Shannon McWeeney

Professor, PhD, Division Head

  • Mail Code: BICC, 3181 S.W. Sam Jackson Park Rd., Portland, OR 97239-3098

  • 5832 Citations
  • 40 h-Index
19952020
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Research Output 1997 2019

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Article
15 Citations (Scopus)

A comprehensive collection of systems biology data characterizing the host response to viral infection

Aevermann, B. D., Pickett, B. E., Kumar, S., Klem, E. B., Agnihothram, S., Askovich, P. S., Bankhead, A., Bolles, M., Carter, V., Chang, J., Clauss, T. R. W., Dash, P., Diercks, A. H., Eisfeld, A. J., Ellis, A., Fan, S., Ferris, M. T., Gralinski, L. E., Green, R. R., Gritsenko, M. A. & 48 others, Hatta, M., Heegel, R. A., Jacobs, J. M., Jeng, S., Josset, L., Kaiser, S. M., Kelly, S., Law, G. L., Li, C., Li, J., Long, C., Luna, M. L., Matzke, M., McDermott, J., Menachery, V., Metz, T. O., Mitchell, H., Monroe, M. E., Navarro, G., Neumann, G., Podyminogin, R. L., Purvine, S. O., Rosenberger, C. M., Sanders, C. J., Schepmoes, A. A., Shukla, A. K., Sims, A., Sova, P., Tam, V. C., Tchitchek, N., Thomas, P. G., Tilton, S. C., Totura, A., Wang, J., Webb-Robertson, B. J., Wen, J., Weiss, J. M., Yang, F., Yount, B., Zhang, Q., McWeeney, S., Smith, R. D., Waters, K. M., Kawaoka, Y., Baric, R., Aderem, A., Katze, M. G. & Scheuermann, R. H., Oct 14 2014, In : Scientific data. 1, 140033.

Research output: Contribution to journalArticle

Systems Biology
Pathogens
Virus Diseases
Viruses
Virus

Acute myeloid leukemia–induced T-cell suppression can be reversed by inhibition of the MAPK pathway

Moshofsky, K. B., Cho, H. J., Wu, G., Romine, K. A., Newman, M. T., Kosaka, Y., McWeeney, S. K. & Lind, E. F., Oct 22 2019, In : Blood Advances. 3, 20, p. 3038-3051 14 p.

Research output: Contribution to journalArticle

Open Access
T-Lymphocytes
Acute Myeloid Leukemia
Mitogen-Activated Protein Kinase Kinases
Programmed Cell Death 1 Ligand 2 Protein
Cell Death
13 Citations (Scopus)

A DNA methylation microarray-based study identifies ERG as a gene commonly methylated in prostate cancer

Schwartzman, J., Mongoue-Tchokote, S., Gibbs, A., Gao, L., Corless, C., Jin, J., Zarour, L., Higano, C., True, L. D., Vessella, R. L., Wilmot, B., Bottomly, D., McWeeney, S., Bova, S. G., Partin, A. W., Mori, M. T. & Alumkal, J., Oct 2011, In : Epigenetics. 6, 10, p. 1248-1256 9 p.

Research output: Contribution to journalArticle

DNA Methylation
Oligonucleotide Array Sequence Analysis
Prostatic Neoplasms
Genes
Prostate
85 Citations (Scopus)

A gene expression signature of CD34+ cells to predict major cytogenetic response in chronic-phase chronic myeloid leukemia patients treated with imatinib

McWeeney, S., Pemberton, L. C., Loriaux, M., Vartanian, K., Willis, S. G., Yochum, G., Wilmot, B., Turpaz, Y., Pillai, R., Druker, B., Snead, J. L., MacPartlin, M., O'Brien, S. G., Melo, J. V., Lange, T., Harrington, C. C. & Deininger, M. W. N., Jan 14 2010, In : Blood. 115, 2, p. 315-325 11 p.

Research output: Contribution to journalArticle

Leukemia, Myeloid, Chronic Phase
Transcriptome
Gene expression
Cytogenetics
Classifiers
2 Citations (Scopus)

Alignment of the transcriptome with individual variation in animals selectively bred for High Drinking-In-the-Dark (HDID)

Hitzemann, R., Oberbeck, D., Iancu, O., Darakjian, P., McWeeney, S., Spence, S., Schlumbohm, J., Metten, P. & Crabbe, J. J., May 1 2017, In : Alcohol. 60

Research output: Contribution to journalArticle

Transcriptome
Drinking
Animals
Ethanol
animal
67 Citations (Scopus)

A loss-of-function nonsynonymous polymorphism in the osmoregulatory TRPV4 gene is associated with human hyponatremia

Tian, W., Fu, Y., Garcia-Elias, A., Fernández-Fernández, J. M., Vicente, R., Kramer, P. L., Klein, R., Hitzemann, R., Orwoll, E., Wilmot, B., McWeeney, S., Valverde, M. A. & Cohen, D., Aug 18 2009, In : Proceedings of the National Academy of Sciences of the United States of America. 106, 33, p. 14034-14039 6 p.

Research output: Contribution to journalArticle

TRPV Cation Channels
Hyponatremia
Sodium
Alleles
Osmotic Pressure
36 Citations (Scopus)

A microRNA screen identifies the Wnt signaling pathway as a regulator of the interferon response during flavivirus infection

Smith, J. L., Jeng, S., McWeeney, S. & Hirsch, A., Apr 1 2017, In : Journal of Virology. 91, 8, e02388-16.

Research output: Contribution to journalArticle

Flavivirus Infections
Flavivirus
Wnt Signaling Pathway
interferons
MicroRNAs
21 Citations (Scopus)

A Mouse Model of Chronic West Nile Virus Disease

Graham, J. B., Swarts, J. L., Wilkins, C., Thomas, S., Green, R., Sekine, A., Voss, K. M., Ireton, R. C., Mooney, M., Choonoo, G., Miller, D. R., Treuting, P. M., Pardo Manuel de Villena, F., Ferris, M. T., McWeeney, S., Gale, M. & Lund, J. M., Nov 1 2016, In : PLoS Pathogens. 12, 11, e1005996.

Research output: Contribution to journalArticle

West Nile virus
Virus Diseases
Infection
Inbred Strains Mice
Regulatory T-Lymphocytes
45 Citations (Scopus)

An antisense transcript induced by Wnt/β-catenin signaling decreases E2F4

Yochum, G. S., Cleland, R., McWeeney, S. & Goodman, R., Jan 12 2007, In : Journal of Biological Chemistry. 282, 2, p. 871-878 8 p.

Research output: Contribution to journalArticle

Catenins
Genes
3' Untranslated Regions
Binding Sites
Cells
66 Citations (Scopus)

Androgen Receptor Promotes Ligand-Independent Prostate Cancer Progression through c-Myc Upregulation

Gao, L., Schwartzman, J., Gibbs, A., Lisac, R., Kleinschmidt, R., Wilmot, B., Bottomly, D., Coleman, I., Nelson, P., McWeeney, S. & Alumkal, J., May 21 2013, In : PLoS One. 8, 5, e63563.

Research output: Contribution to journalArticle

Androgen Receptors
prostatic neoplasms
Prostatic Neoplasms
Up-Regulation
Ligands
8 Citations (Scopus)

A simulation framework to investigate in vitro viral infection dynamics

Bankhead, A., Mancini, E., Sims, A. C., Baric, R. S., McWeeney, S. & Sloot, P. M. A., 2013, In : Journal of Computational Science. 4, 3, p. 127-134 8 p.

Research output: Contribution to journalArticle

Simulation Framework
Viruses
Infection
Virus
Severe Acute Respiratory Syndrome
2 Citations (Scopus)

A single-cell approach to the elusive latent human cytomegalovirus transcriptome

Goodrum, F. & McWeeney, S., May 1 2018, In : mBio. 9, 3, e01001-18.

Research output: Contribution to journalArticle

RNA Sequence Analysis
Cytomegalovirus
Transcriptome
Single-Cell Analysis
Gene Expression
15 Citations (Scopus)

A systems framework for vaccine design.

Mooney, M., McWeeney, S., Canderan, G. & Sékaly, R. P., Oct 2013, In : Current Opinion in Immunology. 25, 5, p. 551-555 5 p.

Research output: Contribution to journalArticle

Vaccines
Host-Pathogen Interactions
Precision Medicine
Systems Biology
Immunity
142 Citations (Scopus)

A viral microRNA down-regulates multiple cell cycle genes through mRNA 59′UTRs

Grey, F., Tirabassi, R., Meyers, H., Wu, G., McWeeney, S., Hook, L. & Nelson, J., Jun 2010, In : PLoS Pathogens. 6, 6

Research output: Contribution to journalArticle

cdc Genes
MicroRNAs
Down-Regulation
Messenger RNA
Cyclins
15 Citations (Scopus)

BCR-ABL1 promotes leukemia by converting p27 into a cytoplasmic oncoprotein

Agarwal, A., Mackenzie, R. J., Besson, A., Jeng, S., Carey, A., LaTocha, D. H., Fleischman, A. G., Duquesnes, N., Eide, C. A., Vasudevan, K. B., Loriaux, M., Firpo, E., Cortes, J. E., McWeeney, S., O'Hare, T., Roberts, J. M., Druker, B. & Deininger, M. W., Nov 20 2014, In : Blood. 124, 22, p. 3260-3273 14 p.

Research output: Contribution to journalArticle

Oncogene Proteins
Leukemia, Myelogenous, Chronic, BCR-ABL Positive
Tumors
Leukemia
Cyclin-Dependent Kinases

Between pathways and networks lies context: Implications for precision medicine

Laderas, T., Wu, G. & McWeeney, S., Sep 1 2015, In : Science Progress. 98, 3, p. 253-263 11 p.

Research output: Contribution to journalArticle

Precision Medicine
Genes
Life Style
Neoplasms
Therapeutics
118 Citations (Scopus)

Cancer stem cell tumor model reveals invasive morphology and increased phenotypical heterogeneity

Sottoriva, A., Verhoeff, J. J. C., Borovski, T., McWeeney, S., Naumov, L., Medema, J. P., Sloot, P. M. A. & Vermeulen, L., Jan 1 2010, In : Cancer Research. 70, 1, p. 46-56 11 p.

Research output: Contribution to journalArticle

Neoplastic Stem Cells
Neoplasms
Population
Theoretical Models
3 Citations (Scopus)

Challenges in secondary analysis of high throughput screening data.

Blucher, A. S. & McWeeney, S., 2014, In : Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. p. 114-124 11 p.

Research output: Contribution to journalArticle

Drug Repositioning
Practice Guidelines
Biological Assay
Databases
Costs and Cost Analysis
76 Citations (Scopus)

Characterization of pancreatic transcription factor Pdx-1 binding sites using promoter microarray and serial analysis of chromatin occupancy

Keller, D. M., McWeeney, S., Arsenlis, A., Drouin, J., Wright, C. V. E., Wang, H., Wollheim, C. B., White, P., Kaestner, K. H. & Goodman, R., Nov 2 2007, In : Journal of Biological Chemistry. 282, 44, p. 32084-32092 9 p.

Research output: Contribution to journalArticle

Microarray Analysis
Microarrays
Chromatin
Transcription Factors
Genes
9 Citations (Scopus)

Characterization of the leukemogenic potential of distal cytoplasmic CSF3R truncation and missense mutations

Zhang, H., Reister Schultz, A., Luty, S., Rofelty, A., Su, Y., Means, S., Bottomly, D., Wilmot, B., McWeeney, S. & Tyner, J., Dec 1 2017, In : Leukemia. 31, 12, p. 2752-2760 9 p.

Research output: Contribution to journalArticle

Missense Mutation
Mutation
High-Throughput Nucleotide Sequencing
Ubiquitination
Leukemia
8 Citations (Scopus)

Characterization of the quantitative trait locus for haloperidol-induced catalepsy on distal mouse chromosome 1

Hofstetter, J. R., Hitzemann, R., Belknap, J., Walter, N. A. R., McWeeney, S. & Mayeda, A. R., Mar 2008, In : Genes, Brain and Behavior. 7, 2, p. 214-223 10 p.

Research output: Contribution to journalArticle

Catalepsy
Chromosomes, Human, Pair 1
Quantitative Trait Loci
Haloperidol
Single Nucleotide Polymorphism
12 Citations (Scopus)

Clinical resistance to crenolanib in acute myeloid leukemia due to diverse molecular mechanisms

Zhang, H., Savage, S., Schultz, A. R., Bottomly, D., White, L., Segerdell, E., Wilmot, B., McWeeney, S., Eide, C. A., Nechiporuk, T., Carlos, A., Henson, R., Lin, C., Searles, R., Ho, H., Lam, Y. L., Sweat, R., Follit, C., Jain, V., Lind, E. & 10 others, Borthakur, G., Garcia-Manero, G., Ravandi, F., Kantarjian, H. M., Cortes, J., Collins, R., Buelow, D. R., Baker, S. D., Druker, B. & Tyner, J., Dec 1 2019, In : Nature Communications. 10, 1, 244.

Research output: Contribution to journalArticle

leukemias
mutations
Acute Myeloid Leukemia
Mutation
inhibitors
14 Citations (Scopus)

Codon usage bias and base composition in MHC genes in humans and common chimpanzees

McWeeney, S. & Valdes, A. M., 1999, In : Immunogenetics. 49, 4, p. 272-279 8 p.

Research output: Contribution to journalArticle

Pan troglodytes
Base Composition
Major Histocompatibility Complex
Codon
Genes
10 Citations (Scopus)

Combined targeting of SET and tyrosine kinases provides an effective therapeutic approach in human T-cell acute lymphoblastic leukemia

Richard, N. P., Pippa, R., Cleary, M. M., Puri, A., Tibbitts, D., Mahmood, S., Christensen, D. J., Jeng, S., McWeeney, S., Look, A. T., Chang, B., Tyner, J., Vitek, M. P., Odero, M. D., Sears, R. & Agarwal, A., 2016, In : Oncotarget. 7, 51, p. 84214-84227 14 p.

Research output: Contribution to journalArticle

Precursor T-Cell Lymphoblastic Leukemia-Lymphoma
Protein-Tyrosine Kinases
Protein Phosphatase 2
Cell Line
Phosphotransferases
9 Citations (Scopus)
Microbiota
Biomass
Urinary Tract
Vagina
Urinary Tract Infections
4 Citations (Scopus)
Precision Medicine
Genes
Precursor Cell Lymphoblastic Leukemia-Lymphoma
Small Interfering RNA
Genome
12 Citations (Scopus)

Complex genetics of interactions of alcohol and CNS function and behavior

Matthews, D. B., Bhave, S. V., Belknap, J., Brittingham, C., Chesler, E. J., Hitzemann, R., Hoffmann, P. L., Lu, L., McWeeney, S., Miles, M. F., Tabakoff, B. & Williams, R. W., Sep 2005, In : Alcoholism: Clinical and Experimental Research. 29, 9, p. 1706-1719 14 p.

Research output: Contribution to journalArticle

vpr Genes
Genetically Modified Animals
Microarray Analysis
Marriage
Alcoholism
13 Citations (Scopus)

Comprehensive definition of human immunodominant CD8 antigens in tuberculosis

Lewinsohn, D., Swarbrick, G. M., Park, B., Cansler, M. E., Null, M. D., Toren, K. G., Baseke, J., Zalwango, S., Mayanja-Kizza, H., Malone, L. L., Nyendak, M., Wu, G., Guinn, K., McWeeney, S., Mori, M. T., Chervenak, K. A., Sherman, D. R., Boom, W. H. & Lewinsohn, D., Dec 1 2017, In : npj Vaccines. 2, 1, 8.

Research output: Contribution to journalArticle

CD8 Antigens
Immunodominant Epitopes
Mycobacterium tuberculosis
Tuberculosis
Tuberculosis Vaccines
8 Citations (Scopus)

Computational detection of alternative exon usage

Laderas, T. G., Walter, N. A. R., Mooney, M., Vartanian, K., Darakjian, P., Buck, K., Harrington, C. C., Belknap, J., Hitzemann, R. & McWeeney, S., 2011, In : Frontiers in Neuroscience. MAY, Article 69.

Research output: Contribution to journalArticle

Exons
Statistical Models
Molecular Sequence Annotation
Workflow
Genetic Models
7 Citations (Scopus)

Consensus framework for exploring microarray data using multiple clustering methods

Laderas, T. & McWeeney, S., 2007, In : OMICS A Journal of Integrative Biology. 11, 1, p. 116-128 13 p.

Research output: Contribution to journalArticle

Microarrays
Clustering algorithms
Cluster Analysis
Genes
Software packages
27 Citations (Scopus)

Conserved host response to highly pathogenic avian influenza virus infection in human cell culture, mouse and macaque model systems

McDermott, J. E., Shankaran, H., Eisfeld, A. J., Belisle, S. E., Neuman, G., Li, C., McWeeney, S., Sabourin, C., Kawaoka, Y., Katze, M. G. & Waters, K. M., Nov 11 2011, In : BMC Systems Biology. 5, 190.

Research output: Contribution to journalArticle

Cell Culture
Influenza in Birds
Influenza
Macaca
Virus Diseases
9 Citations (Scopus)

Controlling for contaminants in low-biomass 16S rRNA gene sequencing experiments

Karstens, L., Asquith, M., Davin, S., Fair, D., Gregory, W. T., Wolfe, A. J., Braun, J. & McWeeney, S., Jul 1 2019, In : mSystems. 4, 4, e00290-19.

Research output: Contribution to journalArticle

Open Access
Biomass
rRNA Genes
Sequencing
microbial communities
Genes
17 Citations (Scopus)

Copy number variation analysis in 98 individuals with PHACE syndrome

Siegel, D. H., Shieh, J. T. C., Kwon, E. K., Baselga, E., Blei, F., Cordisco, M., Dobyns, W. B., Duffy, K. J., Garzon, M. C., Gibbs, D. L., Grimmer, J. F., Hayflick, S., Krol, A., Kwok, P. Y., Lorier, R., Matter, A., McWeeney, S., Metry, D., Mitchell, S., Pope, E. & 8 others, Santoro, J. L., Stevenson, D. A., Bayrak-Toydemir, P., Wilmot, B., Worthey, E. A., Frieden, I. J., Drolet, B. A. & Broeckel, U., Mar 2013, In : Journal of Investigative Dermatology. 133, 3, p. 677-684 8 p.

Research output: Contribution to journalArticle

Genes
Defects
Aortic Coarctation
Centromere
Hemangioma
15 Citations (Scopus)

Corepressor Rcor1 is essential for murine erythropoiesis

Yao, H., Goldman, D., Nechiporuk, T., Kawane, S., McWeeney, S., Tyner, J., Fan, G., Kerenyi, M. A., Orkin, S. H., Fleming, W. & Mandel, G., May 15 2014, In : Blood. 123, 20, p. 3175-3184 10 p.

Research output: Contribution to journalArticle

Co-Repressor Proteins
Erythropoiesis
Genes
Erythroblasts
Colony-Stimulating Factor Receptors
21 Citations (Scopus)

Cosplicing network analysis of mammalian brain RNA-Seq data utilizing WGCNA and Mantel correlations

Iancu, O., Colville, A., Oberbeck, D., Darakjian, P., McWeeney, S. & Hitzemann, R., 2015, In : Frontiers in Genetics. 6, MAY, 174.

Research output: Contribution to journalArticle

RNA
Exons
Binding Sites
Brain
Genes
6 Citations (Scopus)

CSF1R inhibitors exhibit antitumor activity in acute myeloid leukemia by blocking paracrine signals from support cells

Edwards, D. K., Watanabe-Smith, K., Rofelty, A., Damnernsawad, A., Laderas, T., Lamble, A., Lind, E., Kaempf, A., Mori, M. T., Rosenberg, M., d’Almeida, A., Long, N., Agarwal, A., Sweeney, D. T., Loriaux, M., McWeeney, S. & Tyner, J., Feb 7 2019, In : Blood. 133, 6, p. 588-599 12 p.

Research output: Contribution to journalArticle

Hepatocyte Growth Factor
Acute Myeloid Leukemia
Macrophage Colony-Stimulating Factor
Cytokines
Cells
60 Citations (Scopus)

Cytomegalovirus miRNAs target secretory pathway genes to facilitate formation of the virion assembly compartment and reduce cytokine secretion

Hook, L. M., Grey, F., Grabski, R., Tirabassi, R., Doyle, T., Hancock, M., Landais, I., Jeng, S., McWeeney, S., Britt, W. & Nelson, J., Mar 12 2014, In : Cell Host and Microbe. 15, 3, p. 363-373 11 p.

Research output: Contribution to journalArticle

Secretory Pathway
Cytomegalovirus
MicroRNAs
Virion
Cytokines
1 Citation (Scopus)

Data integration and reproducibility for high-throughput transcriptomics

Mooney, M. & McWeeney, S., 2014, In : International Review of Neurobiology. 116, p. 55-71 17 p.

Research output: Contribution to journalArticle

Transcriptome
Practice Guidelines
Computer Simulation
Research Personnel
Guidelines
570 Citations (Scopus)

Defining the CREB regulon: A genome-wide analysis of transcription factor regulatory regions

Impey, S., McCorkle, S. R., Cha-Molstad, H., Dwyer, J. M., Yochum, G. S., Boss, J. M., McWeeney, S., Dunn, J. J., Mandel, G. & Goodman, R., Dec 29 2004, In : Cell. 119, 7, p. 1041-1054 14 p.

Research output: Contribution to journalArticle

Regulon
Nucleic Acid Regulatory Sequences
Chromatin
Transcription Factors
Genes
34 Citations (Scopus)

Deoxyribonucleic acid microarray analysis of gene expression pattern in the arcuate nucleus/ventromedial nucleus of hypothalamus during lactation

Xiao, Q. X., Grove, K., See, Y. L., McWeeney, S. & Smith, M. S., Oct 2005, In : Endocrinology. 146, 10, p. 4391-4398 8 p.

Research output: Contribution to journalArticle

Arcuate Nucleus of Hypothalamus
Microarray Analysis
Lactation
Hypothalamus
Gene Expression
5 Citations (Scopus)
Quantitative Trait Loci
Chromosomes
Population
Genome
Gene Expression
25 Citations (Scopus)

Detection of reciprocal quantitative trait loci for acute ethanol withdrawal and ethanol consumption in heterogeneous stock mice

Hitzemann, R., Edmunds, S., Wu, W., Malmanger, B., Walter, N., Belknap, J., Darakjian, P. & McWeeney, S., May 2009, In : Psychopharmacology. 203, 4, p. 713-722 10 p.

Research output: Contribution to journalArticle

Quantitative Trait Loci
Ethanol
Chromosomes, Human, Pair 1
Haplotypes
Genes
15 Citations (Scopus)

Differential Network Analysis Reveals Genetic Effects on Catalepsy Modules

Iancu, O., Oberbeck, D., Darakjian, P., Kawane, S., Erk, J., McWeeney, S. & Hitzemann, R., Mar 21 2013, In : PLoS One. 8, 3, e58951.

Research output: Contribution to journalArticle

Catalepsy
Haloperidol
Electric network analysis
haloperidol
genetic techniques and protocols
39 Citations (Scopus)

Distribution of menin-occupied regions in chromatin specifies a broad role of menin in transcriptional regulation

Agarwal, S. K., Impey, S., McWeeney, S., Scacheri, P. C., Collins, F. S., Goodman, R., Spiegel, A. M. & Marx, S. J., Feb 2007, In : Neoplasia. 9, 2, p. 101-107 7 p.

Research output: Contribution to journalArticle

Chromatin
Multiple Endocrine Neoplasia Type 1
Genes
Genome
Chromatin Immunoprecipitation
17 Citations (Scopus)

Diversity outbred mice at 21: Maintaining allelic variation in the face of selection

Chesler, E. J., Gatti, D. M., Morgan, A. P., Strobel, M., Trepanier, L., Oberbeck, D., McWeeney, S., Hitzemann, R., Ferris, M., McMullan, R., Clayshultle, A., Bell, T. A., de Villena, F. P. M. & Churchill, G. A., 2016, In : G3: Genes, Genomes, Genetics. 6, 12, p. 3893-3902 10 p.

Research output: Contribution to journalArticle

Alleles
Gene Frequency
Chromosomes, Human, Pair 2
Population
Genome
13 Citations (Scopus)

DNA microarray and proteomic strategies for understanding alcohol action

Sikela, J. M., MacLaren, E. J., Kim, Y., Karimpour-Fard, A., Cai, W. W., Pollack, J., Hitzemann, R., Belknap, J., McWeeney, S., Kerns, R. T., Downing, C., Johnson, T. E., Grant, K. J., Tabakoff, B., Hoffman, P., Wu, C. C. & Miles, M. F., Apr 2006, In : Alcoholism: Clinical and Experimental Research. 30, 4, p. 700-708 9 p.

Research output: Contribution to journalArticle

Microarrays
Oligonucleotide Array Sequence Analysis
Proteomics
Sleep
Genes
66 Citations (Scopus)

Does the urinary microbiome play a role in urgency urinary incontinence and its severity?

Karstens, L., Asquith, M., Davin, S., Stauffer, P., Fair, D., Gregory, W. T., Rowsenbaum, J. T., McWeeney, S. & Nardos, R., Jul 27 2016, In : Frontiers in cellular and infection microbiology. 6, JUL, 78.

Research output: Contribution to journalArticle

Microbiota
Urinary Incontinence
Bacteria
Urinary Tract
Urinary Bladder
17 Citations (Scopus)

Dual-Trait Selection for Ethanol Consumption and Withdrawal: Genetic and Transcriptional Network Effects

Metten, P., Iancu, O., Spence, S. E., Walter, N. A. R., Oberbeck, D., Harrington, C. C., Colville, A., McWeeney, S., Phillips, T., Buck, K., Crabbe, J. J., Belknap, J. & Hitzemann, R., Dec 1 2014, In : Alcoholism: Clinical and Experimental Research. 38, 12, p. 2915-2924 10 p.

Research output: Contribution to journalArticle

Gene Regulatory Networks
Quantitative Trait Loci
Chromosomes
Ethanol
Genes
12 Citations (Scopus)

Effects of selection for ethanol preference on gene expression in the nucleus accumbens of HS-CC mice

Colville, A. M., Iancu, O., Oberbeck, D. L., Darakjian, P., Zheng, C., Walter, N. A. R., Harrington, C. C., Searles, R., McWeeney, S. & Hitzemann, R., 2017, (Accepted/In press) In : Genes, Brain and Behavior.

Research output: Contribution to journalArticle

Nucleus Accumbens
Ethanol
Gene Expression
Gene Regulatory Networks
Long Noncoding RNA
Gene expression
Alcohols