Find Publications


A Multicenter Evaluation of a Firearm Safety Intervention in the Pediatric Outpatient Setting

Campbell, B. T., Thaker, S., Fallat, M. E., Foley, D. S., McClure, E., Sakran, J. V., Nasr, I. W., Ziegfeld, S., Ehrlich, P. F., Snodgrass, M., Levy, M., Naik-Mathuria, B. J., Johnson, B., Demello, A. S., Jones, S., Watters, J. M., Burke, P., Allee, L., Kozyckyj, T., Letton, R. W. & 3 others, Kuhls, D. A., Bulger, E. M. & Stewart, R. M., Jan 1 2019, (Accepted/In press) In : Journal of pediatric surgery.

Research output: Contribution to journalReview article


A Multi-study Coordinated Meta-analysis of Pulmonary Function and Cognition in Aging

Duggan, E. C., Piccinin, A. M., Clouston, S., Koval, A. V., Robitaille, A., Zammit, A. R., Wu, C., Brown, C. L., Lee, L. O., Finkel, D., Beasley, W. H., Kaye, J., Terrera, G. M., Katz, M., Lipton, R. B., Deeg, D., Bennett, D. A., Praetorius Björk, M., Johansson, B., Spiro, A. & 2 others, Weuve, J. & Hofer, S. M., Oct 4 2019, In : Journals of Gerontology - Series A Biological Sciences and Medical Sciences. 74, 11, p. 1793-1804 12 p.

Research output: Contribution to journalArticle

Open Access
Longitudinal Studies

A multitask multiple kernel learning algorithm for survival analysis with application to cancer biology

Dereli, O., Oǧuz, C. & Gönen, M., Jan 1 2019, 36th International Conference on Machine Learning, ICML 2019. International Machine Learning Society (IMLS), p. 2844-2853 10 p. (36th International Conference on Machine Learning, ICML 2019; vol. 2019-June).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Learning algorithms
2 Citations (Scopus)

Amyloid beta and micrornas in Alzheimer's disease

Amakiri, N., Kubosumi, A., Tran, J. & Reddy, P. H., Jan 1 2019, In : Frontiers in Neuroscience. 13, MAY, 430.

Research output: Contribution to journalReview article

Open Access
Alzheimer Disease
Amyloid beta-Protein Precursor
Molecular Biology
13 Citations (Scopus)

Amyloid β oligomers constrict human capillaries in alzheimer’s disease via signaling to pericytes

Nortley, R., Korte, N., Izquierdo, P., Hirunpattarasilp, C., Mishra, A., Jaunmuktane, Z., Kyrargyri, V., Pfeiffer, T., Khennouf, L., Madry, C., Gong, H., Richard-Loendt, A., Huang, W., Saito, T., Saido, T. C., Brandner, S., Sethi, H. & Attwell, D., Jan 1 2019, In : Science.

Research output: Contribution to journalArticle

Alzheimer Disease
Cerebrovascular Circulation

An abundance of seafood consumption studies presents new opportunities to evaluate effects on neurocognitive development

Spiller, P., Hibbeln, J. R., Myers, G., Vannice, G., Golding, J., Crawford, M. A., Strain, J. J., Connor, S. L., Brenna, J. T., Kris-Etherton, P., Holub, B. J., Harris, W. S., Lands, B., McNamara, R. K., Tlusty, M. F., Salem, N. & Carlson, S. E., Dec 2019, In : Prostaglandins Leukotrienes and Essential Fatty Acids. 151, p. 8-13 6 p.

Research output: Contribution to journalReview article

Open Access
Food safety
1 Citation (Scopus)

Anal intraepithelial neoplasia: Diagnosis, screening, and treatment

Siddharthana, R. V., Lanciault, C. & Tsikitis, V., May 3 2019, In : Annals of Gastroenterology. 32, 3, p. 257-263 7 p.

Research output: Contribution to journalArticle

Open Access
Anus Neoplasms
Virus Diseases
1 Citation (Scopus)

Analysis of 100 high-coverage genomes from a pedigreed captive baboon colony

Robinson, J. A., Belsare, S., Birnbaum, S., Newman, D. E., Chan, J., Glenn, J. P., Ferguson, B., Cox, L. A. & Wall, J. D., May 1 2019, In : Genome Research. 29, 5, p. 848-856 9 p.

Research output: Contribution to journalArticle

Open Access

Analysis of Complications with Staged Surgery for Less Invasive Treatment of Adult Spinal Deformity

International Spine Study Group, Jan 1 2019, In : World Neurosurgery.

Research output: Contribution to journalArticle

Intraoperative Complications
Minimally Invasive Surgical Procedures
Nervous System
3 Citations (Scopus)
Drug Approval
Quality Control
Randomized Controlled Trials
Standard of Care
Antineoplastic Agents
12 Citations (Scopus)

Analysis of convective and diffusive transport in the brain interstitium

Ray, L., Iliff, J. & Heys, J. J., Mar 6 2019, In : Fluids and Barriers of the CNS. 16, 1, 6.

Research output: Contribution to journalArticle

Open Access
Research Personnel
2 Citations (Scopus)

Analysis of Diagnoses, Symptoms, Medications, and Admissions Among Patients With Cancer Presenting to Emergency Departments

Caterino, J. M., Adler, D., Durham, D. D., Yeung, S. C. J., Hudson, M. F., Bastani, A., Bernstein, S. L., Baugh, C. W., Coyne, C. J., Grudzen, C. R., Henning, D. J., Klotz, A., Madsen, T. E., Pallin, D. J., Reyes-Gibby, C. C., Rico, J. F., Ryan, R. J., Shapiro, N. I., Swor, R., Venkat, A. & 4 others, Wilson, J., Thomas, C., Bischof, J. J. & Lyman, G. H., Mar 1 2019, In : JAMA network open. 2, 3, p. e190979

Research output: Contribution to journalArticle

Open Access
Patient Admission
Hospital Emergency Service
Length of Stay
3 Citations (Scopus)

Analysis of HIV-1 Matrix-Envelope Cytoplasmic Tail Interactions

Alfadhli, A., Staubus, A. O., Tedbury, P. R., Novikova, M., Freed, E. O. & Barklis, E., Nov 1 2019, In : Journal of virology. 93, 21

Research output: Contribution to journalArticle

Human immunodeficiency virus 1
gag Gene Products

Analysis of interleukin-20 receptor complexes in trabecular meshwork cells and effects of cytokine signaling in anterior segment perfusion culture

Keller, K., Yang, Y. F., Sun, Y. Y., Walter, M. R. & Wirtz, M. K., Jan 1 2019, In : Molecular vision. 25, p. 266-282 17 p.

Research output: Contribution to journalArticle

Trabecular Meshwork
Radiation Oncology
Internship and Residency
Career Choice

Analysis of the ABCA4 c.[2588G>C;5603A>T] Allele in the Australian Population

Thompson, J. A., Chiang, J. P. W., De Roach, J. N., McLaren, T. L., Chen, F. K., Hoffmann, L., Campbell, I. & Lamey, T. M., Jan 1 2019, Advances in Experimental Medicine and Biology. Springer, p. 269-273 5 p. (Advances in Experimental Medicine and Biology; vol. 1185).

Research output: Chapter in Book/Report/Conference proceedingChapter

Retinal Diseases
Precision Medicine
3 Citations (Scopus)

Analysis of the MILES cohort reveals determinants of disease progression and treatment response in lymphangioleiomyomatosis

for the NIH Rare Lung Disease Consortium, Apr 1 2019, In : European Respiratory Journal. 53, 4, 1802066.

Research output: Contribution to journalArticle

Disease Progression
Cohort Studies
Bronchodilator Agents
1 Citation (Scopus)

Analytical and Clinical Validation of Expressed Variants and Fusions From the Whole Transcriptome of Thyroid FNA Samples

Angell, T. E., Wirth, L. J., Cabanillas, M. E., Shindo, M. L., Cibas, E. S., Babiarz, J. E., Hao, Y., Kim, S. Y., Walsh, P. S., Huang, J., Kloos, R. T., Kennedy, G. C. & Waguespack, S. G., Sep 11 2019, In : Frontiers in Endocrinology. 10, 612.

Research output: Contribution to journalArticle

Open Access
Thyroid Gland
Thyroid Nodule

Analytical Validation of a Highly Sensitive, Multiplexed Chronic Myeloid Leukemia Monitoring System Targeting BCR-ABL1 RNA

Brown, J. T., Beldorth, I. J., Laosinchai-Wolf, W., Fahey, M. E., Jefferson, K. L., Ruskin, A. K., Roth, J. J., Cai, L., Watt, C. D., Press, R., Yang, F., Hedges, J. B. & Andruss, B. F., Jul 1 2019, In : Journal of Molecular Diagnostics. 21, 4, p. 718-733 16 p.

Research output: Contribution to journalArticle

Open Access
Leukemia, Myelogenous, Chronic, BCR-ABL Positive
Protein-Tyrosine Kinases
Limit of Detection
Quality Control
3 Citations (Scopus)

An anaerobic bacterium host system for heterologous expression of natural product biosynthetic gene clusters

Hao, T., Xie, Z., Wang, M., Liu, L., Zhang, Y., Wang, W., Zhang, Z., Zhao, X., Li, P., Guo, Z., Gao, S., Lou, C., Zhang, G., Merritt, J., Horsman, G. P. & Chen, Y., Dec 1 2019, In : Nature communications. 10, 1, 3665.

Research output: Contribution to journalArticle

Open Access
Anaerobic Bacteria
Multigene Family
Biological Products

An analysis and metric of reusable data licensing practices for biomedical resources

Carbon, S., Champieux, R., McMurry, J. A., Winfree, L., Wyatt, L. R. & Haendel, M., Mar 1 2019, In : PloS one. 14, 3, e0213090.

Research output: Contribution to journalArticle

Open Access
research support
biomedical research

Anaplastic pleomorphic xanthoastrocytoma with leptomeningeal dissemination responsive to BRAF inhibition and bevacizumab

Thomas, A. A., Tucker, S. M., Nelson, C. J., Nickerson, J., Durham, S. R. & Homans, A. C., Jan 1 2019, In : Pediatric Blood and Cancer. 66, 1, e27465.

Research output: Contribution to journalLetter


An application of the Science Impact Framework to the Cancer Prevention and Control Research Network from 2014-2018

Ko, L. K., Jang, S. H., Friedman, D. B., Glanz, K., Leeman, J., Hannon, P. A., Shannon, J. J., Cole, A., Williams, R. & Vu, T., Jan 1 2019, (Accepted/In press) In : Preventive medicine. 105821.

Research output: Contribution to journalArticle

Centers for Disease Control and Prevention (U.S.)
Point-of-Care Systems
1 Citation (Scopus)
Sudden Cardiac Death
Cardiac Arrhythmias
Perioperative Period

A National Study of Oncology Nurses Discussing Cancer Clinical Trials With Patients

Flocke, S., Nock, N. L., Fulton, S., Margevicius, S., Manne, S., Meropol, N. J. & Daly, B. J., Jan 1 2019, In : Western journal of nursing research.

Research output: Contribution to journalArticle

Clinical Trials

Anatomical and diffusion MRI brain atlases of the fetal rhesus macaque brain at 85, 110 and 135 days gestation

Liu, Z., Wang, X., Newman, N., Grant, K. A., Studholme, C. & Kroenke, C. D., Jan 1 2019, (Accepted/In press) In : NeuroImage. 116310.

Research output: Contribution to journalArticle

Diffusion Magnetic Resonance Imaging
Macaca mulatta

Anatomical variation of the femoral nerve in the femoral triangle

Woodworth, G., Lee, T., Ivie, R. & Becket, B., Sep 1 2019, In : Regional anesthesia and pain medicine. 44, 9, p. 907-908 2 p.

Research output: Contribution to journalLetter

Femoral Nerve
Conduction Anesthesia
Lower Extremity

Anatomic Lead Placement Without Paresthesia Mapping Provides Effective and Predictable Therapy During the Trial Evaluation Period: Results From the Prospective, Multicenter, Randomized, DELIVERY Study

Pope, J. E., Schu, S., Sayed, D., Raslan, A., Baranidharan, G., Heros, R. D., Blomme, B., Capobianco, R. A. & Deer, T. R., Jan 1 2019, In : Neuromodulation.

Research output: Contribution to journalArticle

Spinal Cord Stimulation

A natural history model for planning prostate cancer testing: Calibration and validation using Swedish registry data

Karlsson, A., Jauhiainen, A., Gulati, R., Eklund, M., Grönberg, H., Etzioni, R. & Clements, M., Feb 1 2019, In : PloS one. 14, 2, e0211918.

Research output: Contribution to journalArticle

Open Access
prostatic neoplasms
Natural History
natural history
1 Citation (Scopus)
Ventricular Tachycardia
Ventricular Premature Complexes
Sensitivity and Specificity

Anesthesiology's Contribution to Environmental Preservation

Fink, R. J., Nov 1 2019, In : Anesthesia and analgesia. 129, 5, p. e179-e180

Research output: Contribution to journalArticle


A neutral lipid-enriched diet improves myelination and alleviates peripheral nerve pathology in neuropathic mice

Zhou, Y., Bazick, H., Miles, J. R., Fethiere, A. I., Salihi, M. O. A., Fazio, S., Tavori, H. & Notterpek, L., Nov 1 2019, In : Experimental Neurology. 321, 113031.

Research output: Contribution to journalArticle

Open Access
Peripheral Nerves
High Fat Diet

A new era for neuromyelitis optica spectrum disorder

Silbermann, E. & Bourdette, D., Oct 12 2019, In : The Lancet. 394, 10206, p. 1304-1305 2 p.

Research output: Contribution to journalComment/debate

Neuromyelitis Optica

An Examination of the Psychometric Properties of the Reasons for Living Inventory within a Male Veteran Clinical Sample

Chen, J., Osman, A., Freedenthal, S. L. & Gutierrez, P. M., Jan 1 2019, In : Archives of Suicide Research.

Research output: Contribution to journalArticle

Equipment and Supplies
Statistical Factor Analysis
4 Citations (Scopus)

Animal Models of Hypertension: A Scientific Statement From the American Heart Association

Lerman, L. O., Kurtz, T. W., Touyz, R. M., Ellison, D. H., Chade, A. R., Crowley, S. D., Mattson, D. L., Mullins, J. J., Osborn, J., Eirin, A., Reckelhoff, J. F., Iadecola, C. & Coffman, T. M., Jun 1 2019, In : Hypertension (Dallas, Tex. : 1979). 73, 6, p. e87-e120

Research output: Contribution to journalArticle

Open Access
Animal Models
Chronic Disease
Research Design

An interactive virtual reality tour for adolescents receiving proton radiation therapy: Proof-of-concept study

Galvez, J., Eisenhower, M., England, W., Wartman, E., Simpao, A., Rehman, M., Lustig, R. & Hribar, M., Mar 1 2019, In : Journal of medical Internet research. 21, 3, e11259.

Research output: Contribution to journalArticle

Open Access
Proton Therapy
User-Computer Interface
Patient Education
Diagnostic Imaging
1 Citation (Scopus)

An intramembrane sensory circuit monitors sortase A-mediated processing of streptococcal adhesins

Hall, J. W., Lima, B. P., Herbomel, G. G., Gopinath, T., McDonald, L. A., Shyne, M. T., Lee, J. K., Kreth, J., Ross, K. F., Veglia, G. & Herzberg, M. C., May 7 2019, In : Science signaling. 12, 580

Research output: Contribution to journalArticle

Cell membranes
Networks (circuits)

An in vitro comparison of ultraviolet versus white light in the detection of adhesive remnants during orthodontic debonding

Lai, C., Bush, P. J. B., Warunek, S., Covell, D. & Al-Jewair, T., Jan 1 2019, In : Angle Orthodontist. 89, 3, p. 438-445 8 p.

Research output: Contribution to journalArticle

Open Access
Ultraviolet Rays
2 Citations (Scopus)

Ankyrin-B dysfunction predisposes to arrhythmogenic cardiomyopathy and is amenable to therapy

Roberts, J. D., Murphy, N. P., Hamilton, R. M., Lubbers, E. R., James, C. A., Kline, C. F., Gollob, M. H., Krahn, A. D., Sturm, A. C., Musa, H., El-Refaey, M., Koenig, S., Aneq, M. Å., Hoorntje, E. T., Graw, S. L., Davies, R. W., Rafiq, M. A., Koopmann, T. T., Aafaqi, S., Fatah, M. & 36 others, Chiasson, D. A., Taylor, M. R., Simmons, S. L., Han, M., van Opbergen, C. J., Wold, L. E., Sinagra, G., Mittal, K., Tichnell, C., Murray, B., Codima, A., Nazer, B., Nguyen, D. T., Marcus, F. I., Sobriera, N., Lodder, E. M., van den Berg, M. P., Spears, D. A., Robinson, J. F., Ursell, P. C., Green, A. K., Skanes, A. C., Tang, A. S., Gardner, M. J., Hegele, R. A., van Veen, T. A., Wilde, A. A. M., Healey, J. S., Janssen, P. M. L., Mestroni, L., van Tintelen, J. P., Calkins, H., Judge, D. P., Hund, T. J., Scheinman, M. M. & Mohler, P. J., Jul 2 2019, In : The Journal of clinical investigation. 130

Research output: Contribution to journalArticle

Open Access

Annot: A Django-based sample, reagent, and experiment metadata tracking system

Bucher, E., Claunch, C. J., Hee, D., Smith, R. L., Devlin, K., Thompson, W., Korkola, J. E. & Heiser, L. M., Nov 1 2019, In : BMC bioinformatics. 20, 1, 542.

Research output: Contribution to journalArticle

Open Access
Tracking System
Controlled Vocabulary
Laboratory Personnel
Network protocols
3 Citations (Scopus)

An observer blinded, randomized, placebo-controlled, phase I dose escalation trial to evaluate the safety and immunogenicity of an inactivated West Nile virus Vaccine, HydroVax-001, in healthy adults

Woods, C. W., Sanchez, A. M., Swamy, G. K., McClain, M. T., Harrington, L., Freeman, D., Poore, E. A., Slifka, D. K., Poer DeRaad, D. E., Amanna, I. J., Slifka, M., Cai, S., Shahamatdar, V., Wierzbicki, M. R., Amegashie, C. & Walter, E. B., Jan 1 2019, (Accepted/In press) In : Vaccine.

Research output: Contribution to journalArticle

West Nile Virus Vaccines
West Nile virus
Inactivated Vaccines
3 Citations (Scopus)

A non-circulating pool of factor XI associated with glycosaminoglycans in mice

Mohammed, B. M., Cheng, Q., Matafonov, A., Verhamme, I. M., Emsley, J., McCrae, K. R., McCarty, O., Gruber, A. & Gailani, D., Jan 1 2019, In : Journal of Thrombosis and Haemostasis.

Research output: Contribution to journalArticle

Factor XI
Blood Vessels
5 Citations (Scopus)

A Nonheme Thiolate-Ligated Cobalt Superoxo Complex: Synthesis and Spectroscopic Characterization, Computational Studies, and Hydrogen Atom Abstraction Reactivity

Gordon, J. B., Vilbert, A. C., Siegler, M. A., Lancaster, K. M., Moenne-Loccoz, P. & Goldberg, D. P., Feb 27 2019, In : Journal of the American Chemical Society. 141, 8, p. 3641-3653 13 p.

Research output: Contribution to journalArticle

X-Ray Absorption Spectroscopy

An online community of practice to improve intervention for individuals with complex communication needs

Quinn, E. D., Cook, A. & Rowland, C., Jan 1 2019, In : AAC: Augmentative and Alternative Communication.

Research output: Contribution to journalArticle

Information Dissemination
Communication Disorders
Professional Practice
3 Citations (Scopus)

An open label pilot study of a dexmedetomidine-remifentanil-caudal anesthetic for infant lower abdominal/lower extremity surgery: The T REX pilot study

Szmuk, P., Andropoulos, D., McGowan, F., Brambrink, A., Lee, C., Lee, K. J., McCann, M. E., Liu, Y., Saynhalath, R., Bong, C. L., Anderson, B. J., Berde, C., De Graaff, J. C., Disma, N., Kurth, D., Loepke, A., Orser, B., Sessler, D. I., Skowno, J. J., von Ungern-Sternberg, B. S. & 2 others, Vutskits, L. & Davidson, A., Jan 1 2019, In : Paediatric Anaesthesia. 29, 1, p. 59-67 9 p.

Research output: Contribution to journalArticle

Lower Extremity
Arterial Pressure

Another Step Toward Rational Application of Inferior Vena Cava Filters

Kaufman, J., Jun 24 2019, In : JACC: Cardiovascular Interventions. 12, 12, p. 1161-1163 3 p.

Research output: Contribution to journalEditorial

Vena Cava Filters
Bariatric Surgery
Pulmonary Embolism

A Novel Approach to Dysmorphology to Enhance the Phenotypic Classification of Autism Spectrum Disorder in the Study to Explore Early Development

Shapira, S. K., Tian, L. H., Aylsworth, A. S., Elias, E. R., Hoover-Fong, J. E., Meeks, N. J. L., Souders, M. C., Tsai, A., Zackai, E. H., Alexander, A. A., Yeargin-Allsopp, M. & Schieve, L. A., May 15 2019, In : Journal of autism and developmental disorders. 49, 5, p. 2184-2202 19 p.

Research output: Contribution to journalArticle

Population Control
Inborn Genetic Diseases
Autism Spectrum Disorder
Hispanic Americans
Ethnic Groups

A novel fluoroscopic-guided technique with micropuncture needle for the common femoral artery access

Leesar, M. A., Al Solaiman, F., Azarbal, A., Marmagkiolis, K. & Cilingiroglu, M., Jan 1 2019, (Accepted/In press) In : Cardiovascular Revascularization Medicine.

Research output: Contribution to journalArticle

Femoral Artery
Pubic Bone

A Novel Homozygous Mutation of the Acid-Labile Subunit (IGFALS) Gene in a Male Adolescent

Poyrazoğlu, Ş., Hwa, V., Baş, F., Dauber, A., Rosenfeld, R. & Darendeliler, F., Nov 22 2019, In : Journal of clinical research in pediatric endocrinology. 11, 4, p. 432-438 7 p.

Research output: Contribution to journalArticle

Open Access
Delayed Puberty
Insulin-Like Growth Factor Binding Protein 3
2 Citations (Scopus)

A novel neurotherapeutic for multiple sclerosis, ischemic injury, methamphetamine addiction, and traumatic brain injury

Vandenbark, A., Meza-Romero, R., Benedek, G. & Offner, H., Jan 23 2019, In : Journal of Neuroinflammation. 16, 1, 14.

Research output: Contribution to journalReview article

Multiple Sclerosis
Central Nervous System
Wounds and Injuries
Anti-Inflammatory Agents