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  • 11 Similar Profiles
Neoplasms Medicine & Life Sciences
Genes Medicine & Life Sciences
Breast Neoplasms Medicine & Life Sciences
Genome Medicine & Life Sciences
Mutation Medicine & Life Sciences
Cell Line Medicine & Life Sciences
Tumors Chemical Compounds
Therapeutics Medicine & Life Sciences

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Projects 1992 2021

OHSU Center for Specialized Data Analysis as part of the GDAN

Spellman, P.

National Institutes of Health

9/13/168/31/21

Project: Research projectResource-Related Research Projects--Cooperative Agreements

Neoplasms
Atlases
Genome
Therapeutics
Computational Biology

Integrative approach to heterogeneity in breast cancer metastasis

Spellman, P.

National Institutes of Health

6/1/165/31/21

Project: Research projectResearch Project--Cooperative Agreements

Breast Neoplasms
Neoplasm Metastasis
Neoplasms
Therapeutics
Heterografts

Intratumor heterogeneity underlying treatment resistance in HER2+ breast tumors

Spellman, P., Gray, J., Polyak, K. & Michor, F.

National Institutes of Health

6/1/155/31/20

Project: Research projectResearch Project--Cooperative Agreements

Breast Neoplasms
Neoplasms
Therapeutics
Mutation
Clone Cells

TCGA Data Analysis Center at Berkeley

Spellman, P. & Speed, T. P.

National Institutes of Health

9/28/097/31/16

Project: Research projectResource-Related Research Projects--Cooperative Agreements

Atlases
Genome
Neoplasms
Genetic Loci
MicroRNAs

Systems-Based Predictions of Responses to Cancer Therapy

Spellman, P., Gray, J., Yaswen, P., Stampfer, M., Parvin, B. A., Barcellos-Hoff, M. H., Mills, G. B., Tomlin, C. & Korn, W. M.

National Institutes of Health

9/30/042/29/16

Project: Research projectSpecialized Center--Cooperative Agreements

Therapeutics
Breast Neoplasms
Neoplasms
Mitogen-Activated Protein Kinase Kinases
Cell Line

Research Output 1998 2017

2 Citations

Circulating-tumor DNA as an early detection and diagnostic tool

Butler, T. M., Spellman, P. T. & Gray, J. Feb 1 2017 In : Current Opinion in Genetics and Development. 42, p. 14-21 8 p.

Research output: Research - peer-reviewReview article

DNA
Neoplasms
Explosions
Patient Care
Biopsy

Comprehensive and Integrated Genomic Characterization of Adult Soft Tissue Sarcomas

Abeshouse, A. , Adebamowo, C. , Adebamowo, S. N. , Akbani, R. , Akeredolu, T. , Ally, A. , Anderson, M. L. , Anur, P. , Appelbaum, E. L. , Armenia, J. , Auman, J. T. , Bailey, M. H. , Baker, L. , Balasundaram, M. , Balu, S. , Barthel, F. P. , Bartlett, J. , Baylin, S. B. , Behera, M. , Belyaev, D. & 245 others Bennett, J., Benz, C., Beroukhim, R., Birrer, M., Bocklage, T., Bodenheimer, T., Boice, L., Bootwalla, M. S., Bowen, J., Bowlby, R., Boyd, J., Brohl, A. S., Brooks, D., Byers, L., Carlsen, R., Castro, P., Chen, H. W., Cherniack, A. D., Chibon, F., Chin, L., Cho, J., Chuah, E., Chudamani, S., Cibulskis, C., Cooper, L. A. D., Cope, L., Cordes, M. G., Crain, D., Curley, E., Danilova, L., Dao, F., Davis, I. J., Davis, L. E., Defreitas, T., Delman, K., Demchok, J. A., Demetri, G. D., Demicco, E. G., Dhalla, N., Diao, L., Ding, L., DiSaia, P., Dottino, P., Doyle, L. A., Drill, E., Dubina, M., Eschbacher, J., Fedosenko, K., Felau, I., Ferguson, M. L., Frazer, S., Fronick, C. C., Fulidou, V., Fulton, L. A., Fulton, R. S., Gabriel, S. B., Gao, J., Gao, Q., Gardner, J., Gastier-Foster, J. M., Gay, C. M., Gehlenborg, N., Gerken, M., Getz, G., Godwin, A. K., Godwin, E. M., Gordienko, E., Grilley-Olson, J. E., Gutman, D. A., Gutmann, D. H., Hayes, D. N., Hegde, A. M., Heiman, D. I., Heins, Z., Helsel, C., Hepperla, A. J., Higgins, K., Hoadley, K. A., Hobensack, S., Holt, R. A., Hoon, D. B., Hornick, J. L., Hoyle, A. P., Hu, X., Huang, M., Hutter, C. M., Iacocca, M., Ingram, D. R., Ittmann, M., Iype, L., Jefferys, S. R., Jones, K. B., Jones, C. D., Jones, S. J. M., Kalir, T., Karlan, B. Y., Karseladze, A., Kasaian, K., Kim, J., Kundra, R., Kuo, H., Ladanyi, M., Lai, P. H., Laird, P. W., Larsson, E., Lawrence, M. S., Lazar, A. J., Lee, S., Lee, D., Lehmann, K. V., Leraas, K. M., Lester, J., Levine, D. A., Li, I., Lichtenberg, T. M., Lin, P., Liu, J., Liu, W., Liu, E. M., Lolla, L., Lu, Y., Ma, Y., Madan, R., Maglinte, D. T., Magliocco, A., Maki, R. G., Mallery, D., Manikhas, G., Mardis, E. R., Mariamidze, A., Marra, M. A., Martignetti, J. A., Martinez, C., Mayo, M., McLellan, M. D., Meier, S., Meng, S., Meyerson, M., Mieczkowski, P. A., Miller, C. A., Mills, G. B., Moore, R. A., Morris, S., Mose, L. E., Mozgovoy, E., Mungall, A. J., Mungall, K., Nalisnik, M., Naresh, R., Newton, Y., Noble, M. S., Novak, J. E., Ochoa, A., Olvera, N., Owonikoko, T. K., Paklina, O., Parfitt, J., Parker, J. S., Pastore, A., Paulauskis, J., Penny, R., Pereira, E., Perou, C. M., Perou, A. H., Pihl, T., Pollock, R. E., Potapova, O., Radenbaugh, A. J., Ramalingam, S. S., Ramirez, N. C., Rathmell, W. K., Raut, C. P., Riedel, R. F., Reilly, C., Reynolds, S. M., Roach, J., Robertson, A. G., Roszik, J., Rubin, B. P., Sadeghi, S., Saksena, G., Salner, A., Sanchez-Vega, F., Sander, C., Schein, J. E., Schmidt, H. K., Schultz, N., Schumacher, S. E., Sekhon, H., Senbabaoglu, Y., Setdikova, G., Shelton, C., Shelton, T., Shen, R., Shi, Y., Shih, J., Shmulevich, I., Sica, G. L., Simons, J. V., Singer, S., Sipahimalani, P., Skelly, T., Socci, N., Sofia, H. J., Soloway, M. G., Spellman, P., Sun, Q., Swanson, P., Tam, A., Tan, D., Tarnuzzer, R., Thiessen, N., Thompson, E., Thorne, L. B., Tong, P., Torres, K. E., van de Rijn, M., Van Den Berg, D. J., Van Tine, B. A., Veluvolu, U., Verhaak, R., Voet, D., Voronina, O., Wan, Y., Wang, Z., Wang, J., Weinstein, J. N., Weisenberger, D. J., Wilkerson, M. D., Wilson, R. K., Wise, L., Wong, T., Wong, W., Wrangle, J., Wu, Y., Wyczalkowski, M., Yang, L., Yau, C., Yellapantula, V., Zenklusen, J. C., Zhang, J. . J., Zhang, H., Zhang, H., Zmuda, E. & The Cancer Genome Atlas Research Network Nov 2 2017 In : Cell. 171, 4, p. 950-965.e28

Research output: Research - peer-reviewArticle

Tissue
Sarcoma
Methylation
Refining
Genes
1 Citations

Context Specificity in Causal Signaling Networks Revealed by Phosphoprotein Profiling

Hill, S. M., Nesser, N. K., Johnson-Camacho, K., Jeffress, M., Johnson, A., Boniface, C., Spencer, S. E. F., Lu, Y., Heiser, L. M., Lawrence, Y., Pande, N. T., Korkola, J. E., Gray, J. W., Mills, G. B., Mukherjee, S. & Spellman, P. T. Jan 25 2017 In : Cell Systems. 4, 1, p. 73-83.e10

Research output: Research - peer-reviewArticle

Phosphoproteins
Proteins
Protein Array Analysis
Receptor Protein-Tyrosine Kinases
Phosphotransferases

Correction: Decoupling of the PI3K pathway via mutation necessitates combinatorial treatment in HER2+ breast cancer (PLoS ONE (2015) 10:7 (e0133219) DOI: 10.1371/journal.pone.0133219)

Korkola, J. E. , Collisson, E. A. , Heiser, L. M. , Oates, C. , Bayani, N. , Itani, S. , Esch, A. , Thompson, W. , Griffith, O. L. , Wang, N. J. , Kuo, W. L. , Cooper, B. , Billig, J. , Ziyad, S. , Hung, J. L. , Jakkula, L. , Feiler, H. , Lu, Y. , Mills, G. B. , Spellman, P. T. & 3 others Tomlin, C., Mukherjee, S. & Gray, J. W. Oct 1 2017 In : PLoS ONE. 12, 10, e0186551

Research output: Research - peer-reviewComment/debate

Phosphatidylinositol 3-Kinases
Names
Breast Neoplasms
Mutation
phosphatidylinositol 3-kinase

Erratum to: "Genome co-amplification upregulates a mitotic gene network activity that predicts outcome and response to mitotic protein inhibitors in breast cancer", [Breast Cancer Research, 19, (2017) (17)] DOI: 10.1186/s13058-017-0809-6

Hu, Z. , Mao, J. H. , Curtis, C. , Huang, G. , Gu, S. , Heiser, L. , Lenburg, M. E. , Korkola, J. E. , Bayani, N. , Samarajiwa, S. , Seoane, J. A. , Dane, M. A. , Esch, A. , Feiler, H. S. , Wang, N. J. , Hardwicke, M. A. , Laquerre, S. , Jackson, J. , Wood, K. W. , Weber, B. & 5 others Spellman, P. T., Aparicio, S., Wooster, R., Caldas, C. & Gray, J. W. Feb 9 2017 In : Breast Cancer Research. 19, 1, 17

Research output: Research - peer-reviewComment/debate

Gene Regulatory Networks
Names
Breast
Up-Regulation
Genome