Mehmet Gonen

Research Assistant Professor

  • 1422 Citations
  • 13 h-Index

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Learning algorithms Engineering & Materials Science
kernel Mathematics
Supervised learning Engineering & Materials Science
Factorization Engineering & Materials Science
Image recognition Engineering & Materials Science
Multi-task Learning Mathematics
Learning Medicine & Life Sciences
Support vector machines Engineering & Materials Science

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Research Output 2008 2017

  • 1422 Citations
  • 13 h-Index
  • 23 Article
  • 16 Conference contribution
  • 1 Review article

A Community Challenge for Inferring Genetic Predictors of Gene Essentialities through Analysis of a Functional Screen of Cancer Cell Lines

Gönen, M. , Weir, B. A. , Cowley, G. S. , Vazquez, F. , Guan, Y. , Jaiswal, A. , Karasuyama, M. , Uzunangelov, V. , Wang, T. , Tsherniak, A. , Howell, S. , Marbach, D. , Hoff, B. , Norman, T. C. , Airola, A. , Bivol, A. , Bunte, K. , Carlin, D. , Chopra, S. , Deran, A. & 25 others Ellrott, K., Gopalacharyulu, P., Graim, K., Kaski, S., Khan, S. A., Newton, Y., Ng, S., Pahikkala, T., Paull, E., Sokolov, A., Tang, H., Tang, J., Wennerberg, K., Xie, Y., Zhan, X., Zhu, F., Aittokallio, T., Mamitsuka, H., Stuart, J. M., Boehm, J. S., Root, D. E., Xiao, G., Stolovitzky, G., Hahn, W. C. & Margolin, A. A. 2017 (Accepted/In press) In : Cell Systems.

Research output: Contribution to journalArticle

Cell Line

Cytokine response in crimean-congo hemorrhagic fever virus infection

Ergönül, Ö., Şeref, C., Eren, Ş., Çelikbaş, A., Baykam, N., Dokuzoğuz, B., Gönen, M. & Can, F. Oct 1 2017 In : Journal of Medical Virology. 89, 10, p. 1707-1713 7 p.

Research output: Contribution to journalArticle

Crimean-Congo hemorrhagic fever virus
Virus Diseases
1 Citations

Modeling gene-wise dependencies improves the identification of drug response biomarkers in cancer studies

Nikolova, O., Moser, R., Kemp, C., Gönen, M. & Margolin, A. A. May 1 2017 In : Bioinformatics. 33, 9, p. 1362-1369 8 p.

Research output: Contribution to journalArticle

Pharmacological Biomarkers

AUC Maximization in Bayesian hierarchical models

Gönen, M. 2016 Frontiers in Artificial Intelligence and Applications. IOS Press, Vol. 285, p. 21-27 7 p. (Frontiers in Artificial Intelligence and Applications; vol. 285)

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Information retrieval
3 Citations

DREAMTools: A Python package for scoring collaborative challenges

Cokelaer, T. , Bansal, M. , Bare, C. , Bilal, E. , Bot, B. M. , Chaibub Neto, E. , Eduati, F. , de la Fuente, A. , Gönen, M. , Hill, S. M. , Hoff, B. , Karr, J. R. , Küffner, R. , Menden, M. P. , Meyer, P. , Norel, R. , Pratap, A. , Prill, R. J. , Weirauch, M. T. , Costello, J. C. & 2 others Stolovitzky, G. & Saez-Rodriguez, J. 2016 In : F1000Research. 4, 1030

Research output: Contribution to journalArticle

Computational methods
Learning systems