Find Publications

2019

Chronic heavy drinking drives distinct transcriptional and epigenetic changes in splenic macrophages

Sureshchandra, S., Stull, C., Ligh, B. J. K., Nguyen, S. B., Grant, K. K. & Messaoudi, I., Jan 1 2019, In : EBioMedicine.

Research output: Contribution to journalArticle

Open Access
Macrophages
Epigenomics
Alcohol Drinking
Drinking
Alcohols
1 Citation (Scopus)

Chronic systemic capillary leak syndrome treatment with intravenous immune globulin: Case report and review of the literature

Mullane, R., Langewisch, E., Florescu, M. & Plumb, T., Jan 1 2019, In : Clinical Nephrology. 91, 1, p. 59-63 5 p.

Research output: Contribution to journalArticle

Capillary Leak Syndrome
Intravenous Immunoglobulins
Shock
Edema
Therapeutics

Circadian Rhythm of Vascular Function in Midlife Adults

Thosar, S. S., Berman, A. M., Herzig, M. X., McHill, A. W., Bowles, N. P., Swanson, C. M., Clemons, N. A., Butler, M., Clemons, A. A., Emens, J. & Shea, S., Jun 1 2019, In : Arteriosclerosis, thrombosis, and vascular biology. 39, 6, p. 1203-1211 9 p.

Research output: Contribution to journalArticle

Open Access
Circadian Rhythm
Blood Vessels
Sleep
Endothelin-1
Malondialdehyde
1 Citation (Scopus)

Circulating tumor DNA dynamics using patient-customized assays are associated with outcome in neoadjuvantly treated breast cancer

Butler, T. M., Boniface, C. T., Johnson-Camacho, K., Tabatabaei, S., Melendez, D., Kelley, T., Gray, J., Corless, C. & Spellman, P., Apr 1 2019, In : Cold Spring Harbor molecular case studies. 5, 2

Research output: Contribution to journalArticle

Open Access
Chemotherapy
Tumors
Assays
Breast Neoplasms
Drug Therapy

Clarification and confocal imaging of the nonhuman primate placental micro-anatomy

Sargent, J. A., Roberts, V., Gaffney, J. E. & Frias, A., Feb 1 2019, In : BioTechniques. 66, 2, p. 79-84 6 p.

Research output: Contribution to journalArticle

Open Access
Primates
Anatomy
Tissue
Imaging techniques
Placenta

Classification and comparison via neural networks

Yıldız, İ., Tian, P., Dy, J., Erdoğmuş, D., Brown, J., Kalpathy-Cramer, J., Ostmo, S., Campbell, J., Chiang, M. & Ioannidis, S., Oct 1 2019, In : Neural Networks. 118, p. 65-80 16 p.

Research output: Contribution to journalArticle

Area Under Curve
Labels
Neural networks
Learning
Network architecture
1 Citation (Scopus)

Clean air for Brain Heath; ongoing agenda of 2018 World Brain Day

Reis, J., Spencer, P., Wasay, M., Grisold, W. & Carroll, W. M., Feb 15 2019, In : Journal of the Neurological Sciences. 397, p. 61-62 2 p.

Research output: Contribution to journalLetter

Air
Brain
1 Citation (Scopus)

Cleavage factor 25 deregulation contributes to pulmonary fibrosis through alternative polyadenylation

Weng, T., Ko, J., Masamha, C. P., Xia, Z., Xiang, Y., Chen, N. Y., Molina, J. G., Collum, S., Mertens, T. C., Luo, F., Philip, K., Davies, J., Huang, J., Wilson, C., Thandavarayan, R. A., Bruckner, B. A., Jyothula, S. S. K., Volcik, K. A., Li, L., Han, L. & 5 others, Li, W., Assassi, S., Karmouty-Quintana, H., Wagner, E. J. & Blackburn, M. R., May 1 2019, In : Journal of Clinical Investigation. 129, 5, p. 1984-1999 16 p.

Research output: Contribution to journalArticle

Open Access
Idiopathic Pulmonary Fibrosis
Polyadenylation
Pulmonary Fibrosis
Fibroblasts
Down-Regulation

Clinical and methodological challenges for assessing freezing of gait: Future perspectives

Mancini, M., Bloem, B. R., Horak, F., Lewis, S. J. G., Nieuwboer, A. & Nonnekes, J., Jan 1 2019, In : Movement Disorders.

Research output: Contribution to journalReview article

Gait
Freezing
Parkinsonian Disorders
Technology
Education

Clinical Benefit of Hospitalization for Older Adults With Unexplained Syncope: A Propensity-Matched Analysis

Probst, M. A., Su, E., Weiss, R. E., Yagapen, A. N., Malveau, S. E., Adler, D. H., Bastani, A., Baugh, C. W., Caterino, J. M., Clark, C. L., Diercks, D. B., Hollander, J. E., Nicks, B. A., Nishijima, D. K., Shah, M. N., Stiffler, K. A., Storrow, A. B., Wilber, S. T. & Sun, B., Jan 1 2019, In : Annals of emergency medicine.

Research output: Contribution to journalArticle

Syncope
Hospitalization
Hospital Emergency Service
Propensity Score
Confidence Intervals
Pyoderma Gangrenosum
Intravenous Immunoglobulins
Ulcer
Therapeutics
PubMed
4 Citations (Scopus)

Clinical Features of Neutrophilic Dermatosis Variants Resembling Necrotizing Fasciitis

Sanchez, I. M., Lowenstein, S., Johnson, K. A., Babik, J., Haag, C., Keller, J. J., Ortega Loayza, A., Cohen, J., McCalmont, T. H., Demer, A. M., Mansh, M. D., Hylwa, S. A., Liu, J. & Shinkai, K., Jan 1 2019, In : JAMA Dermatology. 155, 1, p. 79-84 6 p.

Research output: Contribution to journalArticle

Necrotizing Fasciitis
Skin Diseases
Sweet Syndrome
Pyoderma Gangrenosum
Diagnostic Errors
5 Citations (Scopus)

Clinical-grade stem cell-derived retinal pigment epithelium patch rescues retinal degeneration in rodents and pigs

Sharma, R., Khristov, V., Rising, A., Jha, B. S., Dejene, R., Hotaling, N., Li, Y., Stoddard, J., Stankewicz, C., Wan, Q., Zhang, C., Campos, M. M., Miyagishima, K. J., McGaughey, D., Villasmil, R., Mattapallil, M., Stanzel, B., Qian, H., Wong, W., Chase, L. & 6 others, Charles, S., McGill, T., Miller, S., Maminishkis, A., Amaral, J. & Bharti, K., Jan 16 2019, In : Science Translational Medicine. 11, 475, eaat5580.

Research output: Contribution to journalArticle

Retinal Degeneration
Retinal Pigment Epithelium
Induced Pluripotent Stem Cells
Rodentia
Swine
1 Citation (Scopus)

Clinically Diagnosing Pertussis-associated Cough in Adults and Children: CHEST Guideline and Expert Panel Report

CHEST Expert Cough Panel, Jan 1 2019, In : Chest. 155, 1, p. 147-154 8 p.

Research output: Contribution to journalArticle

Whooping Cough
Cough
Guidelines
Vomiting
Fever

Clinical Management of Pharmacokinetic Drug Interactions with Direct Oral Anticoagulants (DOACs)

Herink, M. C., Zhuo, Y. F., Williams, C. D. & Deloughery, T., Jan 1 2019, (Accepted/In press) In : Drugs.

Research output: Contribution to journalReview article

Drug Interactions
Anticoagulants
Pharmacokinetics
Warfarin
Serum
Agenesis of Corpus Callosum
Prenatal Diagnosis
Cysts
Fetus
Language

CLINICAL PATHOLOGIC CORRELATION OF SARCOIDOSIS-ASSOCIATED MULTIFOCAL CHORIORETINITIS IN AN ELDERLY PATIENT

Saleh, M. G. A., OʼDonnell, J. L., Davis, R. P., Wilson, D. & Lin, P., Mar 1 2019, In : Retinal cases & brief reports. 13, 2, p. 154-157 4 p.

Research output: Contribution to journalArticle

Chorioretinitis
Sarcoidosis
Adrenal Cortex Hormones
Intraocular Lymphoma
Panuveitis

Clinical performance and chemical-physical properties of bulk fill composites resin —a systematic review and meta-analysis

Cidreira Boaro, L. C., Pereira Lopes, D., de Souza, A. S. C., Lie Nakano, E., Ayala Perez, M. D., Pfeifer, C. & Gonçalves, F., Jan 1 2019, (Accepted/In press) In : Dental Materials.

Research output: Contribution to journalReview article

Composite Resins
Polymerization
Meta-Analysis
Resins
Physical properties
1 Citation (Scopus)

Clinical pharmacology in diuretic use

Ellison, D., Aug 7 2019, In : Clinical Journal of the American Society of Nephrology. 14, 8, p. 1248-1257 10 p.

Research output: Contribution to journalArticle

Open Access
Cardio-Renal Syndrome
Kidney Tubules
Clinical Pharmacology
Diuresis
Nephrotic Syndrome

Clinical Phenotypes of Carriers of Mutations in CHD8 or Its Conserved Target Genes

Beighley, J. S., Hudac, C. M., Arnett, A. B., Peterson, J. L., Gerdts, J., Wallace, A. S., Mefford, H. C., Hoekzema, K., Turner, T. N., O'Roak, B., Eichler, E. E. & Bernier, R. A., Jan 1 2019, (Accepted/In press) In : Biological Psychiatry.

Research output: Contribution to journalArticle

DNA-Binding Proteins
Phenotype
Mutation
Genes
Exome
1 Citation (Scopus)

Clinical Practice Approach to Nonalcoholic Fatty Liver Disease by Pediatric Gastroenterologists in the United States

Shapiro, W. L., Yu, E. L., Arin, J. C., Murray, K. F., Ali, S., Desai, N. K., Xanthakos, S. A., Lin, H., Alkhouri, N., Abdou, R., Abrams, S. H., Butler, M. W., Faasse, S. A., Gillis, L. A., Hadley, T. A., Jain, A. K., Kavan, M., Kordy, K., Lee, P., Panganiban, J. & 10 others, Pohl, J. F., Potter, C., Rudolph, B., Sundaram, S. S., Joshi, S., Proudfoot, J. A., Goyal, N. P., Harlow, K. E., Newton, K. P. & Schwimmer, J. B., Feb 1 2019, In : Journal of pediatric gastroenterology and nutrition. 68, 2, p. 182-189 8 p.

Research output: Contribution to journalArticle

Pediatrics
Exercise
Comorbidity
Physicians
Child Care
1 Citation (Scopus)

Clinical Protocol to Promote Standardization of Basic Tinnitus Services by Audiologists

Henry, J. & Manning, C., Apr 22 2019, In : American journal of audiology. 28, 1, p. 152-161 10 p.

Research output: Contribution to journalArticle

Tinnitus
Clinical Protocols
Hearing Aids
Practice Guidelines
Research

Clinical Reasoning: A 47-year-old man with diffuse white matter disease and rapidly progressive dementia

Di Luca, D. G., Landman, J., Ortega, M. R., Gultekin, S. & Sun, X., Jun 11 2019, In : Neurology. 92, 24, p. e2832-e2837

Research output: Contribution to journalArticle

Open Access
Leukoencephalopathies
Dementia
Inpatients
Databases
Patient Acceptance of Health Care
Research
Organizations
6 Citations (Scopus)

Clinical resistance to crenolanib in acute myeloid leukemia due to diverse molecular mechanisms

Zhang, H., Savage, S., Schultz, A. R., Bottomly, D., White, L., Segerdell, E., Wilmot, B., McWeeney, S., Eide, C. A., Nechiporuk, T., Carlos, A., Henson, R., Lin, C., Searles, R., Ho, H., Lam, Y. L., Sweat, R., Follit, C., Jain, V., Lind, E. & 10 others, Borthakur, G., Garcia-Manero, G., Ravandi, F., Kantarjian, H. M., Cortes, J., Collins, R., Buelow, D. R., Baker, S. D., Druker, B. & Tyner, J., Dec 1 2019, In : Nature Communications. 10, 1, 244.

Research output: Contribution to journalArticle

leukemias
mutations
Acute Myeloid Leukemia
Mutation
inhibitors

Clinical utility of chromosome genomic array testing for unclassified and advanced-stage renal cell carcinomas

Andeen, N., Qu, X., Antic, T., Tykodi, S. S., Fang, M. & Tretiakova, M. S., Apr 1 2019, In : Archives of Pathology and Laboratory Medicine. 143, 4, p. 494-504 11 p.

Research output: Contribution to journalArticle

Open Access
Renal Cell Carcinoma
Chromosomes
Cytogenetics
Neoplasms
Oxyphilic Adenoma

Clinical Workflows and the Associated Tasks and Behaviors to Support Delivery of Integrated Behavioral Health and Primary Care

Davis, M., Gunn, R., Cifuentes, M., Khatri, P., Hall, J., Gilchrist, E., Peek, C. J., Klowden, M., Lazarus, J. A., Miller, B. F. & Cohen, D., Jan 1 2019, In : The Journal of ambulatory care management. 42, 1, p. 51-65 15 p.

Research output: Contribution to journalArticle

Integrated Delivery of Health Care
Workflow
Personnel Staffing and Scheduling
Electronic Health Records
Immersion
3 Citations (Scopus)

Clustering of Necropsy-Confirmed Porcine Cysticercosis Surrounding Taenia solium Tapeworm Carriers in Peru

Lescano, A. G., Pray, I. W., Gonzalez, A. E., Gilman, R. H., Tsang, V. C. W., Gamboa, R., Guezala, M. C., Aybar, V., Rodriguez, S., Moulton, L. H., Leontsini, E., Gonzalvez, G., O'Neal, S., Garcia, H. H. & For The Cysticercosis Working Group In Peru, T. C. W. G. I. P., Feb 1 2019, In : The American journal of tropical medicine and hygiene. 100, 2, p. 314-322 9 p.

Research output: Contribution to journalArticle

Taenia solium
Cysticercosis
Peru
Cestoda
Cluster Analysis

Clyde E. Keeler: The Rodless Mouse and the Early Days of Retinal Genetic Research

Albert, D., Sep 1 2019, In : Ophthalmology Retina. 3, 9, p. 716-723 8 p.

Research output: Contribution to journalArticle

Genetic Research
Retinitis Pigmentosa
Retinal Rod Photoreceptor Cells
Genetic Therapy
Names
2 Citations (Scopus)

Coagulopathy and bleeding associated with salicylate toxicity

Hatten, B. W. & Hendrickson, R., Jan 1 2019, In : Clinical Toxicology.

Research output: Contribution to journalArticle

Salicylates
Toxicity
Hemorrhage
Hospitalization
Kidney

Codon-Optimization of Wild-Type Adeno-Associated Virus Capsid Sequences Enhances DNA Family Shuffling while Conserving Functionality

Cabanes-Creus, M., Ginn, S. L., Amaya, A. K., Liao, S. H. Y., Westhaus, A., Hallwirth, C. V., Wilmott, P., Ward, J., Dilworth, K. L., Santilli, G., Rybicki, A., Nakai, H., Thrasher, A. J., Filip, A. C., Alexander, I. E. & Lisowski, L., Mar 15 2019, In : Molecular Therapy - Methods and Clinical Development. 12, p. 71-84 14 p.

Research output: Contribution to journalArticle

DNA Shuffling
Dependovirus
Capsid
Codon
Tropism

Coevolution of Genome Architecture and Social Behavior

Rubenstein, D. R., Ågren, J. A., Carbone, L., Elde, N. C., Hoekstra, H. E., Kapheim, K. M., Keller, L., Moreau, C. S., Toth, A. L., Yeaman, S. & Hofmann, H. A., Jan 1 2019, In : Trends in Ecology and Evolution.

Research output: Contribution to journalReview article

social behavior
coevolution
genome
mating behavior
molecular biology

Cognitive functioning in thyroid cancer survivors: a systematic review and meta-analysis

Saeed, O., Bernstein, L. J., Fazelzad, R., Samuels, M., Burmeister, L. A., Thabane, L., Ezzat, S., Goldstein, D. P., Jones, J. & Sawka, A. M., Apr 15 2019, In : Journal of Cancer Survivorship. 13, 2, p. 231-243 13 p.

Research output: Contribution to journalReview article

Thyroid Neoplasms
Meta-Analysis
Confidence Intervals
Cognition
Trail Making Test
2 Citations (Scopus)

Collagen remodeling in the hypoxic tumor- mesothelial niche promotes ovarian cancer metastasis

Natarajan, S., Foreman, K. M., Soriano, M. I., Rossen, N. S., Shehade, H., Fregoso, D. R., Eggold, J. T., Krishnan, V., Dorigo, O., Krieg, A., Heilshorn, S. C., Sinha, S., Fuh, K. C. & Rankin, E. B., Jan 1 2019, In : Cancer Research. 79, 9, p. 2271-2284 14 p.

Research output: Contribution to journalArticle

Ovarian Neoplasms
Collagen
Protein-Lysine 6-Oxidase
Neoplasm Metastasis
Neoplasms

Colloids, nanoparticles, and materials for imaging, delivery, ablation, and theranostics by focused ultrasound (FUS)

Yildirim, A., Blum, N. T. & Goodwin, A. P., Jan 1 2019, In : Theranostics. 9, 9, p. 2572-2594 23 p.

Research output: Contribution to journalArticle

Open Access
Colloids
Acoustics
Nanoparticles
Contrast Media
Microbubbles

Colorectal cancer screening in newly insured Medicaid members: A review of concurrent federal and state policies

O'Leary, M. C., Lich, K. H., Gu, Y., Wheeler, S. B., Coronado, G. D., Bartelmann, S. E., Lind, B., Mayorga, M. E. & Davis, M., May 9 2019, In : BMC health services research. 19, 1, 298.

Research output: Contribution to journalArticle

Open Access
Concurrent Review
Medicaid
Early Detection of Cancer
Colorectal Neoplasms
Accountable Care Organizations
1 Citation (Scopus)

Combined effects of three high-energy charged particle beams important for space flight on brain, behavioral and cognitive endpoints in B6D2F1 female and Male mice

Raber, J., Yamazaki, J., Torres, E. R. S., Kirchoff, N., Stagaman, K., Sharpton, T., Turker, M. & Kronenberg, A., Jan 1 2019, In : Frontiers in Physiology. 10, MAR, 179.

Research output: Contribution to journalArticle

Open Access
Space Flight
Brain-Derived Neurotrophic Factor
Brain
Ions
Protons

Combined iron oxide nanoparticle ferumoxytol and gadolinium contrast enhanced MRI define glioblastoma pseudoprogression

Barajas, R., Hamilton, B., Schwartz, D., Mcconnell, H. L., Pettersson, D., Horvath, A., Szidonya, L., Varallyay, C. G., Firkins, J., Jaboin, J., Kubicky, C. D., Raslan, A., Dogan, A., Cetas, J., Ciporen, J., Han, S. J., Ambady, P., Muldoon, L., Woltjer, R. R., Rooney, W. & 1 others, Neuwelt, E., Mar 18 2019, In : Neuro-Oncology. 21, 4, p. 517-526 10 p.

Research output: Contribution to journalArticle

Open Access
Ferrosoferric Oxide
Gadolinium
Glioblastoma
Nanoparticles
Isocitrate Dehydrogenase
1 Citation (Scopus)

Combined MEK and Bcl-2/X L inhibition is effective in high-grade serous ovarian cancer patient–derived xenograft models and BIM levels are predictive of responsiveness

Iavarone, C., Zervantonakis, I. K., Selfors, L. M., Palakurthi, S., Liu, J. F., Drapkin, R., Matulonis, U. A., Hallberg, D., Velculescu, V. E., Leverson, J. D., Sampath, D., Mills, G. & Brugge, J. S., Mar 1 2019, In : Molecular cancer therapeutics. 18, 3, p. 642-655 14 p.

Research output: Contribution to journalArticle

Mitogen-Activated Protein Kinase Kinases
Heterografts
Ovarian Neoplasms
MAP Kinase Signaling System
Drug Combinations

Combining options in metastatic prostate cancer

Kopp, R. & Beer, T. T., Jan 1 2019, In : Nature Reviews Urology.

Research output: Contribution to journalComment/debate

Prostatic Neoplasms
docetaxel
Therapeutics

Commercial cannabidiol oil contaminated with the synthetic cannabinoid AB-FUBINACA given to a pediatric patient

Rianprakaisang, T., Gerona, R. & Hendrickson, R., Jan 1 2019, In : Clinical Toxicology.

Research output: Contribution to journalLetter

Cannabidiol
Industrial Oils
Pediatrics
Cannabinoids
Oils

Communicating acute coronary syndrome risk to women in primary care: A scoping review of the literature

Knight, E., Slebodnik, M., Pinder, C. & DeVon, H. A., Jan 1 2019, In : Patient Education and Counseling.

Research output: Contribution to journalReview article

Acute Coronary Syndrome
Primary Health Care
Communication
PubMed
Coronary Disease

Community Levels of PrEP Use Among Men Who Have Sex with Men by Race/Ethnicity, San Francisco, 2017

Raymond, H. F., Snowden, J., Guigayoma, J., McFarland, W. & Chen, Y. H., Jan 1 2019, In : AIDS and Behavior.

Research output: Contribution to journalArticle

San Francisco
HIV
Risk-Taking
Hispanic Americans
African Americans

Comorbidities, anticoagulants, and geriatric-specific physiology for the field triage of injured older adults

Newgard, C., Lin, A., Eckstrom, E., Caughey, A., Malveau, S., Griffiths, D., Zive, D. & Bulger, E., May 1 2019, In : Journal of Trauma and Acute Care Surgery. 86, 5, p. 829-837 9 p.

Research output: Contribution to journalArticle

Triage
Geriatrics
Anticoagulants
Comorbidity
Confidence Intervals

Comparative assessment of methicillin resistant Staphylococcus aureus diagnostic assays for use in resource-limited settings

Ayebare, A., Bebell, L. M., Bazira, J., Ttendo, S., Katawera, V., Bangsberg, D., Siedner, M. J., Firth, P. G. & Boum, Y., Aug 22 2019, In : BMC Microbiology. 19, 1, 194.

Research output: Contribution to journalArticle

Open Access
Methicillin-Resistant Staphylococcus aureus
Nose
Costs and Cost Analysis
Polymerase Chain Reaction
Methicillin

Comparative effectiveness and harms of long-acting insulins for type 1 and type 2 diabetes: A systematic review and meta-analysis

Holmes, R. S., Crabtree, E. & McDonagh, M., Jan 1 2019, (Accepted/In press) In : Diabetes, Obesity and Metabolism.

Research output: Contribution to journalArticle

Long-Acting Insulin
Type 1 Diabetes Mellitus
Type 2 Diabetes Mellitus
Meta-Analysis
Hypoglycemia
2 Citations (Scopus)

Comparative effectiveness and maintenance of diabetes self-management education interventions for Marshallese patients with type 2 diabetes: A randomized controlled trial

McElfish, P. A., Long, C. R., Kohler, P., Yeary, K. H. K., Bursac, Z., Narcisse, M. R., Felix, H. C., Rowland, B., Hudson, J. S. & Goulden, P. A., May 1 2019, In : Diabetes care. 42, 5, p. 849-858 10 p.

Research output: Contribution to journalArticle

Self Care
Type 2 Diabetes Mellitus
Randomized Controlled Trials
Maintenance
Education
5 Citations (Scopus)

Comparative efficacy, safety, and cardiovascular outcomes with once-weekly subcutaneous semaglutide in the treatment of type 2 diabetes: Insights from the SUSTAIN 1–7 trials

Aroda, V. R., Ahmann, A., Cariou, B., Chow, F., Davies, M. J., Jódar, E., Mehta, R., Woo, V. & Lingvay, I., Jan 1 2019, In : Diabetes and Metabolism.

Research output: Contribution to journalReview article

Type 2 Diabetes Mellitus
Safety
Therapeutics
Incretins
Food

Comparative risks of chronic inhaled corticosteroids and macrolides for bronchiectasis

Henkle, E., Curtis, J. R., Chen, L., Chan, B., Aksamit, T. R., Daley, C. L., Griffith, D. E. & Winthrop, K., Jul 1 2019, In : The European respiratory journal. 54, 1

Research output: Contribution to journalArticle

Open Access
Bronchiectasis
Macrolides
Adrenal Cortex Hormones
Respiratory Tract Infections
Propensity Score
1 Citation (Scopus)

Comparing Canadian and United States opioid agonist therapy policies

Priest, K. C., Gorfinkel, L., Klimas, J., Jones, A. A., Fairbairn, N. & McCarty, D., Jan 1 2019, In : International Journal of Drug Policy.

Research output: Contribution to journalArticle

Opioid Analgesics
Therapeutics
British Columbia
Canada
Buprenorphine