TY - GEN
T1 - Automatic brain image segmentation for evaluation of experimental ischemic stroke using gradient vector flow and kernel annealing
AU - Ozertem, Umut
AU - Gruber, Andras
AU - Erdogmus, Deniz
PY - 2007
Y1 - 2007
N2 - Ischemic stroke is the most prevalent catastrophic disease of the brain. Various animal models have been used to study the disease. The majority of the models are based on induction of focal ischemic cerebral necrosis, followed by exhaustive morphometric analysis of the tissues. Despite recent advances in machine learning and image processing, neurological damage evaluations are still based on tedious manual or semi-automatic segmentation of brain images. We demonstrate a method that uses active contours combined with a kernel annealing approach to automatically segment the brain organs of interest, as well as a simple feature that highlights the contrast between normal and infarct brain tissue for automated analysis. The automated segmentation and analysis solution will be useful for increasing the productivity of experimentation and removing investigator bias from the data analysis.
AB - Ischemic stroke is the most prevalent catastrophic disease of the brain. Various animal models have been used to study the disease. The majority of the models are based on induction of focal ischemic cerebral necrosis, followed by exhaustive morphometric analysis of the tissues. Despite recent advances in machine learning and image processing, neurological damage evaluations are still based on tedious manual or semi-automatic segmentation of brain images. We demonstrate a method that uses active contours combined with a kernel annealing approach to automatically segment the brain organs of interest, as well as a simple feature that highlights the contrast between normal and infarct brain tissue for automated analysis. The automated segmentation and analysis solution will be useful for increasing the productivity of experimentation and removing investigator bias from the data analysis.
UR - http://www.scopus.com/inward/record.url?scp=51749090639&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=51749090639&partnerID=8YFLogxK
U2 - 10.1109/IJCNN.2007.4371162
DO - 10.1109/IJCNN.2007.4371162
M3 - Conference contribution
AN - SCOPUS:51749090639
SN - 142441380X
SN - 9781424413805
T3 - IEEE International Conference on Neural Networks - Conference Proceedings
SP - 1397
EP - 1400
BT - The 2007 International Joint Conference on Neural Networks, IJCNN 2007 Conference Proceedings
T2 - 2007 International Joint Conference on Neural Networks, IJCNN 2007
Y2 - 12 August 2007 through 17 August 2007
ER -