Mehmet Gonen

Research Assistant Professor

  • 1639 Citations
  • 14 h-Index
20082018
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Learning algorithms Engineering & Materials Science
kernel Mathematics
Supervised learning Engineering & Materials Science
Factorization Engineering & Materials Science
Learning Medicine & Life Sciences
Image recognition Engineering & Materials Science
Support vector machines Engineering & Materials Science
Bioinformatics Engineering & Materials Science

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Research Output 2008 2018

  • 1639 Citations
  • 14 h-Index
  • 26 Article
  • 16 Conference contribution

Discriminating early- and late-stage cancers using multiple kernel learning on gene sets

Rahimi, A. & Gönen, M., Jul 1 2018, In : Bioinformatics. 34, 13, p. i412-i421

Research output: Contribution to journalArticle

Cancer
Genes
Learning
kernel
Gene

Impact of the ST101 clone on fatality among patients with colistin-resistant Klebsiella pneumoniae infection

Can, F., Menekse, S., Ispir, P., Atac, N., Albayrak, O., Demir, T., Karaaslan, D. C., Karahan, S. N., Kapmaz, M., Azap, O. K., Timurkaynak, F., Yavuz, S. S., Basaran, S., Yoruk, F., Azap, A., Koculu, S., Benzonana, N., Lack, N. A., Gönen, M. & Ergonul, O., May 1 2018, In : Journal of Antimicrobial Chemotherapy. 73, 5, p. 1235-1241 7 p.

Research output: Contribution to journalArticle

Klebsiella Infections
Colistin
Klebsiella pneumoniae
Clone Cells
Mortality

Pan-cancer transcriptional signatures predictive of oncogenic mutations reveal that Fbw7 regulates cancer cell oxidative metabolism

Davis, R. J., Gönen, M., Margineantu, D. H., Handeli, S., Swanger, J., Hoellerbauer, P., Paddison, P. J., Gu, H., Raftery, D., Grim, J. E., Hockenbery, D. M., Margolin, A. A. & Clurman, B. E., May 22 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 21, p. 5462-5467 6 p.

Research output: Contribution to journalArticle

Mutation
Neoplasms
Ubiquitin-Protein Ligases
Mitochondrial Genes
Atlases
1 Citations

A Community Challenge for Inferring Genetic Predictors of Gene Essentialities through Analysis of a Functional Screen of Cancer Cell Lines

Gönen, M. , Weir, B. A. , Cowley, G. S. , Vazquez, F. , Guan, Y. , Jaiswal, A. , Karasuyama, M. , Uzunangelov, V. , Wang, T. , Tsherniak, A. , Howell, S. , Marbach, D. , Hoff, B. , Norman, T. C. , Airola, A. , Bivol, A. , Bunte, K. , Carlin, D. , Chopra, S. , Deran, A. & 25 others Ellrott, K., Gopalacharyulu, P., Graim, K., Kaski, S., Khan, S. A., Newton, Y., Ng, S., Pahikkala, T., Paull, E., Sokolov, A., Tang, H., Tang, J., Wennerberg, K., Xie, Y., Zhan, X., Zhu, F., Aittokallio, T., Mamitsuka, H., Stuart, J. M., Boehm, J. S., Root, D. E., Xiao, G., Stolovitzky, G., Hahn, W. C. & Margolin, A. A., 2017, (Accepted/In press) In : Cell Systems.

Research output: Contribution to journalArticle

Benchmarking
Cell Line
Genes
Neoplasms
Publications
4 Citations

Cytokine response in crimean-congo hemorrhagic fever virus infection

Ergönül, Ö., Şeref, C., Eren, Ş., Çelikbaş, A., Baykam, N., Dokuzoğuz, B., Gönen, M. & Can, F., Oct 1 2017, In : Journal of Medical Virology. 89, 10, p. 1707-1713 7 p.

Research output: Contribution to journalArticle

Crimean-Congo hemorrhagic fever virus
Virus Diseases
Interleukin-8
Interleukin-6
Cytokines