Estimating Intermittent Individual Spawning Behavior via Disaggregating Group Data

Joel Nishimura, Rebecca Smith, Kathleen Jensen, Gerald Ankley, Karen Watanabe

Research output: Contribution to journalArticle

1 Scopus citations

Abstract

In order to understand fish biology and reproduction, it is important to know the fecundity patterns of individual fish, as frequently established by recording the output of mixed-sex groups of fish in a laboratory setting. However, for understanding individual reproductive health and modeling purposes it is important to estimate individual fecundity from group fecundity. We created a multistage method that disaggregates group-level data into estimates for individual-level clutch size and spawning interval distributions. The first stage of the method develops estimates of the daily spawning probability of fish. Daily spawning probabilities are then used to calculate the log likelihood of candidate distributions of clutch size. Selecting the best candidate distribution for clutch size allows for a Monte Carlo resampling of annotations of the original data which state how many fish spawned on which day. We verify this disaggregation technique by combining data from fathead minnow pairs, and checking that the disaggregation method reproduced the original clutch sizes and spawning intervals. This method will allow scientists to estimate individual clutch size and spawning interval distributions from group spawning data without specialized or elaborate experimental designs.

Original languageEnglish (US)
Pages (from-to)687-700
Number of pages14
JournalBulletin of Mathematical Biology
Volume80
Issue number3
DOIs
StatePublished - Mar 1 2018

Keywords

  • Deconvolution
  • Disaggregation
  • Inverse problems
  • Maximum likelihood

ASJC Scopus subject areas

  • Neuroscience(all)
  • Immunology
  • Mathematics(all)
  • Biochemistry, Genetics and Molecular Biology(all)
  • Environmental Science(all)
  • Pharmacology
  • Agricultural and Biological Sciences(all)
  • Computational Theory and Mathematics

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