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  • 8 Similar Profiles
Neoplasms Medicine & Life Sciences
Breast Neoplasms Medicine & Life Sciences
Genome Medicine & Life Sciences
Genes Medicine & Life Sciences
Glioblastoma Medicine & Life Sciences
Tumors Chemical Compounds
Oligonucleotide Array Sequence Analysis Medicine & Life Sciences
Mutation Medicine & Life Sciences

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Projects 1992 2021

OHSU Center for Specialized Data Analysis as part of the GDAN

Spellman, P.

National Institutes of Health


Project: Research projectResource-Related Research Projects--Cooperative Agreements

Computational Biology

Integrative approach to heterogeneity in breast cancer metastasis

Spellman, P.

National Institutes of Health


Project: Research projectResearch Project--Cooperative Agreements

Breast Neoplasms
Neoplasm Metastasis
Estrogen Receptors

Intratumor heterogeneity underlying treatment resistance in HER2+ breast tumors

Spellman, P., Gray, J., Polyak, K. & Michor, F.

National Institutes of Health


Project: Research projectResearch Project--Cooperative Agreements

Breast Neoplasms
Clone Cells

TCGA Data Analysis Center at Berkeley

Spellman, P. & Speed, T. P.

National Institutes of Health


Project: Research projectResource-Related Research Projects--Cooperative Agreements

Genetic Loci

Systems-Based Predictions of Responses to Cancer Therapy

Spellman, P., Gray, J., Yaswen, P., Stampfer, M., Parvin, B. A., Barcellos-Hoff, M. H., Mills, G. B., Tomlin, C., Korn, W. M. & Mills, G.

National Institutes of Health


Project: Research projectSpecialized Center--Cooperative Agreements

Mitogen-Activated Protein Kinase Kinases
Breast Neoplasms
Cell Line
Signal Transduction

Research Output 1998 2018

MHC class I loaded ligands from breast cancer cell lines: A potential HLA-I-typed antigen collection

Rozanov, D. V. , Rozanov, N. D. , Chiotti, K. E. , Reddy, A. , Wilmarth, P. A. , David, L. L. , Cha, S. W. , Woo, S. , Pevzner, P. , Bafna, V. , Burrows, G. G. , Rantala, J. K. , Levin, T. , Anur, P. , Johnson-Camacho, K. , Tabatabaei, S. , Munson, D. J. , Bruno, T. C. , Slansky, J. E. , Kappler, J. W. & 9 others Hirano, N., Boegel, S., Fox, B. A., Egelston, C., Simons, D. L., Jimenez, G., Lee, P. P., Gray, J. W. & Spellman, P. T. Mar 30 2018 In : Journal of Proteomics. 176, p. 13-23 11 p.

Research output: Contribution to journalArticle

Breast Neoplasms
Cell Line
3 Citations

Circulating-tumor DNA as an early detection and diagnostic tool

Butler, T. M., Spellman, P. T. & Gray, J. Feb 1 2017 In : Current Opinion in Genetics and Development. 42, p. 14-21 8 p.

Research output: Contribution to journalReview article

Patient Care
2 Citations

Comprehensive and Integrated Genomic Characterization of Adult Soft Tissue Sarcomas

Abeshouse, A. , Adebamowo, C. , Adebamowo, S. N. , Akbani, R. , Akeredolu, T. , Ally, A. , Anderson, M. L. , Anur, P. , Appelbaum, E. L. , Armenia, J. , Auman, J. T. , Bailey, M. H. , Baker, L. , Balasundaram, M. , Balu, S. , Barthel, F. P. , Bartlett, J. , Baylin, S. B. , Behera, M. , Belyaev, D. & 31 others Bennett, J., Benz, C., Beroukhim, R., Birrer, M., Bocklage, T., Bodenheimer, T., Boice, L., Bootwalla, M. S., Bowen, J., Bowlby, R., Boyd, J., Brohl, A. S., Brooks, D., Byers, L., Carlsen, R., Castro, P., Chen, H. W., Cherniack, A. D., Chibon, F., Chin, L., Cho, J., Chuah, E., Chudamani, S., Cibulskis, C., Cooper, L. A. D., Cope, L., Cordes, M. G., Davis, L. E., Mills, G. B., Spellman, P. & The Cancer Genome Atlas Research Network Nov 2 2017 In : Cell. 171, 4, p. 950-965.e28

Research output: Contribution to journalArticle

1 Citations

Context Specificity in Causal Signaling Networks Revealed by Phosphoprotein Profiling

Hill, S. M., Nesser, N. K., Johnson-Camacho, K., Jeffress, M., Johnson, A., Boniface, C., Spencer, S. E. F., Lu, Y., Heiser, L. M., Lawrence, Y., Pande, N. T., Korkola, J. E., Gray, J. W., Mills, G. B., Mukherjee, S. & Spellman, P. T. Jan 25 2017 In : Cell Systems. 4, 1, p. 73-83.e10

Research output: Contribution to journalArticle

Protein Array Analysis
Receptor Protein-Tyrosine Kinases

Correction: Decoupling of the PI3K pathway via mutation necessitates combinatorial treatment in HER2+ breast cancer (PLoS ONE (2015) 10:7 (e0133219) DOI: 10.1371/journal.pone.0133219)

Korkola, J. E. , Collisson, E. A. , Heiser, L. M. , Oates, C. , Bayani, N. , Itani, S. , Esch, A. , Thompson, W. , Griffith, O. L. , Wang, N. J. , Kuo, W. L. , Cooper, B. , Billig, J. , Ziyad, S. , Hung, J. L. , Jakkula, L. , Feiler, H. , Lu, Y. , Mills, G. B. , Spellman, P. T. & 3 others Tomlin, C., Mukherjee, S. & Gray, J. W. Oct 1 2017 In : PLoS ONE. 12, 10, e0186551

Research output: Contribution to journalComment/debate

phosphatidylinositol 3-kinase
Phosphatidylinositol 3-Kinases
breast neoplasms
Breast Neoplasms