Association and impact of XPG Asp 1104 His gene polymorphism in HIV 1 disease progression to AIDS among north Indian HIV seropositive individuals

Ranbir Chander Sobti, Nega Berhane, Salih Abedule Mehedi, Rupinder Kler, Seyed Ali Hosseini, Vijish Kuttiat, Ajay Wanchu

Research output: Contribution to journalArticle

4 Citations (Scopus)

Abstract

Various efforts made to stop the deadly epidemic of HIV since its discovery in 1983 remain unsuccessful and this virus still continues to claim the lives of millions of individuals every year. The viral effect in the cell is complicated and the overall disease outcome is the result of interaction between a few viral proteins and complex host immune response. Because it has been reported that XPG (Xeroderma pigementesum group G) gene does play a role in reducing UV induced apoptosis and participate in Nucleotide Excision Repair (NER) process of DNA damage, it was hypothesized that polymorphism in this gene may have a role in HIV 1 disease progression to AIDS. The aim of the present study, therefore, was to find out the association between XPG gene polymorphism and its effect on the rate of HIV 1 disease progression to AIDS. 300 HIV seropositive cases and an equal number of age and sex matched controls were recruited for the study from north Indian population. The PCR-RFLP method was utilized to genotype 600 study subject for the XPG Asp 1104 His gene polymorphism. There was significant difference in the frequency of the His/His variant genotype (OR 1.95, 95% CI = 1.93-3.63, P = 0.04) between cases and controls indicating a probable role of this gene in host viral interactions.

Original languageEnglish (US)
Pages (from-to)317-324
Number of pages8
JournalMolecular Biology Reports
Volume37
Issue number1
DOIs
StatePublished - Jan 2010
Externally publishedYes

Fingerprint

Ichthyosis
Disease Progression
HIV-1
Acquired Immunodeficiency Syndrome
HIV
Genes
Genotype
Viral Proteins
Antigen-Antibody Complex
DNA Repair
Restriction Fragment Length Polymorphisms
DNA Damage
Apoptosis
Viruses
Polymerase Chain Reaction
Population

Keywords

  • Disease progression
  • HIV1/AIDS
  • NER
  • PCR-RFLP
  • XPG polymorphism

ASJC Scopus subject areas

  • Genetics
  • Molecular Biology

Cite this

Association and impact of XPG Asp 1104 His gene polymorphism in HIV 1 disease progression to AIDS among north Indian HIV seropositive individuals. / Sobti, Ranbir Chander; Berhane, Nega; Mehedi, Salih Abedule; Kler, Rupinder; Hosseini, Seyed Ali; Kuttiat, Vijish; Wanchu, Ajay.

In: Molecular Biology Reports, Vol. 37, No. 1, 01.2010, p. 317-324.

Research output: Contribution to journalArticle

Sobti, Ranbir Chander ; Berhane, Nega ; Mehedi, Salih Abedule ; Kler, Rupinder ; Hosseini, Seyed Ali ; Kuttiat, Vijish ; Wanchu, Ajay. / Association and impact of XPG Asp 1104 His gene polymorphism in HIV 1 disease progression to AIDS among north Indian HIV seropositive individuals. In: Molecular Biology Reports. 2010 ; Vol. 37, No. 1. pp. 317-324.
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