna; Mungall, Chris; Diehl, Alexander D.; Drabkin, Harold; Christie, Karen R.; Berardini, Tanya; Fey, Petra; Bastiani, Carol A.; Kishore, Ranjana; Petri, Victoria; Avraham, Shuly; Jaiswal, Pankaj; Haendel, Melissa; Osborne, John.

In: Bioinformatics, Vol. 23, No. 16, 15.08.2007, p. 2198-2200.

Research output: Contribution to journalArticle

Day-Richter, J, Harris, MA, Haendel, M, Clark, JI, Ireland, A, Lomax, J, Eilbeck, K, Lewis, S, Mungall, C, Diehl, AD, Drabkin, H, Christie, KR, Berardini, T, Fey, P, Bastiani, CA, Kishore, R, Petri, V, Avraham, S, Jaiswal, P, Haendel, M & Osborne, J 2007, 'OBO-Edit - An ontology editor for biologists', Bioinformatics, vol. 23, no. 16, pp. 2198-2200. https://doi.org/10.1093/bioinformatics/btm112
Day-Richter J, Harris MA, Haendel M, Clark JI, Ireland A, Lomax J et al. OBO-Edit - An ontology editor for biologists. Bioinformatics. 2007 Aug 15;23(16):2198-2200. https://doi.org/10.1093/bioinformatics/btm112
Day-Richter, John ; Harris, Midori A. ; Haendel, Melissa ; Clark, Jennifer I. ; Ireland, Amelia ; Lomax, Jane ; Eilbeck, Karen ; Lewis, Suzanna ; Mungall, Chris ; Diehl, Alexander D. ; Drabkin, Harold ; Christie, Karen R. ; Berardini, Tanya ; Fey, Petra ; Bastiani, Carol A. ; Kishore, Ranjana ; Petri, Victoria ; Avraham, Shuly ; Jaiswal, Pankaj ; Haendel, Melissa ; Osborne, John. / OBO-Edit - An ontology editor for biologists. In: Bioinformatics. 2007 ; Vol. 23, No. 16. pp. 2198-2200.
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