GPU accelerated OCT processing at megahertz axial scan rate and high resolution video rate volumetric rendering

Yifan Jian, Kevin Wong, Marinko V. Sarunic

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Citations (Scopus)

Abstract

In this report, we describe how to highly optimize a CUDA based platform to perform real time optical coherence tomography data processing and 3D volumetric rendering using commercially-available cost-effective graphic processing units (GPUs). The maximum complete attainable axial scan processing rate (including memory transfer and rendering frame) was 2.2 megahertz for 16 bits pixel depth and 2048 pixels/A-scan, the maximum 3D volumetric rendering speed is 23 volumes/second (size:1024x256x200). To the best of our knowledge, this is the fastest processing rate reported to date with single-chip GPU and the first implementation of real time video rate volumetric OCT processing and rendering that is capable of matching the ultrahigh-speed OCT acquisition rates.

Original languageEnglish (US)
Title of host publicationOptical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XVII
DOIs
StatePublished - May 22 2013
Externally publishedYes
EventOptical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XVII - San Francisco, CA, United States
Duration: Feb 4 2013Feb 6 2013

Publication series

NameProgress in Biomedical Optics and Imaging - Proceedings of SPIE
Volume8571
ISSN (Print)1605-7422

Other

OtherOptical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XVII
CountryUnited States
CitySan Francisco, CA
Period2/4/132/6/13

Fingerprint

high resolution
Optical Coherence Tomography
Processing
Pixels
Optical tomography
Costs and Cost Analysis
pixels
Data storage equipment
acquisition
platforms
tomography
chips
Graphics processing unit
Costs
costs
Transfer (Psychology)
Rendering (computer graphics)

Keywords

  • CUDA
  • FD OCT
  • Fourier Domain Optical Coherence Tomography
  • GPU
  • Graphics Processing Unit

ASJC Scopus subject areas

  • Atomic and Molecular Physics, and Optics
  • Electronic, Optical and Magnetic Materials
  • Biomaterials
  • Radiology Nuclear Medicine and imaging

Cite this

Jian, Y., Wong, K., & Sarunic, M. V. (2013). GPU accelerated OCT processing at megahertz axial scan rate and high resolution video rate volumetric rendering. In Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XVII [85710Z] (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; Vol. 8571). https://doi.org/10.1117/12.2006670

GPU accelerated OCT processing at megahertz axial scan rate and high resolution video rate volumetric rendering. / Jian, Yifan; Wong, Kevin; Sarunic, Marinko V.

Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XVII. 2013. 85710Z (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; Vol. 8571).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Jian, Y, Wong, K & Sarunic, MV 2013, GPU accelerated OCT processing at megahertz axial scan rate and high resolution video rate volumetric rendering. in Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XVII., 85710Z, Progress in Biomedical Optics and Imaging - Proceedings of SPIE, vol. 8571, Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XVII, San Francisco, CA, United States, 2/4/13. https://doi.org/10.1117/12.2006670
Jian Y, Wong K, Sarunic MV. GPU accelerated OCT processing at megahertz axial scan rate and high resolution video rate volumetric rendering. In Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XVII. 2013. 85710Z. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE). https://doi.org/10.1117/12.2006670
Jian, Yifan ; Wong, Kevin ; Sarunic, Marinko V. / GPU accelerated OCT processing at megahertz axial scan rate and high resolution video rate volumetric rendering. Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XVII. 2013. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE).
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