Mehmet Gonen

Research Assistant Professor

  • 1528 Citations
  • 13 h-Index
20082018
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Learning algorithms Engineering & Materials Science
kernel Mathematics
Supervised learning Engineering & Materials Science
Factorization Engineering & Materials Science
Image recognition Engineering & Materials Science
Support vector machines Engineering & Materials Science
Learning Medicine & Life Sciences
Bioinformatics Engineering & Materials Science

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Research Output 2008 2018

  • 1528 Citations
  • 13 h-Index
  • 25 Article
  • 16 Conference contribution

Impact of the ST101 clone on fatality among patients with colistin-resistant Klebsiella pneumoniae infection

Can, F., Menekse, S., Ispir, P., Atac, N., Albayrak, O., Demir, T., Karaaslan, D. C., Karahan, S. N., Kapmaz, M., Azap, O. K., Timurkaynak, F., Yavuz, S. S., Basaran, S., Yoruk, F., Azap, A., Koculu, S., Benzonana, N., Lack, N. A., Gönen, M. & Ergonul, O. May 1 2018 In : Journal of Antimicrobial Chemotherapy. 73, 5, p. 1235-1241 7 p.

Research output: Contribution to journalArticle

Klebsiella Infections
Colistin
Klebsiella pneumoniae
Clone Cells
Mortality

Pan-cancer transcriptional signatures predictive of oncogenic mutations reveal that Fbw7 regulates cancer cell oxidative metabolism

Davis, R. J., Gönen, M., Margineantu, D. H., Handeli, S., Swanger, J., Hoellerbauer, P., Paddison, P. J., Gu, H., Raftery, D., Grim, J. E., Hockenbery, D. M., Margolin, A. A. & Clurman, B. E. May 22 2018 In : Proceedings of the National Academy of Sciences of the United States of America. 115, 21, p. 5462-5467 6 p.

Research output: Contribution to journalArticle

Mutation
Neoplasms
Ubiquitin-Protein Ligases
Mitochondrial Genes
Atlases

A Community Challenge for Inferring Genetic Predictors of Gene Essentialities through Analysis of a Functional Screen of Cancer Cell Lines

Gönen, M. , Weir, B. A. , Cowley, G. S. , Vazquez, F. , Guan, Y. , Jaiswal, A. , Karasuyama, M. , Uzunangelov, V. , Wang, T. , Tsherniak, A. , Howell, S. , Marbach, D. , Hoff, B. , Norman, T. C. , Airola, A. , Bivol, A. , Bunte, K. , Carlin, D. , Chopra, S. , Deran, A. & 25 others Ellrott, K., Gopalacharyulu, P., Graim, K., Kaski, S., Khan, S. A., Newton, Y., Ng, S., Pahikkala, T., Paull, E., Sokolov, A., Tang, H., Tang, J., Wennerberg, K., Xie, Y., Zhan, X., Zhu, F., Aittokallio, T., Mamitsuka, H., Stuart, J. M., Boehm, J. S., Root, D. E., Xiao, G., Stolovitzky, G., Hahn, W. C. & Margolin, A. A. 2017 (Accepted/In press) In : Cell Systems.

Research output: Contribution to journalArticle

Benchmarking
Cell Line
Genes
Neoplasms
Publications
3 Citations

Cytokine response in crimean-congo hemorrhagic fever virus infection

Ergönül, Ö., Şeref, C., Eren, Ş., Çelikbaş, A., Baykam, N., Dokuzoğuz, B., Gönen, M. & Can, F. Oct 1 2017 In : Journal of Medical Virology. 89, 10, p. 1707-1713 7 p.

Research output: Contribution to journalArticle

Crimean-Congo hemorrhagic fever virus
Virus Diseases
Interleukin-8
Interleukin-6
Cytokines
1 Citations

Modeling gene-wise dependencies improves the identification of drug response biomarkers in cancer studies

Nikolova, O., Moser, R., Kemp, C., Gönen, M. & Margolin, A. A. May 1 2017 In : Bioinformatics. 33, 9, p. 1362-1369 8 p.

Research output: Contribution to journalArticle

Pharmacological Biomarkers
Biomarkers
Cancer
Drugs
Genes