Newt: A comprehensive web-based tool for viewing, constructing and analyzing biological maps

Hasan Balci, Metin Can Siper, Nasim Saleh, Ilkin Safarli, Ludovic Roy, Merve Kilicarslan, Rumeysa Ozaydin, Alexander Mazein, Charles Auffray, Ozgun Babur, Emek Demir, Ugur Dogrusoz

Research output: Contribution to journalArticlepeer-review

1 Scopus citations

Abstract

Motivation: Visualization of cellular processes and pathways is a key recurring requirement for effective biological data analysis. There is a considerable need for sophisticated web-based pathway viewers and editors operating with widely accepted standard formats, using the latest visualization techniques and libraries. Results: We developed a web-based tool named Newt for viewing, constructing and analyzing biological maps in standard formats such as SBGN, SBML and SIF.

Original languageEnglish (US)
Pages (from-to)1475-1477
Number of pages3
JournalBioinformatics
Volume37
Issue number10
DOIs
StatePublished - May 15 2021

ASJC Scopus subject areas

  • Statistics and Probability
  • Biochemistry
  • Molecular Biology
  • Computer Science Applications
  • Computational Theory and Mathematics
  • Computational Mathematics

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