• 66579 Citations
  • 112 h-Index
1971 …2020

Research output per year

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Research Output

2011

Optimization-based inference for temporally evolving Boolean networks with applications in biology

Chang, Y. H., Gray, J. & Tomlin, C., Sep 29 2011, Proceedings of the 2011 American Control Conference, ACC 2011. p. 4129-4134 6 p. 5991347. (Proceedings of the American Control Conference).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Subtypes of pancreatic ductal adenocarcinoma and their differing responses to therapy

Collisson, E. A., Sadanandam, A., Olson, P., Gibb, W. J., Truitt, M., Gu, S., Cooc, J., Weinkle, J., Kim, G. E., Jakkula, L., Feiler, H. S., Ko, A. H., Olshen, A. B., Danenberg, K. L., Tempero, M. A., Spellman, P. T., Hanahan, D. & Gray, J. W., Apr 1 2011, In : Nature medicine. 17, 4, p. 500-503 4 p.

Research output: Contribution to journalArticle

592 Scopus citations

Temporal dissection of tumorigenesis in primary cancers

Durinck, S., Ho, C., Wang, N. J., Liao, W., Jakkula, L. R., Collisson, E. A., Pons, J., Chan, S. W., Lam, E. T., Chu, C., Park, K., Hong, S. W., Hur, J. S., Huh, N., Neuhaus, I. M., Yu, S. S., Grekin, R. C., Mauro, T. M., Cleaver, J. E., Kwok, P. Y. & 12 others, LeBoit, P. E., Getz, G., Cibulskis, K., Aster, J. C., Huang, H., Purdom, E., Li, J., Bolund, L., Arron, S. T., Gray, J. W., Spellman, P. T. & Cho, R. J., Jun 29 2011, In : Cancer discovery. 1, 2, p. 137-143 7 p.

Research output: Contribution to journalArticle

148 Scopus citations

Topographic enhancement mapping of the cancer-associated breast stroma using breast MRI

Nabavizadeh, N., Klifa, C., Newitt, D., Lu, Y., Chen, Y. Y., Hsu, H., Fisher, C., Tokayasu, T., Olshen, A. B., Spellman, P., Gray, J. W., Hylton, N. & Park, C. C., Apr 1 2011, In : Integrative Biology. 3, 4, p. 490-496 7 p.

Research output: Contribution to journalArticle

12 Scopus citations
2010

Activity of the kinesin spindle protein inhibitor ispinesib (SB-715992) in models of breast cancer

Purcell, J. W., Davis, J., Reddy, M., Martin, S., Samayoa, K., Vo, H., Thomsen, K., Bean, P., Kuo, W. L., Ziyad, S., Billig, J., Feiler, H. S., Gray, J. W., Wood, K. W. & Cases, S., Jan 15 2010, In : Clinical Cancer Research. 16, 2, p. 566-576 11 p.

Research output: Contribution to journalArticle

54 Scopus citations

An ODE model for the HER2/3-AKT signaling pathway in cancers that overexpress HER2

Itani, S., Gray, J. & Tomlin, C. J., Oct 15 2010, Proceedings of the 2010 American Control Conference, ACC 2010. p. 1235-1241 7 p. 5531034. (Proceedings of the 2010 American Control Conference, ACC 2010).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

A technical assessment of the utility of reverse phase protein arrays for the study of the functional proteome in non-microdissected human breast cancers

Hennessy, B. T., Lu, Y., Gonzalez-Angulo, A. M., Carey, M. S., Myhre, S., Ju, Z., Davies, M. A., Liu, W., Coombes, K., Meric-Bernstam, F., Bedrosian, I., McGahren, M., Agarwal, R., Zhang, F., Overgaard, J., Alsner, J., Neve, R. M., Kuo, W. L., Gray, J. W., Borresen-Dale, A. L. & 1 others, Mills, G. B., Dec 1 2010, In : Clinical Proteomics. 6, 4, p. 129-151 23 p.

Research output: Contribution to journalArticle

145 Scopus citations

Breast cancer genomes - form and function

Korkola, J. & Gray, J. W., Feb 1 2010, In : Current Opinion in Genetics and Development. 20, 1, p. 4-14 11 p.

Research output: Contribution to journalReview article

37 Scopus citations

Cancer: Genomics of metastasis

Gray, J., Apr 15 2010, In : Nature. 464, 7291, p. 989-990 2 p.

Research output: Contribution to journalShort survey

10 Scopus citations

ERBB receptor regulation of ESX/ELF3 promotes invasion in breast epithelial cells

Coppe, J. P., Amend, C., Semeiks, J., Baehner, F. L., Bayani, N., Campisi, J., Benz, C. C., Gray, J. W. & Neve, R. M., Nov 19 2010, In : Open Cancer Journal. 3, SPEC. ISSUE 1, p. 89-100 12 p.

Research output: Contribution to journalArticle

4 Scopus citations

Exon-level microarray analyses identify alternative splicing programs in breast cancer

Lapuk, A., Marr, H., Jakkula, L., Pedro, H., Bhattacharya, S., Purdom, E., Hu, Z., Simpson, K., Pachter, L., Durinck, S., Wang, N., Parvin, B., Fontenay, G., Speed, T., Garbe, J., Stampfer, M., Bayandorian, H., Dorton, S., Clark, T. A., Schweitzer, A. & 5 others, Wyrobek, A., Feiler, H., Spellman, P., Conboy, J. & Gray, J. W., Jul 1 2010, In : Molecular Cancer Research. 8, 7, p. 961-974 14 p.

Research output: Contribution to journalArticle

85 Scopus citations

HER2 signaling pathway activation and response of breast cancer cells to HER2-targeting agents is dependent strongly on the 3D microenvironment

Weigelt, B., Lo, A. T., Park, C. C., Gray, J. W. & Bissell, M. J., Jul 1 2010, In : Breast Cancer Research and Treatment. 122, 1, p. 35-43 9 p.

Research output: Contribution to journalArticle

190 Scopus citations

High-throughput method for analyzing methylation of CpGs in targeted genomic regions

Nautiyal, S., Carlton, V. E. H., Lu, Y., Ireland, J. S., Flaucher, D., Moorhead, M., Gray, J. W., Spellman, P., Mindrinos, M., Berg, P. & Faham, M., Jul 13 2010, In : Proceedings of the National Academy of Sciences of the United States of America. 107, 28, p. 12587-12592 6 p.

Research output: Contribution to journalArticle

28 Scopus citations

Integrated Genomic Analysis Identifies Clinically Relevant Subtypes of Glioblastoma Characterized by Abnormalities in PDGFRA, IDH1, EGFR, and NF1

Verhaak, R. G. W., Hoadley, K. A., Purdom, E., Wang, V., Qi, Y., Wilkerson, M. D., Miller, C. R., Ding, L., Golub, T., Mesirov, J. P., Alexe, G., Lawrence, M., O'Kelly, M., Tamayo, P., Weir, B. A., Gabriel, S., Winckler, W., Gupta, S., Jakkula, L., Feiler, H. S. & 13 others, Hodgson, J. G., James, C. D., Sarkaria, J. N., Brennan, C., Kahn, A., Spellman, P. T., Wilson, R. K., Speed, T. P., Gray, J. W., Meyerson, M., Getz, G., Perou, C. M. & Hayes, D. N., Jan 19 2010, In : Cancer Cell. 17, 1, p. 98-110 13 p.

Research output: Contribution to journalArticle

3606 Scopus citations

Linking changes in epithelial morphogenesis to cancer mutations using computational modeling

Rejniak, K. A., Wang, S. E., Bryce, N. S., Chang, H., Parvin, B., Jourquin, J., Estrada, L., Gray, J. W., Arteaga, C. L., Weaver, A. M., Quaranta, V. & Anderson, A. R. A., Aug 1 2010, In : PLoS computational biology. 6, 8, e1000900.

Research output: Contribution to journalArticle

29 Scopus citations

Molecular predictors of 3D morphogenesis by breast cancer cell lines in 3D culture

Han, J., Chang, H., Giricz, O., Lee, G. Y., Baehner, F. L., Gray, J. W., Bissell, M. J., Kenny, P. A. & Parvin, B., Feb 1 2010, In : PLoS computational biology. 6, 2, e1000684.

Research output: Contribution to journalArticle

59 Scopus citations

p27Kip1 mediates addiction of ovarian cancer cells to MYCC (c-MYC) and their dependence on MYC paralogs

Prathapam, T., Aleshin, A., Guan, Y., Gray, J. W. & Martin, G. S., Oct 15 2010, In : Journal of Biological Chemistry. 285, 42, p. 32529-32538 10 p.

Research output: Contribution to journalArticle

8 Scopus citations

Prediction of epigenetically regulated genes in breast cancer cell lines

Loss, L. A., Sadanandam, A., Durinck, S., Nautiyal, S., Flaucher, D., Carlton, V. E. H., Moorhead, M., Lu, Y., Gray, J. W., Faham, M., Spellman, P. & Parvin, B., Jun 4 2010, In : BMC bioinformatics. 11, 305.

Research output: Contribution to journalArticle

29 Scopus citations

Proteomic and transcriptomic profiling reveals a link between the PI3K pathway and lower estrogen-receptor (ER) levels and activity in ER+ breast cancer

Creighton, C. J., Fu, X., Hennessy, B. T., Casa, A. J., Zhang, Y., Gonzalez-Angulo, A. M., Lluch, A., Gray, J. W., Brown, P. H., Hilsenbeck, S. G., Osborne, C. K., Mills, G. B., Lee, A. V. & Schiff, R., Jun 22 2010, In : Breast Cancer Research. 12, 3, R40.

Research output: Contribution to journalArticle

152 Scopus citations

Radiosensitivity profiles from a panel of ovarian cancer cell lines exhibiting genetic alterations in p53 and disparate DNA-dependent protein kinase activities

Langland, G. T., Yannone, S. M., Langland, R. A., Nakao, A., Guan, Y., Long, S. B. T., Vonguyen, L., Chen, D. J., Gray, J. W. & Chen, F., Apr 1 2010, In : Oncology Reports. 23, 4, p. 1021-1026 6 p.

Research output: Contribution to journalArticle

12 Scopus citations

Restriction of receptor movement alters cellular response: Physical force sensing by EphA2

Salaita, K., Nair, P. M., Petit, R. S., Neve, R. M., Das, D., Gray, J. W. & Groves, J. T., Mar 12 2010, In : Science. 327, 5971, p. 1380-1385 6 p.

Research output: Contribution to journalArticle

235 Scopus citations

Sparse multitask regression for identifying common mechanism of response to therapeutic targets

Zhang, K., Gray, J. W. & Parvin, B., Jun 1 2010, In : Bioinformatics. 26, 12, p. i97-i105 btq181.

Research output: Contribution to journalArticle

21 Scopus citations

The expression level of HJURP has an independent prognostic impact and predicts the sensitivity to radiotherapy in breast cancer

Hu, Z., Huang, G., Sadanandam, A., Gu, S., Lenburg, M. E., Pai, M., Bayani, N., Blakely, E. A., Gray, J. W. & Mao, J. H., Mar 8 2010, In : Breast Cancer Research. 12, 2, R18.

Research output: Contribution to journalArticle

73 Scopus citations
2009

A primer on regression methods for decoding cis-regulatory logic

Das, D., Pellegrini, M. & Gray, J. W., Jan 1 2009, In : PLoS computational biology. 5, 1, e1000269.

Research output: Contribution to journalArticle

13 Scopus citations

A systems analysis of the chemosensitivity of breast cancer cells to the polyamine analogue PG-11047

Kuo, W. L., Das, D., Ziyad, S., Bhattacharya, S., Gibb, W. J., Heiser, L. M., Sadanandam, A., Fontenay, G. V., Hu, Z., Wang, N. J., Bayani, N., Feiler, H. S., Neve, R. M., Wyrobek, A. J., Spellman, P. T., Marton, L. J. & Gray, J. W., Dec 14 2009, In : BMC Medicine. 7, 77.

Research output: Contribution to journalArticle

24 Scopus citations

Basal subtype and MAPK/ERK kinase (MEK)-phosphoinositide 3-kinase feedback signaling determine susceptibility of breast cancer cells to MEK inhibition

Mirzoeva, O. K., Das, D., Heiser, L. M., Bhattacharya, S., Siwak, D., Gendelman, R., Bayani, N., Wang, N. J., Neve, R. M., Guan, Y., Hu, Z., Knight, Z., Feiler, H. S., Gascard, P., Parvin, B., Spellman, P. T., Shokat, K. M., Wyrobek, A. J., Bissell, M. J., McCormick, F. & 4 others, Kuo, W. L., Mills, G. B., Gray, J. W. & Korn, W. M., Jan 15 2009, In : Cancer Research. 69, 2, p. 565-572 8 p.

Research output: Contribution to journalArticle

271 Scopus citations

Characterization of a naturally occurring breast cancer subset enriched in epithelial-to-mesenchymal transition and stem cell characteristics

Hennessy, B. T., Gonzalez-Angulo, A. M., Stemke-Hale, K., Gilcrease, M. Z., Krishnamurthy, S., Lee, J. S., Fridlyand, J., Sahin, A., Agarwal, R., Joy, C., Liu, W., Stivers, D., Baggerly, K., Carey, M., Lluch, A., Monteagudo, C., He, X., Weigman, V., Fan, C., Palazzo, J. & 7 others, Hortobagyi, G. N., Nolden, L. K., Wang, N. J., Valero, V., Gray, J. W., Perou, C. M. & Mills, G. B., May 15 2009, In : Cancer Research. 69, 10, p. 4116-4124 9 p.

Research output: Contribution to journalArticle

583 Scopus citations

Comparative analyses of gene copy number and mRNA expression in glioblastoma multiforme tumors and xenografts

Hodgson, J. G., Yeh, R. F., Ray, A., Wang, N. J., Smirnov, I., Yu, M., Hariono, S., Silber, J., Feiler, H. S., Gray, J. W., Spellman, P. T., Vandenberg, S. R., Berger, M. S. & James, C. D., Oct 1 2009, In : Neuro-Oncology. 11, 5, p. 477-487 11 p.

Research output: Contribution to journalArticle

87 Scopus citations

High quality copy number and genotype data from FFPE samples using Molecular Inversion Probe (MIP) microarrays

Wang, Y., Carlton, V. E., Karlin-Neumann, G., Sapolsky, R., Zhang, L., Moorhead, M., Wang, Z. C., Richardson, A. L., Warren, R., Walther, A., Bondy, M., Sahin, A., Krahe, R., Tuna, M., Thompson, P. A., Spellman, P. T., Gray, J. W., Mills, G. B. & Faham, M., Apr 6 2009, In : BMC Medical Genomics. 2, 8.

Research output: Contribution to journalArticle

74 Scopus citations

Immutable functional attributes of histologic grade revealed by context-independent gene expression in primary breast cancer cells

Dairkee, S. H., Sayeed, A., Luciani, G., Champion, S., Zhenhang, M., Jakkula, L. R., Feiler, H. S., Gray, J. W. & Moore, D. H., Oct 1 2009, In : Cancer Research. 69, 19, p. 7826-7834 9 p.

Research output: Contribution to journalArticle

19 Scopus citations

Integrated analysis of breast cancer cell lines reveals unique signaling pathways

Heiser, L. M., Wang, N. J., Talcott, C. L., Laderoute, K. R., Knapp, M., Guan, Y., Hu, Z., Ziyad, S., Weber, B. L., Laquerre, S., Jackson, J. R., Wooster, R. F., Kuo, W., Gray, J. W. & Spellman, P. T., Mar 25 2009, In : Genome biology. 10, 3, R31.

Research output: Contribution to journalArticle

51 Scopus citations

Integrative analysis of cyclin protein levels identifies cyclin B1 as a classifier and predictor of outcomes in breast cancer

Agarwal, R., Gonzalez-Angulo, A. M., Myhre, S., Carey, M., Lee, J. S., Overgaard, J., Alsner, J., Stemke-Hale, K., Lluch, A., Neve, R. M., Kuo, W. L., Sorlie, T., Sahin, A., Valero, V., Keyomarsi, K., Gray, J. W., Borresen-Dale, A. L., Mills, G. B. & Hennessy, B. T., Jun 1 2009, In : Clinical Cancer Research. 15, 11, p. 3654-3662 9 p.

Research output: Contribution to journalArticle

96 Scopus citations

LARG at chromosome 11q23 has functional characteristics of a tumor suppressor in human breast and colorectal cancer

Ong, D. C. T., Ho, Y. M., Rudduck, C., Chin, K., Kuo, W. L., Lie, D. K. H., Chua, C. L. M., Tan, P. H., Eu, K. W., Seow-Choen, F., Wong, C. Y., Hong, G. S., Gray, J. W. & Lee, A. S. G., Nov 1 2009, In : Oncogene. 28, 47, p. 4189-4200 12 p.

Research output: Contribution to journalArticle

17 Scopus citations

Morphometric subtyping for a panel of breast cancer cell lines

Han, J., Chang, H., Fontenay, G., Wang, N. J., Gray, J. W. & Parvin, B., Nov 17 2009, Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009. p. 791-794 4 p. 5193168. (Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Picomolar sensitivity MRI and photoacoustic imaging of cobalt nanoparticles

Bouchard, L. S., Anwar, M. S., Liu, G. L., Hann, B., Xie, Z. H., Gray, J. W., Wang, X., Pines, A. & Chen, F. F., Mar 17 2009, In : Proceedings of the National Academy of Sciences of the United States of America. 106, 11, p. 4085-4089 5 p.

Research output: Contribution to journalArticle

139 Scopus citations

Sparse combinatorial inference with an application in cancer biology

Mukherjee, S., Pelech, S., Neve, R. M., Kuo, W. L., Ziyad, S., Spellman, P. T., Gray, J. W. & Speed, T. P., Jan 1 2009, In : Bioinformatics. 25, 2, p. 265-271 7 p.

Research output: Contribution to journalArticle

16 Scopus citations

Yin Yang 1 modulates taxane response in epithelial ovarian cancer

Matsumura, N., Huang, Z., Baba, T., Lee, P. S., Barnett, J. C., Mori, S., Chang, J. T., Kuo, W. L., Gusberg, A. H., Whitaker, R. S., Gray, J. W., Fujii, S., Berchuck, A. & Murphy, S. K., Feb 1 2009, In : Molecular Cancer Research. 7, 2, p. 210-220 11 p.

Research output: Contribution to journalArticle

43 Scopus citations
2008

A human breast cell model of preinvasive to invasive transition

Rizki, A., Weaver, V. M., Lee, S. Y., Rozenberg, G. I., Chin, K., Myers, C. A., Bascom, J. L., Mott, J. D., Semeiks, J. R., Grate, L. R., Mian, I. S., Borowsky, A. D., Jensen, R. A., Idowu, M. O., Chen, F., Chen, D. J., Petersen, O. W., Gray, J. W. & Bissell, M. J., Mar 1 2008, In : Cancer Research. 68, 5, p. 1378-1387 10 p.

Research output: Contribution to journalArticle

106 Scopus citations

Amplification of 11q13 in ovarian carcinoma

Brown, L. A., Kalloger, S. E., Miller, M. A., Shih, L. M., McKinney, S. E., Santos, J. L., Swenerton, K., Spellman, P. T., Gray, J., Gilks, C. B. & Huntsman, D. G., Jun 1 2008, In : Genes Chromosomes and Cancer. 47, 6, p. 481-489 9 p.

Research output: Contribution to journalArticle

94 Scopus citations

An integrative genomic and proteomic analysis of PIK3CA, PTEN, and AKT mutations in breast cancer

Stemke-Hale, K., Gonzalez-Angulo, A. M., Lluch, A., Neve, R. M., Kuo, W. L., Davies, M., Carey, M., Hu, Z., Guan, Y., Sahin, A., Symmans, W. F., Pusztai, L., Nolden, L. K., Horlings, H., Berns, K., Hung, M. C., Van De Vijver, M. J., Valero, V., Gray, J. W., Bernards, R. & 2 others, Mills, G. B. & Hennessy, B. T., Aug 1 2008, In : Cancer Research. 68, 15, p. 6084-6091 8 p.

Research output: Contribution to journalArticle

665 Scopus citations

A sequence-based survey of the complex structural organization of tumor genomes

Raphael, B. J., Volik, S., Yu, P., Wu, C., Huang, G., Linardopoulou, E. V., Trask, B. J., Waldman, F., Costello, J., Pienta, K. J., Mills, G. B., Bajsarowicz, K., Kobayashi, Y., Sridharan, S., Paris, P. L., Tao, Q., Aerni, S. J., Brown, R. P., Bashir, A., Gray, J. W. & 6 others, Cheng, J. F., de Jong, P., Nefedov, M., Ried, T., Padilla-Nash, H. M. & Collins, C. C., Mar 25 2008, In : Genome biology. 9, 3, R59.

Research output: Contribution to journalArticle

31 Scopus citations

Cancer Genomics

Spellman, P. T., Costello, J. F. & Gray, J. W., Dec 1 2008, The Molecular Basis of Cancer. Elsevier Inc., p. 267-282 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Comprehensive genomic characterization defines human glioblastoma genes and core pathways

McLendon, R., Friedman, A., Bigner, D., Van Meir, E. G., Brat, D. J., Mastrogianakis, G. M., Olson, J. J., Mikkelsen, T., Lehman, N., Aldape, K., Yung, W. K. A., Bogler, O., Weinstein, J. N., VandenBerg, S., Berger, M., Prados, M., Muzny, D., Morgan, M., Scherer, S., Sabo, A. & 211 others, Nazareth, L., Lewis, L., Hall, O., Zhu, Y., Ren, Y., Alvi, O., Yao, J., Hawes, A., Jhangiani, S., Fowler, G., San Lucas, A., Kovar, C., Cree, A., Dinh, H., Santibanez, J., Joshi, V., Gonzalez-Garay, M. L., Miller, C. A., Milosavljevic, A., Donehower, L., Wheeler, D. A., Gibbs, R. A., Cibulskis, K., Sougnez, C., Fennell, T., Mahan, S., Wilkinson, J., Ziaugra, L., Onofrio, R., Bloom, T., Nicol, R., Ardlie, K., Baldwin, J., Gabriel, S., Lander, E. S., Ding, L., Fulton, R. S., McLellan, M. D., Wallis, J., Larson, D. E., Shi, X., Abbott, R., Fulton, L., Chen, K., Koboldt, D. C., Wendl, M. C., Meyer, R., Tang, Y., Lin, L., Osborne, J. R., Dunford-Shore, B. H., Miner, T. L., Delehaunty, K., Markovic, C., Swift, G., Courtney, W., Pohl, C., Abbott, S., Hawkins, A., Leong, S., Haipek, C., Schmidt, H., Wiechert, M., Vickery, T., Scott, S., Dooling, D. J., Chinwalla, A., Weinstock, G. M., Mardis, E. R., Wilson, R. K., Getz, G., Winckler, W., Verhaak, R. G. W., Lawrence, M. S., O'Kelly, M., Robinson, J., Alexe, G., Beroukhim, R., Carter, S., Chiang, D., Gould, J., Gupta, S., Korn, J., Mermel, C., Mesirov, J., Monti, S., Nguyen, H., Parkin, M., Reich, M., Stransky, N., Weir, B. A., Garraway, L., Golub, T., Meyerson, M., Chin, L., Protopopov, A., Zhang, J., Perna, I., Aronson, S., Sathiamoorthy, N., Ren, G., Yao, J., Wiedemeyer, W. R., Kim, H., Sek, W. K., Xiao, Y., Kohane, I. S., Seidman, J., Park, P. J., Kucherlapati, R., Laird, P. W., Cope, L., Herman, J. G., Weisenberger, D. J., Pan, F., Van Den Berg, D., Van Neste, L., Joo, M. Y., Schuebel, K. E., Baylin, S. B., Absher, D. M., Li, J. Z., Southwick, A., Brady, S., Aggarwal, A., Chung, T., Sherlock, G., Brooks, J. D., Myers, R. M., Spellman, P. T., Purdom, E., Jakkula, L. R., Lapuk, A. V., Marr, H., Dorton, S., Yoon, G. C., Han, J., Ray, A., Wang, V., Durinck, S., Robinson, M., Wang, N. J., Vranizan, K., Peng, V., Van Name, E., Fontenay, G. V., Ngai, J., Conboy, J. G., Parvin, B., Feiler, H. S., Speed, T. P., Gray, J. W., Brennan, C., Socci, N. D., Olshen, A., Taylor, B. S., Lash, A., Schultz, N., Reva, B., Antipin, Y., Stukalov, A., Gross, B., Cerami, E., Wei, Q. W., Qin, L. X., Seshan, V. E., Villafania, L., Cavatore, M., Borsu, L., Viale, A., Gerald, W., Sander, C., Ladanyi, M., Perou, C. M., Hayes, D. N., Topal, M. D., Hoadley, K. A., Qi, Y., Balu, S., Shi, Y., Wu, J., Penny, R., Bittner, M., Shelton, T., Lenkiewicz, E., Morris, S., Beasley, D., Sanders, S., Kahn, A., Sfeir, R., Chen, J., Nassau, D., Feng, L., Hickey, E., Barker, A., Gerhard, D. S., Vockley, J., Compton, C., Vaught, J., Fielding, P., Ferguson, M. L., Schaefer, C., Zhang, J., Madhavan, S., Buetow, K. H., Collins, F., Good, P., Guyer, M., Ozenberger, B., Peterson, J. & Thomson, E., Oct 23 2008, In : Nature. 455, 7216, p. 1061-1068 8 p.

Research output: Contribution to journalArticle

4641 Scopus citations

Dicer, Drosha, and outcomes in patients with ovarian cancer

Merritt, W. M., Lin, Y. G., Han, L. Y., Kamat, A. A., Spannuth, W. A., Schmandt, R., Urbauer, D., Pennacchio, L. A., Cheng, J. F., Nick, A. M., Deavers, M. T., Mourad-Zeidan, A., Wang, H., Mueller, P., Lenburg, M. E., Gray, J. W., Mok, S., Birrer, M. J., Lopez-Berestein, G., Coleman, R. L. & 2 others, Bar-Eli, M. & Sood, A. K., Dec 18 2008, In : New England Journal of Medicine. 359, 25, p. 2641-2650 10 p.

Research output: Contribution to journalArticle

528 Scopus citations

ESR1 gene amplification in breast cancer: A common phenomenon? [1]

Brown, L. A., Hoog, J., Chin, S. F., Tao, Y., Zayed, A. A., Chin, K., Teschendorff, A. E., Quackenbush, J. F., Marioni, J. C., Leung, S., Perou, C. M., Neilsen, T. O., Ellis, M., Gray, J. W., Bernard, P. S., Huntsman, D. G. & Caldas, C., Jul 1 2008, In : Nature genetics. 40, 7, p. 806-807 2 p.

Research output: Contribution to journalLetter

48 Scopus citations

Ovarian cancer: Linking genomics to new target discovery and molecular markers - The way ahead

Hennessy, B. T., Murph, M., Nanjundan, M., Carey, M., Auersperg, N., Almeida, J., Coombes, K. R., Liu, J., Lu, Y., Gray, J. W. & Mills, G. B., Dec 1 2008, Hormonal Carcinogenesis V. Li, J., Li, S., Mohla, S., Rochefort, H., Rochefort, H. & Maudelonde, T. (eds.). p. 23-40 18 p. (Advances in Experimental Medicine and Biology; vol. 617).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

10 Scopus citations

Ovarian carcinomas with genetic and epigenetic BRCA1 loss have distinct molecular abnormalities

Press, J. Z., De Luca, A., Boyd, N., Young, S., Troussard, A., Ridge, Y., Kaurah, P., Kalloger, S. E., Blood, K. A., Smith, M., Spellman, P. T., Wang, Y., Miller, D. M., Horsman, D., Faham, M., Gilks, C. B., Gray, J. & Huntsman, D. G., Jan 22 2008, In : BMC cancer. 8, 17.

Research output: Contribution to journalArticle

222 Scopus citations

Overexpression of SnoN/SkiL, amplified at the 3q26.2 locus, in ovarian cancers: A role in ovarian pathogenesis

Nanjundan, M., Cheng, K. W., Zhang, F., Lahad, J., Kuo, W. L., Schmandt, R., Smith-McCune, K., Fishman, D., Gray, J. W. & Mills, G. B., Aug 1 2008, In : Molecular Oncology. 2, 2, p. 164-181 18 p.

Research output: Contribution to journalArticle

22 Scopus citations

Preface

Mendelsohn, J., Howley, P. M., Israel, M. A., Gray, J. W. & Thompson, C. B., Dec 1 2008, The Molecular Basis of Cancer. Elsevier Inc., p. xv-xvi

Research output: Chapter in Book/Report/Conference proceedingForeword/postscript

1 Scopus citations

Risk estimation of distant metastasis in node-negative, estrogen receptor-positive breast cancer patients using an RT-PCR based prognostic expression signature

Tutt, A., Wang, A., Rowland, C., Gillett, C., Lau, K., Chew, K., Dai, H., Kwok, S., Ryder, K., Shu, H., Springall, R., Cane, P., McCallie, B., Kam-Morgan, L., Anderson, S., Buerger, H., Gray, J., Bennington, J., Esserman, L., Hastie, T. & 4 others, Broder, S., Sninsky, J., Brandt, B. & Waldman, F., Nov 21 2008, In : BMC cancer. 8, 339.

Research output: Contribution to journalArticle

42 Scopus citations