• 65500 Citations
  • 111 h-Index
1971 …2020
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Research Output 1971 2020

2012
32 Citations (Scopus)

Genomics: The breast cancer landscape

Gray, J. & Druker, B., Jun 21 2012, In : Nature. 486, 7403, p. 328-329 2 p.

Research output: Contribution to journalArticle

Neoplastic Gene Expression Regulation
Neoplastic Cell Transformation
DNA Copy Number Variations
Genetic Translocation
Aromatase Inhibitors
59 Citations (Scopus)

Identification of PADI2 as a potential breast cancer biomarker and therapeutic target

McElwee, J. L., Mohanan, S., Griffith, O. L., Breuer, H. C., Anguish, L. J., Cherrington, B. D., Palmer, A. M., Howe, L. R., Subramanian, V., Causey, C. P., Thompson, P. R., Gray, J. & Coonrod, S. A., Oct 30 2012, In : BMC Cancer. 12, 500.

Research output: Contribution to journalArticle

Tumor Biomarkers
Breast Neoplasms
Cell Line
cdc Genes
Neoplasms
14 Citations (Scopus)

Integrating biological knowledge into variable selection: an empirical Bayes approach with an application in cancer biology

Hill, S. M., Neve, R. M., Bayani, N., Kuo, W. L., Ziyad, S., Spellman, P., Gray, J. & Mukherjee, S., May 11 2012, In : BMC Bioinformatics. 13, 1, 94.

Research output: Contribution to journalArticle

Empirical Bayes
Variable Selection
Biology
Cancer
Specifications
23 Citations (Scopus)

Learning invariant features of tumor signatures

Le, Q. V., Han, J., Gray, J., Spellman, P., Borowsky, A. & Parvin, B., 2012, Proceedings - International Symposium on Biomedical Imaging. p. 302-305 4 p. 6235544

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Tumors
Learning
Tissue
Network layers
Neoplasms
40 Citations (Scopus)

Lectin chromatography/mass spectrometry discovery workflow identifies putative biomarkers of aggressive breast cancers

Drake, P. M., Schilling, B., Niles, R. K., Prakobphol, A., Li, B., Jung, K., Cho, W., Braten, M., Inerowicz, H. D., Williams, K., Albertolle, M., Held, J. M., Iacovides, D., Sorensen, D. J., Griffith, O. L., Johansen, E., Zawadzka, A. M., Cusack, M. P., Allen, S., Gormley, M. & 6 others, Hall, S. C., Witkowska, H. E., Gray, J., Regnier, F., Gibson, B. W. & Fisher, S. J., Apr 6 2012, In : Journal of Proteome Research. 11, 4, p. 2508-2520 13 p.

Research output: Contribution to journalArticle

Workflow
Biomarkers
Chromatography
Lectins
Mass spectrometry
26 Citations (Scopus)

Loss of cell-surface laminin anchoring promotes tumor growth and is associated with poor clinical outcomes

Akhavan, A., Griffith, O. L., Soroceanu, L., Leonoudakis, D., Luciani-Torres, M. G., Daemen, A., Gray, J. & Muschler, J., May 15 2012, In : Cancer Research. 72, 10, p. 2578-2588 11 p.

Research output: Contribution to journalArticle

Laminin
Growth
Neoplasms
Brain Neoplasms
Disease Progression
30 Citations (Scopus)

Omics and therapy - A basis for precision medicine

Garay, J. P. & Gray, J., Apr 2012, In : Molecular Oncology. 6, 2, p. 128-139 12 p.

Research output: Contribution to journalArticle

Precision Medicine
Genome
Neoplasms
Disease Management
Therapeutics
4 Citations (Scopus)

Optimization-based inference for temporally evolving networks with applications in biology

Chang, Y. H., Gray, J. & Tomlin, C., Dec 1 2012, In : Journal of Computational Biology. 19, 12, p. 1307-1323 17 p.

Research output: Contribution to journalArticle

Genetic Network
Biological Networks
Biology
Research Design
Costs and Cost Analysis
249 Citations (Scopus)

Pathologic complete response predicts recurrence-free survival more effectively by cancer subset: Results from the I-SPY 1 TRIAL - CALGB 150007/150012, ACRIN 6657

Esserman, L. J., Berry, D. A., DeMichele, A., Carey, L., Davis, S. E., Buxton, M., Hudis, C., Gray, J., Perou, C., Yau, C., Livasy, C., Krontiras, H., Montgomery, L., Tripathy, D., Lehman, C., Liu, M. C., Olopade, O. I., Rugo, H. S., Carpenter, J. T., Dressler, L. & 8 others, Chhieng, D., Singh, B., Mies, C., Rabban, J., Chen, Y. Y., Giri, D., Van't Veer, L. & Hylton, N., Sep 10 2012, In : Journal of Clinical Oncology. 30, 26, p. 3242-3249 8 p.

Research output: Contribution to journalArticle

Recurrence
Survival
Hormones
Neoplasms
Breast Neoplasms
46 Citations (Scopus)

Rab25 increases cellular ATP and glycogen stores protecting cancer cells from bioenergetic stress

Cheng, K. W., Agarwal, R., Mitra, S., Lee, J. S., Carey, M., Gray, J. & Mills, G., Feb 2012, In : EMBO Molecular Medicine. 4, 2, p. 125-141 17 p.

Research output: Contribution to journalArticle

Glycogen
Energy Metabolism
Adenosine Triphosphate
Neoplasms
Autophagy
266 Citations (Scopus)

Subtype and pathway specific responses to anticancer compounds in breast cancer

Heiser, L., Sadanandam, A., Kuo, W. L., Benz, S. C., Goldstein, T. C., Ng, S., Gibb, W. J., Wang, N. J., Ziyad, S., Tong, F., Bayani, N., Hu, Z., Billig, J. I., Dueregger, A., Lewis, S., Jakkula, L., Korkola, J., Durinck, S., Pepin, F., Guan, Y. & 23 others, Purdom, E., Neuvial, P., Bengtsson, H., Wood, K. W., Smith, P. G., Vassilev, L. T., Hennessy, B. T., Greshock, J., Bachman, K. E., Hardwicke, M. A., Park, J. W., Marton, L. J., Wolf, D. M., Collisson, E. A., Neve, R. M., Mills, G., Speed, T. P., Feiler, H., Richard, F. W., Haussler, D., Stuart, J. M., Gray, J. & Spellman, P., Feb 21 2012, In : Proceedings of the National Academy of Sciences of the United States of America. 109, 8, p. 2724-2729 6 p.

Research output: Contribution to journalArticle

Breast Neoplasms
Cell Line
Pharmaceutical Preparations
Therapeutics
Neoplasms
37 Citations (Scopus)

The transcription factor ZNF217 Is a prognostic biomarker and therapeutic target during breast cancer progression

Littlepage, L. E., Adler, A. S., Kouros-Mehr, H., Huang, G., Chou, J., Krig, S. R., Griffi th, O. L., Korkola, J., Qu, K., Lawson, D. A., Xue, Q., Sternlicht, M. D., Dijkgraaf, G. J. P., Yaswen, P., Rugo, H. S., Sweeney, C. A., Collins, C. C., Gray, J., Chang, H. Y. & Werb, Z., Jul 2012, In : Cancer Discovery. 2, 7, p. 638-651 14 p.

Research output: Contribution to journalArticle

triciribine
Transcription Factors
Biomarkers
Breast Neoplasms
Neoplasms
32 Citations (Scopus)

What are we learning from the cancer genome?

Collisson, E. A., Cho, R. J. & Gray, J., Nov 2012, In : Nature Reviews Clinical Oncology. 9, 11, p. 621-630 10 p.

Research output: Contribution to journalArticle

Learning
Genome
Neoplasms
Technology
Precision Medicine
28 Citations (Scopus)

Xenografts faithfully recapitulate breast cancer-specific gene expression patterns of parent primary breast tumors

Petrillo, L. A., Wolf, D. M., Kapoun, A. M., Wang, N. J., Barczak, A., Xiao, Y., Korkaya, H., Baehner, F., Lewicki, J., Wicha, M., Park, J. W., Spellman, P., Gray, J., Van'T Veer, L. & Esserman, L. J., Oct 2012, In : Breast Cancer Research and Treatment. 135, 3, p. 913-922 10 p.

Research output: Contribution to journalArticle

Neoplasm Genes
Heterografts
Breast Neoplasms
Gene Expression
Neoplasms
2013
480 Citations (Scopus)

A colorectal cancer classification system that associates cellular phenotype and responses to therapy

Sadanandam, A., Lyssiotis, C. A., Homicsko, K., Collisson, E. A., Gibb, W. J., Wullschleger, S., Ostos, L. C. G., Lannon, W. A., Grotzinger, C., Del Rio, M., Lhermitte, B., Olshen, A. B., Wiedenmann, B., Cantley, L. C., Gray, J. & Hanahan, D., May 2013, In : Nature Medicine. 19, 5, p. 619-625 7 p.

Research output: Contribution to journalArticle

Colorectal Neoplasms
Phenotype
Chemotherapy
Disease-Free Survival
Filamins

Adaptive H-extrema for automatic immunogold particle detection

Thibault, G., Iljin, K., Arthur, C., Shafran, I. & Gray, J., 2013, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). PART 2 ed. Vol. 8259 LNCS. p. 238-245 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8259 LNCS, no. PART 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Extremum
Multiple Classifiers
Classifiers
Multiple Scales
Gold
10 Citations (Scopus)

A robust prognostic signature for hormone-positive node-negative breast cancer

Griffith, O. L., Pepin, F., Enache, O. M., Heiser, L., Collisson, E. A., Spellman, P. & Gray, J., Oct 11 2013, In : Genome Medicine. 5, 10, 92.

Research output: Contribution to journalArticle

Hormones
Breast Neoplasms
Recurrence
Genes
Survival Analysis
81 Citations (Scopus)

CpG island shore methylation regulates caveolin-1 expression in breast cancer

Rao, X., Evans, J., Chae, H., Pilrose, J., Kim, S., Yan, P., Huang, R. L., Lai, H. C., Lin, H., Liu, Y., Miller, D., Rhee, J. K., Huang, Y. W., Gu, F., Gray, J., Huang, T. M. & Nephew, K. P., Sep 19 2013, In : Oncogene. 32, 38, p. 4519-4528 10 p.

Research output: Contribution to journalArticle

Caveolin 1
CpG Islands
Methylation
Breast Neoplasms
DNA Methylation
45 Citations (Scopus)

C-Src modulates estrogen-induced stress and apoptosis in estrogen-deprived breast cancer cells

Fan, P., Griffith, O. L., Agboke, F. A., Anur, P., Zou, X., McDaniel, R. E., Creswell, K., Kim, S. H., Katzenellenbogen, J. A., Gray, J. & Jordan, V. C., Jul 15 2013, In : Cancer Research. 73, 14, p. 4510-4520 11 p.

Research output: Contribution to journalArticle

Estrogens
MCF-7 Cells
Apoptosis
Breast Neoplasms
Eukaryotic Initiation Factor-2
203 Citations (Scopus)

Glutamine Sensitivity Analysis Identifies the xCT Antiporter as a Common Triple-Negative Breast Tumor Therapeutic Target

Timmerman, L., Holton, T., Yuneva, M., Louie, R., Padró, M., Daemen, A., Hu, M., Chan, D., Ethier, S., van'tVeer, L., Polyak, K., McCormick, F. & Gray, J., Oct 14 2013, In : Cancer Cell. 24, 4, p. 450-465 16 p.

Research output: Contribution to journalArticle

Antiporters
Glutamine
Breast Neoplasms
Sulfasalazine
Neoplasms
27 Citations (Scopus)

Identification and quantification of AKT isoforms and phosphoforms in breast cancer using a novel nanofluidic immunoassay

Iacovides, D. C., Johnson, A. B., Wang, N., Boddapati, S., Korkola, J. & Gray, J., Nov 2013, In : Molecular and Cellular Proteomics. 12, 11, p. 3210-3220 11 p.

Research output: Contribution to journalArticle

Nanofluidics
Immunoassay
Protein Isoforms
Breast Neoplasms
Assays
43 Citations (Scopus)

Integrated analysis of genome-wide DNA methylation and gene expression profiles in molecular subtypes of breast cancer

Rhee, J. K., Kim, K., Chae, H., Evans, J., Yan, P., Zhang, B. T., Gray, J., Spellman, P., Huang, T. H. M., Nephew, K. P. & Kim, S., Oct 2013, In : Nucleic Acids Research. 41, 18, p. 8464-8474 11 p.

Research output: Contribution to journalArticle

DNA Methylation
Transcriptome
Genome
Breast Neoplasms
Gene Expression
61 Citations (Scopus)

Invariant delineation of nuclear architecture in glioblastoma multiforme for clinical and molecular association

Chang, H., Han, J., Borowsky, A., Loss, L., Gray, J., Spellman, P. & Parvin, B., 2013, In : IEEE Transactions on Medical Imaging. 32, 4, p. 670-682 13 p., 6374258.

Research output: Contribution to journalArticle

Glioblastoma
Tumors
Tissue
Neoplasms
Bioinformatics
142 Citations (Scopus)

Metrics other than potency reveal systematic variation in responses to cancer drugs

Fallahi-Sichani, M., Honarnejad, S., Heiser, L., Gray, J. & Sorger, P. K., Nov 2013, In : Nature Chemical Biology. 9, 11, p. 708-714 7 p.

Research output: Contribution to journalArticle

Pharmaceutical Preparations
Neoplasms
Single-Cell Analysis
Drug Delivery Systems
Phosphatidylinositol 3-Kinases
136 Citations (Scopus)

Modeling precision treatment of breast cancer.

Daemen, A., Griffith, O. L., Heiser, L. M., Wang, N. J., Enache, O. M., Sanborn, Z., Pepin, F., Durinck, S., Korkola, J. E., Griffith, M., Hur, J. S., Huh, N., Chung, J., Cope, L., Fackler, M. J., Umbricht, C., Sukumar, S., Seth, P., Sukhatme, V. P., Jakkula, L. R. & 7 others, Lu, Y., Mills, G. B., Cho, R. J., Collisson, E. A., van't Veer, L. J., Spellman, P. T. & Gray, J. W., 2013, In : Genome Biology. 14, 10

Research output: Contribution to journalArticle

breast neoplasms
cancer
Breast Neoplasms
therapeutics
modeling
269 Citations (Scopus)

Prognostically relevant gene signatures of high-grade serous ovarian carcinoma

Verhaak, R. G. W., Tamayo, P., Yang, J. Y., Hubbard, D., Zhang, H., Creighton, C. J., Fereday, S., Lawrence, M., Carter, S. L., Mermel, C. H., Kostic, A. D., Etemadmoghadam, D., Saksena, G., Cibulskis, K., Duraisamy, S., Levanon, K., Sougnez, C., Tsherniak, A., Gomez, S., Onofrio, R. & 21 others, Gabriel, S., Chin, L., Zhang, N., Spellman, P., Zhang, Y., Akbani, R., Hoadley, K. A., Kahn, A., Köbel, M., Huntsman, D., Soslow, R. A., Defazio, A., Birrer, M. J., Gray, J., Weinstein, J. N., Bowtell, D. D., Drapkin, R., Mesirov, J. P., Getz, G., Levine, D. A. & Meyerson, M., Jan 2 2013, In : Journal of Clinical Investigation. 123, 1, p. 517-525 9 p.

Research output: Contribution to journalArticle

Ovarian Neoplasms
Carcinoma
Genes
Platinum
Survival
120 Citations (Scopus)

Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges

Lovci, M. T., Ghanem, D., Marr, H., Arnold, J., Gee, S., Parra, M., Liang, T. Y., Stark, T. J., Gehman, L. T., Hoon, S., Massirer, K. B., Pratt, G. A., Black, D. L., Gray, J., Conboy, J. G. & Yeo, G. W., Dec 2013, In : Nature Structural and Molecular Biology. 20, 12, p. 1434-1442 9 p.

Research output: Contribution to journalArticle

Alternative Splicing
RNA
Exons
Messenger RNA
Proteins
88 Citations (Scopus)

Single-molecule superresolution imaging allows quantitative analysis of RAF multimer formation and signaling

Nan, X., Collisson, E. A., Lewis, S., Huang, J., Tamgüney, T. M., Liphardt, J. T., McCormick, F., Gray, J. & Chu, S., Nov 12 2013, In : Proceedings of the National Academy of Sciences of the United States of America. 110, 46, p. 18519-18524 6 p.

Research output: Contribution to journalArticle

Microscopy
Spatial Analysis
Membrane Fusion
Protein-Serine-Threonine Kinases
Neoplasms
42 Citations (Scopus)

Targeting uPAR with antagonistic recombinant human antibodies in aggressive breast cancer

Le Beau, A. M., Duriseti, S., Murphy, S. T., Pepin, F., Hann, B., Gray, J., Van Brocklin, H. F. & Craik, C. S., Apr 1 2013, In : Cancer Research. 73, 7, p. 2070-2081 12 p.

Research output: Contribution to journalArticle

Breast Neoplasms
Antibodies
Triple Negative Breast Neoplasms
Plasminogen
Heterografts
2014
113 Citations (Scopus)

A community computational challenge to predict the activity of pairs of compounds

Cellworks Group & NCI DREAM Community, Dec 1 2014, In : Nature Biotechnology. 32, 12, p. 1213-1222 10 p.

Research output: Contribution to journalArticle

Computer Simulation
Drug Combinations
Transcriptome
Gene expression
Screening
257 Citations (Scopus)

A community effort to assess and improve drug sensitivity prediction algorithms

NCI DREAM Community, Dec 1 2014, In : Nature Biotechnology. 32, 12, p. 1202-1212 11 p.

Research output: Contribution to journalArticle

Reverse engineering
Microarrays
Gene expression
Pharmaceutical Preparations
Medicine
17 Citations (Scopus)

Amplification and over-expression of MAP3K3 gene in human breast cancer promotes formation and survival of breast cancer cells

Zhang, H., Fan, Y., Ge, N., Wang, X., Sun, W., Mao, R., Bu, W., Creighton, C. J., Zheng, P., Vasudevan, S., An, L., Yang, J., Zhao, Y. J., Zhang, H., Li, X. N., Rao, P. H., Leung, E., Lu, Y. J., Gray, J., Schiff, R. & 3 others, Hilsenbeck, S. G., Osborne, C. K. & Yang, J., Jan 2014, In : Journal of Pathology. 232, 1, p. 75-86 12 p.

Research output: Contribution to journalArticle

Breast Neoplasms
Gene Expression
Survival
MAP Kinase Kinase Kinase 3
Breast
26 Citations (Scopus)

Causal network inference using biochemical kinetics

Oates, C. J., Dondelinger, F., Bayani, N., Korkola, J., Gray, J. & Mukherjee, S., Sep 1 2014, In : Bioinformatics. 30, 17

Research output: Contribution to journalArticle

Kinetics
Kinetic parameters
Prediction
Graph in graph theory
Unknown
29 Citations (Scopus)

Copy Number Gain of hsa-miR-569 at 3q26.2 Leads to Loss of TP53INP1 and Aggressiveness of Epithelial Cancers

Chaluvally-Raghavan, P., Zhang, F., Pradeep, S., Hamilton, M. P., Zhao, X., Rupaimoole, R., Moss, T., Lu, Y., Yu, S., Pecot, C. V., Aure, M. R., Peuget, S., Rodriguez-Aguayo, C., Han, H. D., Zhang, D., Venkatanarayan, A., Krohn, M., Kristensen, V. N., Gagea, M., Ram, P. & 11 others, Liu, W., Lopez-Berestein, G., Lorenzi, P. L., Børresen-Dale, A. L., Chin, K-Y., Gray, J., Dusetti, N. J., McGuire, S. E., Flores, E. R., Sood, A. K. & Mills, G., Dec 8 2014, In : Cancer Cell. 26, 6, p. 863-879 17 p.

Research output: Contribution to journalArticle

Ovarian Neoplasms
Breast Neoplasms
Neoplasms
MicroRNAs
Cisplatin
139 Citations (Scopus)

CUL4A induces epithelial-mesenchymal transition and promotes cancer metastasis by regulating ZEB1 expression

Wang, Y., Wen, M., Kwon, Y., Xu, Y., Liu, Y., Zhang, P., He, X., Wang, Q., Huang, Y., Jen, K. Y., Labarge, M. A., You, L., Kogan, S. C., Gray, J., Mao, J. H. & Wei, G., Jan 15 2014, In : Cancer Research. 74, 2, p. 520-531 12 p.

Research output: Contribution to journalArticle

Epithelial-Mesenchymal Transition
Breast Neoplasms
Neoplasm Metastasis
Neoplasms
Carcinogenesis
28 Citations (Scopus)

Detecting cancer by monitoring circulating tumor DNA.

Spellman, P. & Gray, J., 2014, In : Nature Medicine. 20, 5, p. 474-475 2 p.

Research output: Contribution to journalArticle

Neoplasm DNA
Tumor Biomarkers
Non-Small Cell Lung Carcinoma
DNA
Neoplasms
10 Citations (Scopus)

Do breast cancer cell lines provide a relevant model of the patient tumor methylome?

Cope, L. M., Fackler, M. J., Lopez-Bujanda, Z., Wolff, A. C., Visvanathan, K., Gray, J., Sukumar, S. & Umbricht, C. B., Aug 26 2014, In : PLoS One. 9, 8, e105545.

Research output: Contribution to journalArticle

breast neoplasms
Tumors
Cells
cell lines
Breast Neoplasms
10 Citations (Scopus)

Endocytic trafficking of laminin is controlled by dystroglycan and is disrupted in cancers

Leonoudakis, D., Huang, G., Akhavan, A., Fata, J. E., Singh, M., Gray, J. & Muschler, J., 2014, In : Journal of Cell Science. 127, 22, p. 4894-4903 10 p.

Research output: Contribution to journalArticle

Dystroglycans
Laminin
Neoplasms
Basement Membrane
Laminin Receptors
21 Citations (Scopus)

Exact reconstruction of gene regulatory networks using compressive sensing

Chang, Y. H., Gray, J. & Tomlin, C. J., 2014, In : BMC Bioinformatics. 15, p. 400 1 p.

Research output: Contribution to journalArticle

Compressive Sensing
Gene Regulatory Networks
Gene Regulatory Network
Genes
Connectivity
8 Citations (Scopus)

Identification of gene regulation patterns underlying both oestrogen- and tamoxifen-stimulated cell growth through global gene expression profiling in breast cancer cells

Fan, P., Cunliffe, H. E., Griffith, O. L., Agboke, F. A., Ramos, P., Gray, J. & Jordan, V. C., 2014, In : European Journal of Cancer. 50, 16, p. 2877-2886 10 p.

Research output: Contribution to journalArticle

Gene Expression Profiling
Tamoxifen
Estrogens
Breast Neoplasms
Growth
11 Citations (Scopus)

Joint estimation of multiple related biological networks

Oates, C. J., Korkola, J., Gray, J. & Mukherjee, S., Sep 1 2014, In : Annals of Applied Statistics. 8, 3, p. 1892-1919 28 p.

Research output: Contribution to journalArticle

Biological Networks
Graphical Models
Molecular biology
Bayesian networks
Exchangeability
107 Citations (Scopus)

Nanoparticle-mediated systemic delivery of siRNA for treatment of cancers and viral infections

Draz, M. S., Fang, B. A., Zhang, P., Hu, Z., Gu, S., Weng, K. C., Gray, J. & Chen, F. F., 2014, In : Theranostics. 4, 9, p. 872-892 21 p.

Research output: Contribution to journalArticle

Virus Diseases
Nanoparticles
Small Interfering RNA
Metal Nanoparticles
Neoplasms
40 Citations (Scopus)

Overcoming endocrine resistance due to reduced PTEN levels in estrogen receptor-positive breast cancer by co-targeting mammalian target of rapamycin, protein kinase B, or mitogen-activated protein kinase kinase

Fu, X., Creighton, C. J., Biswal, N. C., Kumar, V., Shea, M., Herrera, S., Contreras, A., Gutierrez, C., Wang, T., Nanda, S., Giuliano, M., Morrison, G., Nardone, A., Karlin, K. L., Westbrook, T. F., Heiser, L., Anur, P., Spellman, P., Guichard, S. M., Smith, P. D. & 10 others, Davies, B. R., Klinowska, T., Lee, A. V., Mills, G., Rimawi, M. F., Hilsenbeck, S. G., Gray, J., Joshi, A., Osborne, C. K. & Schiff, R., Sep 11 2014, In : Breast Cancer Research. 16, 5, 430.

Research output: Contribution to journalArticle

TOR Serine-Threonine Kinases
Proto-Oncogene Proteins c-akt
Mitogen-Activated Protein Kinase Kinases
Phosphatidylinositol 3-Kinase
Phosphoric Monoester Hydrolases

Preface

Mendelsohn, J., Gray, J., Howley, P. M., Israel, M. A. & Thompson, C. B., Mar 2014, In : Unknown Journal.

Research output: Contribution to journalArticle

48 Citations (Scopus)

Reconciliation of classification systems defining molecular subtypes of colorectal cancer: Interrelationships and clinical implications

Sadanandam, A., Wang, X., De Sousa E Melo, F., Gray, J., Vermeulen, L., Hanahan, D. & Medema, J. P., Feb 1 2014, In : Cell Cycle. 13, 3, p. 353-357 5 p.

Research output: Contribution to journalArticle

Colorectal Neoplasms
Gene Expression
Therapeutics
4 Citations (Scopus)

Reply to Colorectal cancer classification based on gene expression is not associated with FOLFIRI response

Sadanandam, A., Gray, J. & Hanahan, D., Nov 1 2014, In : Nature Medicine. 20, 11, p. 1231-1232 2 p.

Research output: Contribution to journalArticle

Gene expression
1 Citation (Scopus)

The Molecular Basis of Cancer: Fourth Edition

Mendelsohn, J., Gray, J., Howley, P. M., Israel, M. A. & Thompson, C. B., Mar 2014, Elsevier Inc. 863 p.

Research output: Book/ReportBook

Neoplasms
Routine Diagnostic Tests
Clinical Trials
Therapeutics
Research
45 Citations (Scopus)

Transcription Restores DNA Repair to Heterochromatin, Determining Regional Mutation Rates in Cancer Genomes

Zheng, C., Wang, N. J., Chung, J., Moslehi, H., Sanborn, J. Z., Hur, J. S., Collisson, E. A., Vemula, S. S., Naujokas, A., Chiotti, K. E., Cheng, J. B., Fassihi, H., Blumberg, A. J., Bailey, C. V., Fudem, G. M., Mihm, F. G., Cunningham, B. B., Neuhaus, I. M., Liao, W., Oh, D. H. & 10 others, Cleaver, J. E., LeBoit, P. E., Costello, J. F., Lehmann, A. R., Gray, J., Spellman, P., Arron, S. T., Huh, N., Purdom, E. & Cho, R. J., Nov 20 2014, In : Cell Reports. 9, 4, p. 1228-1234 7 p.

Research output: Contribution to journalArticle

Heterochromatin
Mutation Rate
Transcription
DNA Repair
Repair

Understanding and Using Information about Cancer Genomes

Spellman, P., Stuart, J. & Gray, J., Mar 2014, The Molecular Basis of Cancer: Fourth Edition. Elsevier Inc.

Research output: Chapter in Book/Report/Conference proceedingChapter

Genome
Neoplasms
2015
93 Citations (Scopus)

Cationic polymer modified mesoporous silica nanoparticles for targeted siRNA delivery to HER2+ breast cancer

Ngamcherdtrakul, W., Morry, J., Gu, S., Castro, D. J., Goodyear, S. M., Sangvanich, T., Reda, M. M., Lee, R., Mihelic, S. A., Beckman, B. L., Hu, Z., Gray, J. & Yantasee, W., May 13 2015, In : Advanced Functional Materials. 25, 18, p. 2646-2659 14 p.

Research output: Contribution to journalArticle

breast
Silicon Dioxide
Small Interfering RNA
delivery
Polymers