Find Publications

2019
3 Citations (Scopus)

Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources

Köhler, S., Carmody, L., Vasilevsky, N., Jacobsen, J. O. B., Danis, D., Gourdine, J. P., Gargano, M., Harris, N. L., Matentzoglu, N., McMurry, J. A., Osumi-Sutherland, D., Cipriani, V., Balhoff, J. P., Conlin, T., Blau, H., Baynam, G., Palmer, R., Gratian, D., Dawkins, H., Segal, M. & 49 othersJansen, A. C., Muaz, A., Chang, W. H., Bergerson, J., Laulederkind, S. J. F., Yüksel, Z., Beltran, S., Freeman, A. F., Sergouniotis, P. I., Durkin, D., Storm, A. L., Hanauer, M., Brudno, M., Bello, S. M., Sincan, M., Rageth, K., Wheeler, M. T., Oegema, R., Lourghi, H., Della Rocca, M. G., Thompson, R., Castellanos, F., Priest, J., Cunningham-Rundles, C., Hegde, A., Lovering, R. C., Hajek, C., Olry, A., Notarangelo, L., Similuk, M., Zhang, X. A., Gómez-Andrés, D., Lochmüller, H., Dollfus, H., Rosenzweig, S., Marwaha, S., Rath, A., Sullivan, K., Smith, C., Milner, J. D., Leroux, D., Boerkoel, C. F., Klion, A., Carter, M. C., Groza, T., Smedley, D., Haendel, M., Mungall, C. & Robinson, P. N., Jan 8 2019, In : Nucleic Acids Research. 47, D1, p. D1018-D1027

Research output: Contribution to journalArticle

Knowledge Bases
Phenotype
Exome
Vocabulary
Electronic Health Records

Expert Commentary on Diagnosis and Management of Parastomal Hernias

Martindale, R., Feb 1 2019, In : Diseases of the Colon and Rectum. 62, 2, 1 p.

Research output: Contribution to journalArticle

Hernia

Exploratory study examining associations between prescription opioid dose and delay discounting in patients with chronic pain

Morasco, B., Dobscha, S., Hyde, S. & Mitchell, S. H., Jan 1 2019, In : Journal of opioid management. 15, 1, p. 19-25 7 p.

Research output: Contribution to journalArticle

Chronic Pain
Opioid Analgesics
Prescriptions
Musculoskeletal Pain
Impulsive Behavior

Extent of resection and role of adjuvant treatment in resected localized breast angiosarcoma

McClelland, S., Hatfield, J., Degnin, C., Chen, Y. & Mitin, T., Jan 1 2019, In : Breast Cancer Research and Treatment.

Research output: Contribution to journalArticle

Survival
Neoplasms
Mastectomy
Adjuvant Chemotherapy
Therapeutics

Extracorporeal potassium binding for the management of hyperkalemia in an anephric model of crush injury

Hoareau, G. L., Beyer, C. A., Wilson, C., Kashtan, H., Wishy, A., Grayson, J. K., Walker, L., Ross, J. & Stewart, I. J., Apr 1 2019, In : Journal of Trauma and Acute Care Surgery. 86, 4, p. 694-701 8 p.

Research output: Contribution to journalArticle

Hyperkalemia
Potassium
Swine
Serum
Artificial Kidneys

Extracutaneous involvement of pyoderma gangrenosum

Borda, L. J., Wong, L. L., Marzano, A. V. & Ortega Loayza, A., Jan 1 2019, In : Archives of Dermatological Research.

Research output: Contribution to journalReview article

Pyoderma Gangrenosum
Skin Diseases
Polyarteritis Nodosa
Granulomatosis with Polyangiitis
Antiphospholipid Syndrome

Extrasynaptic NMDA receptors on rod pathway amacrine cells: Molecular composition, activation, and signaling

Veruki, M. L., Zhou, Y., Castilho, Á., Morgans, C. & Hartveit, E., Jan 23 2019, In : Journal of Neuroscience. 39, 4, p. 627-650 24 p.

Research output: Contribution to journalArticle

Amacrine Cells
N-Methyl-D-Aspartate Receptors
A 17
Synaptic Potentials
Glutamic Acid
2 Citations (Scopus)

Factors associated with Healthcare Effectiveness Data and Information Set (HEDIS) alcohol and other drug measure performance in 2014–2015

Weisner, C., Campbell, C. I., Altschuler, A., Yarborough, B. J. H., Lapham, G. T., Binswanger, I. A., Hechter, R. C., Ahmedani, B. K., Haller, I. V., Sterling, S. A., McCarty, D., Satre, D. D. & Kline-Simon, A. H., Jan 1 2019, (Accepted/In press) In : Substance Abuse.

Research output: Contribution to journalArticle

Odds Ratio
Alcohols
Confidence Intervals
Delivery of Health Care
Pharmaceutical Preparations

Factors influencing amount of guidance in the operating room during laparoscopic cases

Hoops, H. E., Haley, C., Cook, M. R., Lopez, O., Dewey, E., Brasel, K., Spight, D. & Kiraly, L. N., May 1 2019, In : American journal of surgery. 217, 5, p. 979-985 7 p.

Research output: Contribution to journalArticle

Operating Rooms
Laparoscopy
Task Performance and Analysis
Communication
Efficiency

Factors influencing medical student self-competence to provide weight management services

Doshi, R. S., Gudzune, K. A., Dyrbye, L. N., Dovidio, J. F., Burke, S. E., White, R. O., Perry, S., Yeazel, M., van Ryn, M. & Phelan, S. M., Feb 1 2019, In : Clinical obesity. 9, 1, p. e12288

Research output: Contribution to journalArticle

Medical Students
Mental Competency
Obesity
Weights and Measures
Students

Factor VIII: Long-established role in haemophilia A and emerging evidence beyond haemostasis

Samuelson Bannow, B., Recht, M., Négrier, C., Hermans, C., Berntorp, E., Eichler, H., Mancuso, M. E., Klamroth, R., O'Hara, J., Santagostino, E., Matsushita, T. & Kessler, C., Jan 1 2019, In : Blood Reviews.

Research output: Contribution to journalReview article

Open Access
Factor VIII
Hemophilia A
Hemostasis
Proteins
Factor IXa

Family caregiver satisfaction with inpatient rehabilitation care

Hanson, K. T., Carlson, K., Friedemann-Sanchez, G., Meis, L. A., Van Houtven, C. H., Jensen, A. C., Phelan, S. M. & Griffin, J. M., Mar 1 2019, In : PloS one. 14, 3, e0213767.

Research output: Contribution to journalArticle

Open Access
rehabilitation (people)
health care workers
Patient rehabilitation
Caregivers
Inpatients

F-box protein-32 down-regulates small-conductance calcium-activated potassium channel 2 in diabetic mouse atria

Ling, T. Y., Yi, F., Lu, T., Wang, X. L., Sun, X., Willis, M. S., Wu, L. Q., Shen, W. K., Adelman, J. & Lee, H. C., Jan 1 2019, In : Journal of Biological Chemistry. 294, 11, p. 4160-4168 9 p.

Research output: Contribution to journalArticle

Open Access
Small-Conductance Calcium-Activated Potassium Channels
F-Box Proteins
Medical problems
Proteasome Endopeptidase Complex
Diabetes Mellitus

Feasibility of a mindful yoga program for women with metastatic breast cancer: results of a randomized pilot study

Porter, L. S., Carson, J., Olsen, M., Carson, K. M., Sanders, L., Jones, L., Westbrook, K. & Keefe, F. J., Jan 1 2019, In : Supportive Care in Cancer.

Research output: Contribution to journalArticle

Yoga
Breast Neoplasms
Self-Help Groups
Mindfulness
Self Report

Fetal arrhythmias: Diagnosis and management

Batra, A. S. & Balaji, S., Jan 1 2019, In : Indian Pacing and Electrophysiology Journal.

Research output: Contribution to journalReview article

Open Access
Cardiac Arrhythmias
Fetal Heart Rate
Heart Block
Heart Rate
Bradycardia

FGF2-FGFR1 signaling regulates release of Leukemia-Protective exosomes from bone marrow stromal cells

Javidi-Sharifi, N., Martinez, J., English, I., Joshi, S. K., Scopim-Ribiero, R., Edwards, D. K., Agarwal, A., Lopez, C., Jorgens, D., Tyner, J., Druker, B. & Traer, E., Feb 5 2019, In : eLife. 8

Research output: Contribution to journalArticle

Open Access
Exosomes
Fibroblast Growth Factor 2
Mesenchymal Stromal Cells
Protein-Tyrosine Kinases
Bone

Finding Your People in the Digital Age: Virtual Communities of Practice to Promote Education Scholarship

Yarris, L., Chan, T. M., Gottlieb, M. & Juve, A. M., Feb 1 2019, In : Journal of graduate medical education. 11, 1, p. 1-5 5 p.

Research output: Contribution to journalEditorial

Open Access
Education
Autistic Disorder

First-year weight loss with androgen-deprivation therapy increases risks of prostate cancer progression and prostate cancer-specific mortality: results from SEARCH

Griffin, K., Csizmadi, I., Howard, L. E., Pomann, G. M., Aronson, W. J., Kane, C. J., Amling, C., Cooperberg, M. R., Terris, M. K., Beebe-Dimmer, J. & Freedland, S. J., Mar 15 2019, In : Cancer Causes and Control. 30, 3, p. 259-269 11 p.

Research output: Contribution to journalArticle

Cancer Care Facilities
Androgens
Weight Loss
Prostatic Neoplasms
Confidence Intervals

FMAHealth: A Work in Progress

Saultz, J., Feb 1 2019, In : Family medicine. 51, 2, p. 81-83 3 p.

Research output: Contribution to journalArticle

Foramen ovale blood flow and cardiac function after main pulmonary artery occlusion in fetal sheep

Lantto, J., Erkinaro, T., Haapsamo, M., Huhta, H., Voipio, H. M., Hohimer, A. R., Davis, L., Acharya, G. & Rasanen, J., Feb 1 2019, In : Experimental Physiology. 104, 2, p. 189-198 10 p.

Research output: Contribution to journalArticle

Foramen Ovale
Pulmonary Artery
Sheep
Blood Volume
Cardiac Output
1 Citation (Scopus)

Frailty and clinical outcomes in chronic obstructive pulmonary disease

NETT Research Group, Feb 1 2019, In : Annals of the American Thoracic Society. 16, 2, p. 217-224 8 p.

Research output: Contribution to journalArticle

Chronic Obstructive Pulmonary Disease
Confidence Intervals
Emphysema
Forced Expiratory Volume
Phenotype

Frequency and Documentation of Medication Decisions on Discharge from the Hospital to Hospice Care

Kadoyama, K. L., Noble, B. N., Izumi, S., Fromme, E., Tjia, J., McPherson, M. L., Candrian, C. B., McGregor, J. C., Ku, I. Y. & Furuno, J. P., Jan 1 2019, In : Journal of the American Geriatrics Society.

Research output: Contribution to journalArticle

Hospice Care
Documentation
Patient Discharge Summaries
Laxatives
Opioid Analgesics

Frequency following responses to tone glides: Effects of frequency extent, direction, and electrode montage

Billings, C., Bologna, W. J., Muralimanohar, R. K., Madsen, B. M. & Molis, M., Jan 1 2019, In : Hearing Research.

Research output: Contribution to journalArticle

Electrodes
Speech Perception
Phonetics
Signal-To-Noise Ratio
Acoustics

Frequency of social contact in-person vs. on Facebook: An examination of associations with psychiatric symptoms in military veterans

Teo, A., Chan, B. K., Saha, S. S. & Nicolaidis, C., Jan 15 2019, In : Journal of Affective Disorders. 243, p. 375-380 6 p.

Research output: Contribution to journalArticle

Veterans
Psychiatry
Interpersonal Relations
Social Isolation
Mental Health Associations
1 Citation (Scopus)

From #MeToo to #TimesUp in health care: can a culture of accountability end inequity and harassment?

Choo, E., Byington, C. L., Johnson, N. L. & Jagsi, R., Feb 9 2019, In : The Lancet. 393, 10171, p. 499-502 4 p.

Research output: Contribution to journalComment/debate

Social Responsibility
Delivery of Health Care

From clinical trials to real-world practice: Immune checkpoint inhibitors in older adults

Loh, K. P., Wong, M. L. & Maggiore, R., Jan 1 2019, In : Journal of Geriatric Oncology.

Research output: Contribution to journalEditorial

Pragmatic Clinical Trials
Clinical Trials

From process to progress—2017 International Conference on Neurofibromatosis 1, Neurofibromatosis 2 and Schwannomatosis

Ferner, R. E., Bakker, A., Elgersma, Y., Evans, D. G. R., Giovannini, M., Legius, E., Lloyd, A., Messiaen, L. M., Plotkin, S., Reilly, K. M., Schindeler, A., Smith, M. J., Ullrich, N. J., Widemann, B. & Sherman, L. L., Jan 1 2019, In : American Journal of Medical Genetics, Part A.

Research output: Contribution to journalArticle

Neurofibromatosis 2
Neurofibromatoses
Neurofibromatosis 1
Nervous System Neoplasms
Nerve Sheath Neoplasms

From the Outside In: Biological Mechanisms Linking Social and Environmental Exposures to Chronic Disease and to Health Disparities

Bagby, S., Martin, D., Chung, S. T. & Rajapakse, N., Jan 1 2019, In : American Journal of Public Health. 109, S1, p. S56-S63

Research output: Contribution to journalArticle

Environmental Exposure
Chronic Disease
Health
Population
Biological Models

Frustration with feeling: Latent classes of non-suicidal self-injury and emotion regulation difficulties

Peterson, A. L., Chen, J., Karver, M. S. & Labouliere, C. D., May 1 2019, In : Psychiatry Research. 275, p. 61-70 10 p.

Research output: Contribution to journalArticle

Frustration
Emotions
Wounds and Injuries
Impulsive Behavior
Suicide

Functional characterization of activating mutations in the sulfonylurea receptor 1 (ABCC8) causing neonatal diabetes mellitus in Asian Indian children

Balamurugan, K., Kavitha, B., Yang, Z., Mohan, V., Radha, V. & Shyng, S-L., Jan 1 2019, In : Pediatric Diabetes.

Research output: Contribution to journalArticle

Sulfonylurea Receptors
Diabetes Mellitus
Adenosine Triphosphate
Mutation
Adenosine Diphosphate

Gender, Professional Experiences, and Personal Characteristics of Academic Radiation Oncology Chairs: Data to Inform the Pipeline for the 21st Century

Beeler, W. H., Griffith, K. A., Jones, R. D., Chapman, C. H., Holliday, E. B., Lalani, N., Wilson, E., Bonner, J. A., Formenti, S. C., Hahn, S. M., Kalnicki, S., Liu, F. F., Movsas, B., Thomas, C. & Jagsi, R., Jan 1 2019, In : International Journal of Radiation Oncology Biology Physics.

Research output: Contribution to journalArticle

Radiation Oncology
leadership
seats
radiation
Appointments and Schedules

Gender Confirmation Surgery for the Endocrinologist

Narayan, S. K., Morrison, T., Dugi, D., Mosser, S. & Berli, J., Jan 1 2019, In : Endocrinology and Metabolism Clinics of North America.

Research output: Contribution to journalReview article

Transgender Persons
Hormones
Patient Education
Decision Making
Patient Care

Gender-confirming Rhinoplasty

Berli, J. & Loyo, M., May 1 2019, In : Facial plastic surgery clinics of North America. 27, 2, p. 251-260 10 p.

Research output: Contribution to journalReview article

Rhinoplasty
Population
Patient Care
Referral and Consultation

Gender Differences in the Quality of EMS Care Nationwide for Chest Pain and Out-of-Hospital Cardiac Arrest

Lewis, J. F., Zeger, S. L., Li, X., Mann, N. C., Newgard, C., Haynes, S., Wood, S. F., Dai, M., Simon, A. E. & McCarthy, M. L., Mar 1 2019, In : Women's Health Issues. 29, 2, p. 116-124 9 p.

Research output: Contribution to journalArticle

Out-of-Hospital Cardiac Arrest
medical services
Emergency Medical Services
Chest Pain
pain

Generalizability of Total Worker Health ® Online Training for Young Workers

Aryal, A., Parish, M. & Rohlman, D., Feb 16 2019, In : International journal of environmental research and public health. 16, 4

Research output: Contribution to journalArticle

Open Access
Health
Safety
Workplace
Safety Management
Aptitude

Generation of induced pluripotent stem cell-like lines from human pancreatic ductal adenocarcinoma

Kim, J. & Zaret, K. S., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 33-53 21 p. (Methods in Molecular Biology; vol. 1882).

Research output: Chapter in Book/Report/Conference proceedingChapter

Induced Pluripotent Stem Cells
Adenocarcinoma
Cell Line
Technology
Neoplasms

Genetic and molecular reappraisal of spindle cell adamantinoma of bone reveals a small subset of misclassified intraosseous synovial sarcoma

Horvai, A., Dashti, N. K., Rubin, B. P., Kilpatrick, S. E., Rudzinski, E. R., Lopez-Terrada, D., Hubley, M. B., Davis, J. & Fritchie, K., Feb 1 2019, In : Modern Pathology. 32, 2, p. 231-241 11 p.

Research output: Contribution to journalArticle

Adamantinoma
Synovial Sarcoma
Molecular Biology
Bone and Bones
Keratins

Genetic Architecture of Human Obesity Traits in the Rhesus Macaque

Raboin, M. J., Letaw, J., Mitchell, A. D., Toffey, D., McKelvey, J., Roberts, C. T., Curran, J. E. & Vinson, A., Mar 1 2019, In : Obesity. 27, 3, p. 479-488 10 p.

Research output: Contribution to journalArticle

Medical Genetics
Macaca mulatta
Adiposity
Obesity
Brain-Derived Neurotrophic Factor

Genetic control of the mouse HDL proteome defines HDL traits, function, and heterogeneity

Pamir, N., Pan, C., Plubell, D. L., Hutchins, P. M., Tang, C., Wimberger, J., Irwin, A., De Aguiar Vallim, T. Q., Heinecke, J. W. & Lusis, A. J., Jan 1 2019, In : Journal of lipid research. 60, 3, p. 594-608 15 p.

Research output: Contribution to journalArticle

Open Access
Proteome
Proteins
Cholesterol Esters
Quantitative Trait Loci
Sterols

Genetic data from nearly 63,000 women of European descent predicts DNA methylation biomarkers and epithelial ovarian cancer risk

Yang, Y., Wu, L., Shu, X., Lu, Y., Shu, X. O., Cai, Q., Beeghly-Fadiel, A., Li, B., Ye, F., Berchuck, A., Anton-Culver, H., Banerjee, S., Benitez, J., Bjørge, L., Brenton, J. D., Butzow, R., Campbell, I. G., Chang-Claude, J., Chen, K., Cook, L. S. & 79 othersCramer, D. W., De Fazio, A., Dennis, J., Doherty, J. A., Eccles, D. M., Edwards, D. V., Fasching, P. A., Fortner, R. T., Gayther, S. A., Giles, G. G., Glasspool, R. M., Goode, E. L., Goodman, M. T., Gronwald, J., Harris, H. R., Heitz, F., Hildebrandt, M. A., Høgdall, E., Høgdall, C. K., Huntsman, D. G., Kar, S. P., Karlan, B. Y., Kelemen, L. E., Kiemeney, L. A., Kjaer, S. K., Koushik, A., Lambrechts, D., Le, N. D., Levine, D. A., Massuger, L. F., Matsuo, K., May, T., McNeish, I. A., Menon, U., Modugno, F., Monteiro, A. N., Moorman, P. G., Moysich, K. B., Ness, R. B., Nevanlinna, H., Olsson, H., Charlotte Onland-Moret, N., Park, S. K., Paul, J., Pearce, C. L., Pejovic, T., Phelan, C. M., Pike, M. C., Ramus, S. J., Riboli, E., Rodriguez-Antona, C., Romieu, I., Sandler, D. P., Schildkraut, J. M., Setiawan, V. W., Shan, K., Siddiqui, N., Sieh, W., Stampfer, M. J., Sutphen, R., Swerdlow, A. J., Szafron, L. M., Teo, S. H., Tworoger, S. S., Tyrer, J. P., Webb, P. M., Wentzensen, N., White, E., Willett, W. C., Wolk, A., Woo, Y. L., Wu, A. H., Yan, L., Yannoukakos, D., Chenevix-Trench, G., Sellers, T. A., Pharoah, P. D. P., Zheng, W. & Long, J., Feb 1 2019, In : Cancer Research. 79, 3, p. 505-517 13 p.

Research output: Contribution to journalArticle

DNA Methylation
Biomarkers
Methylation
Genome-Wide Association Study
Ovarian epithelial cancer

Genetics of sanguinis-Group Streptococci in Health and Disease

Nobbs, A. & Kreth, J., Jan 1 2019, In : Microbiology spectrum. 7, 1

Research output: Contribution to journalArticle

health and disease
Streptococcus
biofilm
microbial community
commensal

Genistein treatment duration effects biomarkers of cell motility in human prostate

Zhang, H., Gordon, R., Li, W., Yang, X., Pattanayak, A., Fowler, G., Zhang, L., Catalona, W. J., Ding, Y., Xu, L., Huang, X., Jovanovic, B., Kelly, D. L., Jiang, H. & Bergan, R., Mar 1 2019, In : PloS one. 14, 3, e0214078.

Research output: Contribution to journalArticle

Open Access
Genistein
genistein
Biomarkers
cell movement
Cell Movement
1 Citation (Scopus)
Uniparental Disomy
Smoking
Alleles
Alcohols
Genome
1 Citation (Scopus)

Genome-wide screening of potential RNase Y-processed mRNAs in the M49 serotype Streptococcus pyogenes NZ131

Chen, Z., Raghavan, R., Qi, F., Merritt, J. & Kreth, J., Apr 1 2019, In : MicrobiologyOpen. 8, 4, e00671.

Research output: Contribution to journalArticle

Open Access
Streptococcus pyogenes
Ribonucleases
Genome
Messenger RNA
Streptococcus
1 Citation (Scopus)

Genomic alterations important for the prognosis in patients with follicular lymphoma treated in SWOG study S0016

Qu, X., Li, H., Braziel, R., Passerini, V., Rimsza, L. M., His, E. D., Leonard, J. P., Smith, S. M., Kridel, R., Press, O., Weigert, O., LeBlanc, M., Friedberg, J. W. & Fang, M., Jan 3 2019, In : Blood. 133, 1, p. 81-93 13 p.

Research output: Contribution to journalArticle

Follicular Lymphoma
Aberrations
Loss of Heterozygosity
Disease-Free Survival
Chromosomes

Genotype Differences in Sensitivity to the Anticonvulsant Effect of the Synthetic Neurosteroid Ganaxolone during Chronic Ethanol Withdrawal

Nipper, M. A., Jensen, J. P., Helms, M. L., Ford, M., Crabbe, J. J., Rossi, D. J. & Finn, D. D., Jan 15 2019, In : Neuroscience. 397, p. 127-137 11 p.

Research output: Contribution to journalArticle

Anticonvulsants
Pregnanolone
Neurotransmitter Agents
Seizures
Ethanol
1 Citation (Scopus)

Genotypic and Mechanistic Characterization of Subtype-Specific HIV Adaptation to Host Cellular Immunity

Kinloch, N. N., Lee, G. Q., Carlson, J. M., Jin, S. W., Brumme, C. J., Byakwaga, H., Muzoora, C., Bwana, M. B., Cobarrubias, K. D., Hunt, P. W., Martin, J. N., Carrington, M., Bangsberg, D., Harrigan, P. R., Brockman, M. A. & Brumme, Z. L., Jan 1 2019, In : Journal of Virology. 93, 1

Research output: Contribution to journalArticle

HLA Antigens
Cellular Immunity
cell-mediated immunity
HIV
microbial genetics

Geographical disparity and traumatic brain injury in America: Rural areas suffer poorer outcomes

Brown, J. B., Kheng, M., Carney, N., Rubiano, A. M. & Puyana, J. C., Jan 1 2019, In : Journal of Neurosciences in Rural Practice. 10, 1, p. 10-15 6 p.

Research output: Contribution to journalArticle

Traumatic Brain Injury
Geography
Mortality
Linear Models
Confidence Intervals
1 Citation (Scopus)

Geographical variation and predictors of physical activity level in adults with congenital heart disease

APPROACH-IS Consortium & the International Society for Adult Congenital Heart Disease (ISACHD), Mar 1 2019, In : IJC Heart and Vasculature. 22, p. 20-25 6 p.

Research output: Contribution to journalArticle

Open Access
Heart Diseases
Exercise
Metabolic Equivalent
Health Behavior
Health