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  Transcriptional network analysis of human astrocytic endfoot genes reveals region-specific associations with dementia status and tau pathology

  Simon, M. J., Wang, M. X., Murchison, C. F., Roese, N. E., Boespflug, E., Woltjer, R. L. & Iliff, J., Dec 1 2018, In: Scientific Reports. 8, 1, 12389.

  Research output: Contribution to journal › Article › peer-review
  19 Scopus citations

• Transcriptional profiling identifies an androgen receptor activity-low, stemness program associated with enzalutamide resistance

  Alumkal, J. J., Sun, D., Lu, E., Beer, T. M., Thomas, G. V., Latour, E., Aggarwal, R., Cetnar, J., Ryan, C. J., Tabatabaei, S., Bailey, S., Turina, C. B., Quigley, D. A., Guan, X., Foye, A., Youngren, J. F., Urrutia, J., Huangi, J., Weinstein, A. S., Friedl, V. & 11 others, Rettig, M., Reiter, R. E., Spratt, D. E., Gleav, M., Evans, C. P., Stuart, J. M., Chen, Y., Feng, F. Y., Small, E. J., Witte, O. N. & Xia, Z., Jun 2 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 22, p. 12315-12323 9 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  29 Scopus citations

• Transcriptional profiling identifies caspase-1 as a T cell–intrinsic regulator of Th17 differentiation

  Gao, Y., Deason, K., Jain, A., Irizarry-Caro, R. A., Dozmorov, I., Coughlin, L. A., Rauch, I., Evers, B. M., Koh, A. Y., Wakeland, E. K. & Pasare, C., 2020, In: Journal of Experimental Medicine. 217, 4, e20190476.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  7 Scopus citations

• Transcriptional profiling of newly generated dentate granule cells using TU tagging reveals pattern shifts in gene expression during circuit integration

  Chatzi, C., Zhang, Y., Shen, R., Westbrook, G. L. & Goodman, R. H., 2016, In: eNeuro. 3, 1, p. 589-596 8 p.

  Research output: Contribution to journal › Article › peer-review
  16 Scopus citations

• Transcriptional profiling of rapamycin-treated fibroblasts from hypertrophic and keloid scars

  Wong, V. W., You, F., Januszyk, M., Gurtner, G. C. & Kuang, A. A., Jun 2014, In: Annals of plastic surgery. 72, SUPPL. 2, p. 711-719 9 p.

  Research output: Contribution to journal › Article › peer-review
  30 Scopus citations

• Transcriptional profiling of rhesus monkey embryonic stem cells

  Byrne, J. A., Mitalipov, S. M., Clepper, L. & Wolf, D. P., Dec 2006, In: Biology of reproduction. 75, 6, p. 908-915 8 p.

  Research output: Contribution to journal › Article › peer-review
  21 Scopus citations

• Transcriptional program associated with IFN-α response of renal cell carcinoma

  Banerjee, D., Chadalavada, R. S. V., Bourdon, V., Korkola, J. E., Motzer, R. J. & Chaganti, R. S. K., Mar 2006, In: Journal of Interferon and Cytokine Research. 26, 3, p. 156-170 15 p.

  Research output: Contribution to journal › Article › peer-review
  2 Scopus citations

• Transcriptional programming in arteriosclerotic,disease; A Multifaceted Function of the Runx2 (Runt-Related Transcription Factor 2)

  Chen, Y., Zhao, X. & Wu, H., Jan 2021, In: Arteriosclerosis, thrombosis, and vascular biology. 41, 1, p. 20-34 15 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  8 Scopus citations

• Transcriptional Programming of Normal and Inflamed Human Epidermis at Single-Cell Resolution

  Cheng, J. B., Sedgewick, A. J., Finnegan, A. I., Harirchian, P., Lee, J., Kwon, S., Fassett, M. S., Golovato, J., Gray, M., Ghadially, R., Liao, W., Perez White, B. E., Mauro, T. M., Mully, T., Kim, E. A., Sbitany, H., Neuhaus, I. M., Grekin, R. C., Yu, S. S., Gray, J. W. & 6 others, Purdom, E., Paus, R., Vaske, C. J., Benz, S. C., Song, J. S. & Cho, R. J., Oct 23 2018, In: Cell Reports. 25, 4, p. 871-883 13 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  93 Scopus citations

• Transcriptional regulation and specification of neural stem cells.

  Christie, K. J., Emery, B., Denham, M., Bujalka, H., Cate, H. S. & Turnley, A. M., 2013, In: Advances in Experimental Medicine and Biology. 786, p. 129-155 27 p.

  Research output: Contribution to journal › Article › peer-review

• Transcriptional regulation by p53 through intrinsic DNA/chromatin binding and site-directed cofactor recruitment

  Espinosa, J. M. & Emerson, B. M., 2001, In: Molecular Cell. 8, 1, p. 57-69 13 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  361 Scopus citations

• Transcriptional regulation of an axonemal central apparatus gene, sperm-associated antigen 6, by a SRY-related high mobility group transcription factor, S-SOX5

  Kiselak, E. A., Shen, X., Song, J., Gude, D. R., Wang, J., Brody, S. L., Strauss, J. F. & Zhang, Z., Oct 1 2010, In: Journal of Biological Chemistry. 285, 40, p. 30496-30505 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  50 Scopus citations

• Transcriptional regulation of APOBEC3G, a cytidine deaminase that hypermutates human immunodeficiency virus

  Rose, K. M., Marin, M., Kozak, S. L. & Kabat, D., Oct 1 2004, In: Journal of Biological Chemistry. 279, 40, p. 41744-41749 6 p.

  Research output: Contribution to journal › Article › peer-review
  75 Scopus citations

• Transcriptional regulation of IGF-I receptor gene expression by novel isoforms of the EWS-WT1 fusion protein

  Finkeltov, I., Kuhn, S., Glaser, T., Idelman, G., Wright, J. J., Roberts, C. & Werner, H., Mar 14 2002, In: Oncogene. 21, 12, p. 1890-1898 9 p.

  Research output: Contribution to journal › Article › peer-review

• Transcriptional regulation of IGF-I receptor gene expression by novel isoforms of the EWS-WT1 fusion protein

  Finkeltov, I., Kuhn, S., Glaser, T., Idelman, G., Wright, J. J., Roberts, C. T. & Werner, H., 2002, In: Oncogene. 21, 12, p. 1890-1898 9 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  34 Scopus citations

• Transcriptional Regulation of Insulin-like Growth Factor-I by Interferon-γ Requires STAT-5b

  Hwa, V., Little, B., Kofoed, E. M. & Rosenfeld, R. G., Jan 23 2004, In: Journal of Biological Chemistry. 279, 4, p. 2728-2736 9 p.

  Research output: Contribution to journal › Article › peer-review
  49 Scopus citations

• Transcriptional regulation of insulin-like growth factor-I receptor gene expression in prostate cancer cells

  Damon, S. E., Plymate, S. R., Carroll, J. M., Sprenger, C. C., Dechsukhum, C., Ware, J. L. & Roberts, C. T., 2001, In: Endocrinology. 142, 1, p. 21-27 7 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  48 Scopus citations

• Transcriptional regulation of the Bacillus subtilis menp1 promoter

  Qin, X. & Taber, H. W., Feb 1996, In: Journal of bacteriology. 178, 3, p. 705-713 9 p.

  Research output: Contribution to journal › Article › peer-review
  9 Scopus citations

• Transcriptional regulation of the BCL-X gene by NF-κB is an element of hypoxic responses in the rat brain

  Glasgow, J. N., Qiu, J. X., Rassin, D., Grafe, M., Wood, T. & Perez-Polo, J. R., 2001, In: Neurochemical Research. 26, 6, p. 647-659 13 p., 344958.

  Research output: Contribution to journal › Article › peer-review
  55 Scopus citations

• Transcriptional regulation of the human cytomegalovirus major immediate-early gene is associated with induction of DNase I-hypersensitive sites

  Nelson, J. A. & Groudine, M., 1986, In: Molecular and cellular biology. 6, 2, p. 452-461 10 p.

  Research output: Contribution to journal › Article › peer-review
  67 Scopus citations

• Transcriptional regulation of the human KiSS1 gene

  Mueller, J. K., Dietzel, A., Lomniczi, A., Loche, A., Tefs, K., Kiess, W., Danne, T., Ojeda, S. & Heger, S., Aug 6 2011, In: Molecular and Cellular Endocrinology. 342, 1-2, p. 8-19 12 p.

  Research output: Contribution to journal › Article › peer-review
  56 Scopus citations

• Transcriptional regulation of the IL-1β gene following GM-CSF and TNF stimulation of PMN

  Fernandez, M., Walters, J. & Marucha, P., Dec 1 1996, In: FASEB Journal. 10, 6, p. A1327

  Research output: Contribution to journal › Article › peer-review

• Transcriptional regulation of the prolactin gene by ergocryptine and cyclic AMP

  Maurer, R. A., Dec 1 1981, In: Nature. 294, 5836, p. 94-97 4 p.

  Research output: Contribution to journal › Article › peer-review
  191 Scopus citations

• Transcriptional regulation of the tyrosine hydroxylase gene by glucocorticoid and cyclic AMP

  Lewis, E. J., Harrington, C. A. & Chikaraishi, D. M., 1987, In: Proceedings of the National Academy of Sciences of the United States of America. 84, 11, p. 3550-3554 5 p.

  Research output: Contribution to journal › Article › peer-review
  299 Scopus citations

• Transcriptional regulatory networks downstream of TAL1/SCL in T-cell acute lymphoblastic leukemia

  Palomero, T., Odom, D. T., O'Neil, J., Ferrando, A. A., Margolin, A., Neuberg, D. S., Winter, S. S., Larson, R. S., Li, W., Liu, X. S., Young, R. A. & Look, A. T., Aug 1 2006, In: Blood. 108, 3, p. 986-992 7 p.

  Research output: Contribution to journal › Article › peer-review
  59 Scopus citations

• Transcriptional repression of the insulin-like growth factor I receptor (IGF-I-R) gene by the tumor suppressor WT1 involves binding to sequences both upstream and downstream of the IGF-I-R gene transcription start site

  Werner, H., Rauscher, F. J., Sukhatme, V. P., Drummond, I. A., Roberts, C. T. & LeRoith, D., 1994, In: Journal of Biological Chemistry. 269, 17, p. 12577-12582 6 p.

  Research output: Contribution to journal › Article › peer-review
  144 Scopus citations

• Transcriptional responses of cultured rat sympathetic neurons during BMP-7-induced dendritic growth

  Garred, M. M., Wang, M. M., Guo, X., Harrington, C. A. & Lein, P. J., 2011, In: PloS one. 6, 7, e21754.

  Research output: Contribution to journal › Article › peer-review
  11 Scopus citations

• Transcriptional responses to tubule challenges

  Gullans, S. R., Cohen, D. M., Kojima, R., Randall, J., Brenner, B. M., Santos, B. & Chevaile, A., 1996, In: Kidney International. 49, 6, p. 1678-1681 4 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  8 Scopus citations

• Transcriptional signature primes human oral mucosa for rapid wound healing

  Iglesias-Bartolome, R., Uchiyama, A., Molinolo, A. A., Abusleme, L., Brooks, S. R., Callejas-Valera, J. L., Edwards, D., Doci, C., Asselin-Labat, M. L., Onaitis, M. W., Moutsopoulos, N. M., Silvio Gutkind, J. & Morasso, M. I., Jul 25 2018, In: Science translational medicine. 10, 451, eaap8798.

  Research output: Contribution to journal › Article › peer-review
  65 Scopus citations

• Transcriptional signatures in histologic structures within glioblastoma tumors may predict personalized drug sensitivity and survival

  Kersch, C. N., Claunch, C. J., Ambady, P., Bucher, E., Schwartz, D. L., Barajas, R. F., Iliff, J. J., Risom, T., Heiser, L., Muldoon, L. L., Korkola, J. E., Gray, J. W. & Neuwelt, E. A., Jan 1 2020, In: Neuro-Oncology Advances. 2, 1, vdaa093.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  2 Scopus citations

• Transcriptional signatures of cellular plasticity in mice lacking the α1 subunit of GABA_A receptors

  Ponomarev, I., Maiya, R., Harnett, M. T., Schafer, G. L., Ryabinin, A. E., Blednov, Y. A., Morikawa, H., Boehm, S. L., Homanics, G. E., Berman, A., Lodowski, K. H., Bergeson, S. E. & Adron Harris, R., 2006, In: Journal of Neuroscience. 26, 21, p. 5673-5683 11 p.

  Research output: Contribution to journal › Article › peer-review
  52 Scopus citations

• Transcriptional specificity of human SWI/SNF BRG1 and BRM chromatin remodeling complexes

  Kadam, S. & Emerson, B. M., Feb 1 2003, In: Molecular Cell. 11, 2, p. 377-389 13 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  281 Scopus citations

• Transcriptional therapy with the histone deacetylase inhibitor trichostatin A ameliorates experimental autoimmune encephalomyelitis

  Camelo, S., Iglesias, A. H., Hwang, D., Due, B., Ryu, H., Smith, K., Gray, S. G., Imitola, J., Duran, G., Assaf, B., Langley, B., Khoury, S. J., Stephanopoulos, G., De Girolami, U., Ratan, R. R., Ferrante, R. J. & Dangond, F., Jul 2005, In: Journal of Neuroimmunology. 164, 1-2, p. 10-21 12 p.

  Research output: Contribution to journal › Article › peer-review
  241 Scopus citations

• Transcriptional up-regulation of the human androgen receptor by androgen in bone cells

  Wiren, K. M., Zhang, X., Chang, C., Keenan, E. & Orwoll, E. S., 1997, In: Endocrinology. 138, 6, p. 2291-2300 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  86 Scopus citations

• Transcription factor-driven alternative localization of Cryptococcus neoformans superoxide dismutase

  Smith, A. D., Garcia-Santamarina, S., Ralle, M., Loiselle, D. R., Haystead, T. A. & Thiele, D. J., Jan 1 2021, In: Journal of Biological Chemistry. 296, 100391.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  2 Scopus citations

• Transcription factor dynamics and neuroendocrine signalling in the mouse pineal gland: A comparative analysis of melatonin-deficient C57BL mice and melatonin-proficient C3H mice

  Von Gall, C., Lewy, A., Schomerus, C., Vivien-Roels, B., Pevét, P., Korf, H. W. & Stehle, J. H., Apr 5 2000, In: European Journal of Neuroscience. 12, 3, p. 964-972 9 p.

  Research output: Contribution to journal › Article › peer-review
  84 Scopus citations

• Transcription Factor E2F3a in Nucleus Accumbens Affects Cocaine Action via Transcription and Alternative Splicing

  Cates, H. M., Heller, E. A., Lardner, C. K., Purushothaman, I., Peña, C. J., Walker, D. M., Cahill, M. E., Neve, R. L., Shen, L., Bagot, R. C. & Nestler, E. J., Aug 1 2018, In: Biological Psychiatry. 84, 3, p. 167-179 13 p.

  Research output: Contribution to journal › Article › peer-review
  16 Scopus citations

• Transcription factor FOXO3a controls the persistence of memory CD4 ⁺ T cells during HIV infection

  Van Grevenynghe, J., Procopio, F. A., He, Z., Chomont, N., Riou, C., Zhang, Y., Gimmig, S., Boucher, G., Wilkinson, P., Shi, Y., Yassine-Diab, B., Said, E. A., Trautmann, L., Far, M. E., Balderas, R. S., Boulassel, M. R., Routy, J. P., Haddad, E. K. & Sekaly, R. P., Mar 2008, In: Nature medicine. 14, 3, p. 266-274 9 p.

  Research output: Contribution to journal › Article › peer-review
  128 Scopus citations

• Transcription factor Foxp1 exerts essential cell-intrinsic regulation of the quiescence of naive T cells

  Feng, X., Wang, H., Takata, H., Day, T. J., Willen, J. & Hu, H., Jun 2011, In: Nature Immunology. 12, 6, p. 544-550 7 p.

  Research output: Contribution to journal › Article › peer-review
  127 Scopus citations

• Transcription factor interactions and chromatin modifications associated with p53-mediated, developmental repression of the alpha-fetoprotein gene

  Nguyen, T. T., Cho, K., Stratton, S. A. & Barton, M. C., Mar 2005, In: Molecular and cellular biology. 25, 6, p. 2147-2157 11 p.

  Research output: Contribution to journal › Article › peer-review
  51 Scopus citations

• Transcription factor NsrR from Bacillus subtilis senses nitric oxide with a 4Fe-4S cluster

  Yukl, E. T., Elbaz, M. A., Nakano, M. M. & Moènne-Loccoz, P., Dec 9 2008, In: Biochemistry. 47, 49, p. 13084-13092 9 p.

  Research output: Contribution to journal › Article › peer-review
  89 Scopus citations

• Transcription factor p63 controls the reserve status but not the stemness of horizontal basal cells in the olfactory epithelium

  Schnittke, N., Herrick, D. B., Lin, B., Peterson, J., Coleman, J. H., Packard, A. I., Jang, W. & Schwob, J. E., Sep 8 2015, In: Proceedings of the National Academy of Sciences of the United States of America. 112, 36, p. E5068-E5077

  Research output: Contribution to journal › Article › peer-review
  48 Scopus citations

• Transcription factor Pebbled/RREB1 regulates injury-induced axon degeneration

  Farley, J. E., Burdett, T. C., Barria, R., Neukomm, L. J., Kenna, K. P., Landers, J. E. & Freeman, M. R., Feb 6 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 6, p. 1358-1363 6 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  27 Scopus citations

• Transcription factors are present in fetal calf serum

  Knepper, P. A., Mayanil, C. S. K., Hayes, E. & Lindemulder, S. J., Feb 15 1996, In: Investigative Ophthalmology and Visual Science. 37, 3, p. S824

  Research output: Contribution to journal › Article › peer-review

• Transcription from the P₃ promoter of the Bacillus subtilis spx gene is induced in response to bisulfide stress

  Leelakriangsak, M. & Zuber, P., Mar 2007, In: Journal of bacteriology. 189, 5, p. 1727-1735 9 p.

  Research output: Contribution to journal › Article › peer-review
  26 Scopus citations

• Transcription initiation in the two leader exons of the rat IGF-I gene occurs from disperse versus localized sites

  Adamo, M. L., Ben-Hur, H., Leroith, D. & Roberts, C. T., Apr 30 1991, In: Biochemical and Biophysical Research Communications. 176, 2, p. 887-893 7 p.

  Research output: Contribution to journal › Article › peer-review
  89 Scopus citations

• Transcription initiation region of the srfA operon, which is controlled by the comP-comA signal transduction system in Bacillus subtilis

  Nakano, M. M., Xia, L. & Zuber, P., 1991, In: Journal of bacteriology. 173, 17, p. 5487-5493 7 p.

  Research output: Contribution to journal › Article › peer-review
  125 Scopus citations

• Transcription intermediary factor 1γ decreases protein expression of the transcriptional cofactor, LIM-domain-binding 1

  Howard, P. W., Ransom, D. G. & Maurer, R. A., Jun 4 2010, In: Biochemical and Biophysical Research Communications. 396, 3, p. 674-678 5 p.

  Research output: Contribution to journal › Article › peer-review
  5 Scopus citations

• Transcription of chromatin: These are complex times

  Armstrong, J. A. & Emerson, B. M., Apr 1998, In: Current Opinion in Genetics and Development. 8, 2, p. 165-172 8 p.

  Research output: Contribution to journal › Article › peer-review
  79 Scopus citations

• Transcription of spacer sequences flanking the rat 45S ribosomal DNA gene

  Harrington, C. A. & Chikaraishi, D. M., 1987, In: Molecular and cellular biology. 7, 1, p. 314-325 12 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  13 Scopus citations