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2020

Achieving health equity in preventive services: A systematic review for a national institutes of health pathways to prevention workshop

Nelson, H. D., Cantor, A., Wagner, J., Jungbauer, R., Quiñones, A., Stillman, L. & Kondo, K., Feb 18 2020, In : Annals of internal medicine. 172, 4, p. 258-271 14 p.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations
Open Access

Circulating myeloid cells invade the central nervous system to mediate cachexia during pancreatic cancer

Burfeind, K. G., Zhu, X., Norgard, M. A., Levasseur, P. R., Huisman, C., Buenafe, A. C., Olson, B., Michaelis, K. A., Torres, E. R. S., Jeng, S., McWeeney, S., Raber, J. & Marks, D. L., May 2020, In : eLife. 9, p. 1-27 27 p., e54095.

Research output: Contribution to journalArticle

Open Access

Complex Genetic Architecture Underlies Regulation of Influenza-A-Virus-Specific Antibody Responses in the Collaborative Cross

Noll, K. E., Whitmore, A. C., West, A., McCarthy, M. K., Morrison, C. R., Plante, K. S., Hampton, B. K., Kollmus, H., Pilzner, C., Leist, S. R., Gralinski, L. E., Menachery, V. D., Schäfer, A., Miller, D., Shaw, G., Mooney, M., McWeeney, S., Pardo-Manuel de Villena, F., Schughart, K., Morrison, T. E. & 3 others, Baric, R. S., Ferris, M. T. & Heise, M. T., Apr 28 2020, In : Cell Reports. 31, 4, 107587.

Research output: Contribution to journalArticle

Open Access

Detecting rare diseases in electronic health records using machine learning and knowledge engineering: Case study of acute hepatic porphyria

Cohen, A. M., Chamberlin, S., Deloughery, T., Nguyen, M., Bedrick, S., Meninger, S., Ko, J. J., Amin, J. J., Wei, A. J. & Hersh, W., 2020, In : PloS one. 15, 7, p. e0235574

Research output: Contribution to journalArticle

Open Access

Development of the PTSD-Repository: A Publicly Available Repository of Randomized Controlled Trials for Posttraumatic Stress Disorder

O'Neil, M. E., Harik, J. M., McDonagh, M., Cheney, T. P., Hsu, F. C., Cameron, D. C., Carlson, K. F., Norman, S. B. & Hamblen, J. L., 2020, (Accepted/In press) In : Journal of Traumatic Stress.

Research output: Contribution to journalArticle

Discovery and characterization of targetable NTRK point mutations in hematologic neoplasms

Joshi, S. K., Qian, K., Bisson, W. H., Watanabe-Smith, K., Huang, A., Bottomly, D., Traer, E., Tyner, J. W., McWeeney, S. K., Davare, M. A., Druker, B. J. & Tognon, C. E., Jun 11 2020, In : Blood. 135, 24, p. 2159-2170 12 p.

Research output: Contribution to journalArticle

Electronic Health Records in Ophthalmology: Source and Method of Documentation

Henriksen, B. S., Goldstein, I. H., Rule, A., Huang, A. E., Dusek, H., Igelman, A., Chiang, M. F. & Hribar, M. R., Mar 2020, In : American journal of ophthalmology. 211, p. 191-199 9 p.

Research output: Contribution to journalArticle

ERBB2/HER2 mutations are transforming and therapeutically targetable in leukemia

Joshi, S. K., Keck, J. M., Eide, C. A., Bottomly, D., Traer, E., Tyner, J. W., McWeeney, S., Tognon, C. E. & Druker, B. J., Jan 1 2020, (Accepted/In press) In : Leukemia.

Research output: Contribution to journalArticle

Open Access

Identifying main finding sentences in clinical case reports

Luo, M., Cohen, A. M., Addepalli, S. & Smalheiser, N. R., Jan 1 2020, In : Database : the journal of biological databases and curation. 2020

Research output: Contribution to journalArticle

Open Access

Immune Predictors of Mortality after Ribonucleic Acid Virus Infection

Graham, J. B., Swarts, J. L., Menachery, V. D., Gralinski, L. E., Schäfer, A., Plante, K. S., Morrison, C. R., Voss, K. M., Green, R., Choonoo, G., Jeng, S., Miller, D. R., Mooney, M. A., McWeeney, S. K., Ferris, M. T., De Villena, F. P. M., Gale, M., Heise, M. T., Baric, R. S. & Lund, J. M., Mar 15 2020, In : Journal of Infectious Diseases. 221, 6, p. 882-889 8 p.

Research output: Contribution to journalArticle

In Vivo Repair of a Protein Underlying a Neurological Disorder by Programmable RNA Editing

Sinnamon, J. R., Kim, S. Y., Fisk, J. R., Song, Z., Nakai, H., Jeng, S., McWeeney, S. & Mandel, G., Jul 14 2020, In : Cell Reports. 32, 2, 107878.

Research output: Contribution to journalArticle

Open Access

Kinetic Analysis of Lesions Identified on a Rapid Abridged Multiphase (RAMP) Breast MRI Protocol

Choudhery, S., Chou, S. H. S., Chang, K., Kalpathy-Cramer, J. & Lehman, C. D., May 2020, In : Academic radiology. 27, 5, p. 672-681 10 p.

Research output: Contribution to journalArticle

1 Scopus citations

Promoting Quality Face-to-Face Communication during Ophthalmology Encounters in the Electronic Health Record Era

Baxter, S. L., Gali, H. E., Chiang, M. F., Hribar, M. R., Ohno-Machado, L., El-Kareh, R., Huang, A. E., Chen, H. E., Camp, A. S., Kikkawa, D. O., Korn, B. S., Lee, J. E., Longhurst, C. A. & Millen, M., Jan 1 2020, In : Applied Clinical Informatics. 11, 1, p. 130-141 12 p.

Research output: Contribution to journalArticle

Redundancy of Progress Notes for Serial Office Visits

Hribar, M. R., Rule, A., Huang, A. E., Dusek, H., Goldstein, I. H., Henriksen, B., Lin, W. C., Igelman, A. & Chiang, M. F., Jan 2020, In : Ophthalmology. 127, 1, p. 134-135 2 p.

Research output: Contribution to journalArticle

1 Scopus citations

REPRINT OF: Current Methods of the U.S. Preventive Services Task Force: A Review of the Process

for the Methods Work Group, Third U.S. Preventive Services Task Force, Mar 2020, In : American journal of preventive medicine. 58, 3, p. 316-331 16 p.

Research output: Contribution to journalArticle

Reversible suppression of T cell function in the bone marrow microenvironment of acute myeloid leukemia

Lamble, A. J., Kosaka, Y., Laderas, T., Maffit, A., Kaempf, A., Brady, L. K., Wang, W., Long, N., Saultz, J. N., Mori, M., Soong, D., LeFave, C. V., Huang, F., Adams, H., Loriaux, M. M., Loriaux, M. M., Tognon, C. E., Lo, P., Tyner, J. W., Tyner, J. W. & 8 others, Fan, G., McWeeney, S. K., Druker, B. J., Druker, B. J., Druker, B. J., Lind, E. F., Lind, E. F. & Lind, E. F., Jun 23 2020, In : Proceedings of the National Academy of Sciences of the United States of America. 117, 25, p. 14331-14341 11 p.

Research output: Contribution to journalArticle

Open Access

TREC-COVID: Rationale and Structure of an Information Retrieval Shared Task for COVID-19

Roberts, K., Alam, T., Bedrick, S., Demner-Fushman, D., Lo, K., Soboroff, I., Voorhees, E., Wang, L. L. & Hersh, W. R., May 4 2020, (Accepted/In press) In : Journal of the American Medical Informatics Association : JAMIA.

Research output: Contribution to journalArticle

Open Access

Unmet information needs of clinical teams delivering care to complex patients and design strategies to address those needs

Cohen, D. J., Wyte-Lake, T., Dorr, D. A., Gold, R., Holden, R. J., Koopman, R. J., Colasurdo, J. & Warren, N., May 1 2020, In : Journal of the American Medical Informatics Association. 27, 5, p. 690-699 10 p.

Research output: Contribution to journalArticle

1 Scopus citations

Use of an Online Breast Cancer Risk Assessment and Patient Decision Aid in Primary Care Practices

Eden, K. B., Ivlev, I., Bensching, K. L., Franta, G., Hersh, A. R., Case, J., Fu, R. & Nelson, H. D., Jun 1 2020, In : Journal of Women's Health. 29, 6, p. 763-769 7 p.

Research output: Contribution to journalArticle

1 Scopus citations
2019

Acute myeloid leukemia–induced T-cell suppression can be reversed by inhibition of the MAPK pathway

Moshofsky, K. B., Cho, H. J., Wu, G., Romine, K. A., Newman, M. T., Kosaka, Y., McWeeney, S. K. & Lind, E. F., Oct 22 2019, In : Blood Advances. 3, 20, p. 3038-3051 14 p.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

An interactive virtual reality tour for adolescents receiving proton radiation therapy: Proof-of-concept study

Galvez, J., Eisenhower, M., England, W., Wartman, E., Simpao, A., Rehman, M., Lustig, R. & Hribar, M., Mar 1 2019, In : Journal of medical Internet research. 21, 3, e11259.

Research output: Contribution to journalArticle

Open Access

A Quantitative Severity Scale for Retinopathy of Prematurity Using Deep Learning to Monitor Disease Regression after Treatment

Gupta, K., Campbell, J. P., Taylor, S., Brown, J. M., Ostmo, S., Chan, R. V. P., Dy, J., Erdogmus, D., Ioannidis, S., Kalpathy-Cramer, J., Kim, S. J. & Chiang, M. F., Sep 2019, In : JAMA ophthalmology. 137, 9, p. 1029-1036 8 p.

Research output: Contribution to journalArticle

9 Scopus citations

A randomized trial of external practice support to improve cardiovascular risk factors in primary care

Parchman, M. L., Anderson, M. L., Dorr, D. A., Fagnan, L. J., O’meara, E. S., Tuzzio, L., Penfold, R. B., Cook, A. J., Hummel, J., Conway, C., Cholan, R. & Baldwin, L. M., Aug 2019, In : Annals of family medicine. 17, p. S40-S49

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

A roadmap for foundational research on artificial intelligence in medical imaging: From the 2018 NIH/RSNA/ACR/The Academy workshop

Langlotz, C. P., Allen, B., Erickson, B. J., Kalpathy-Cramer, J., Bigelow, K., Cook, T. S., Flanders, A. E., Lungren, M. P., Mendelson, D. S., Rudie, J. D., Wang, G. & Kandarpa, K., 2019, In : RADIOLOGY. 291, 3, p. 781-791 11 p.

Research output: Contribution to journalArticle

Open Access
34 Scopus citations

A Sociotechnical Multiple Perspectives Approach to the Use of Medical Scribes: A Deeper Dive into the Scribe-Provider Interaction

Corby, S., Gold, J. A., Mohan, V., Solberg, N., Becton, J., Bergstrom, R., Orwoll, B., Hoekstra, C. & Ash, J. S., 2019, In : AMIA ... Annual Symposium proceedings. AMIA Symposium. 2019, p. 333-342 10 p.

Research output: Contribution to journalArticle

Changes in Electronic Health Record Use Time and Documentation over the Course of a Decade

Goldstein, I. H., Hwang, T., Gowrisankaran, S., Bales, R., Chiang, M. F. & Hribar, M. R., Jun 2019, In : Ophthalmology. 126, 6, p. 783-791 9 p.

Research output: Contribution to journalArticle

4 Scopus citations

Classification and comparison via neural networks

Yıldız, İ., Tian, P., Dy, J., Erdoğmuş, D., Brown, J., Kalpathy-Cramer, J., Ostmo, S., Peter Campbell, J., Chiang, M. F. & Ioannidis, S., Oct 2019, In : Neural Networks. 118, p. 65-80 16 p.

Research output: Contribution to journalArticle

3 Scopus citations

Clinical resistance to crenolanib in acute myeloid leukemia due to diverse molecular mechanisms

Zhang, H., Savage, S., Schultz, A. R., Bottomly, D., White, L., Segerdell, E., Wilmot, B., McWeeney, S. K., Eide, C. A., Nechiporuk, T., Carlos, A., Henson, R., Lin, C., Searles, R., Ho, H., Lam, Y. L., Sweat, R., Follit, C., Jain, V., Lind, E. & 10 others, Borthakur, G., Garcia-Manero, G., Ravandi, F., Kantarjian, H. M., Cortes, J., Collins, R., Buelow, D. R., Baker, S. D., Druker, B. J. & Tyner, J. W., Dec 1 2019, In : Nature communications. 10, 1, 244.

Research output: Contribution to journalArticle

20 Scopus citations

Comparative effectiveness and harms of long-acting insulins for type 1 and type 2 diabetes: A systematic review and meta-analysis

Holmes, R. S., Crabtree, E. & McDonagh, M., Jan 1 2019, (Accepted/In press) In : Diabetes, Obesity and Metabolism.

Research output: Contribution to journalArticle

2 Scopus citations

Controlling for contaminants in low-biomass 16S rRNA gene sequencing experiments

Karstens, L., Asquith, M., Davin, S., Fair, D., Gregory, W. T., Wolfe, A. J., Braun, J. & McWeeney, S., Jul 2019, In : mSystems. 4, 4, e00290-19.

Research output: Contribution to journalArticle

Open Access
15 Scopus citations

Coordinating Care Across VA Providers and Settings: Policy and Research Recommendations from VA’s State of the Art Conference

Cordasco, K. M., Frayne, S. M., Kansagara, D., Zulman, D. M., Asch, S. M., Burke, R. E., Post, E. P., Fihn, S. D., Klobucar, T., Meyer, L. J., Kirsh, S. R. & Atkins, D., May 15 2019, In : Journal of general internal medicine. 34, p. 11-17 7 p.

Research output: Contribution to journalArticle

2 Scopus citations

CSF1R inhibitors exhibit antitumor activity in acute myeloid leukemia by blocking paracrine signals from support cells

Edwards, D. K., Watanabe-Smith, K., Rofelty, A., Damnernsawad, A., Laderas, T., Lamble, A., Lind, E. F., Kaempf, A., Mori, M., Rosenberg, M., d’Almeida, A., Long, N., Agarwal, A., Sweeney, D. T., Loriaux, M., McWeeney, S. K. & Tyner, J. W., Feb 7 2019, In : Blood. 133, 6, p. 588-599 12 p.

Research output: Contribution to journalArticle

17 Scopus citations

Data Omission by Physician Trainees on ICU Rounds

Artis, K. A., Bordley, J., Mohan, V. & Gold, J. J., Mar 1 2019, In : Critical care medicine. 47, 3, p. 403-409 7 p.

Research output: Contribution to journalArticle

2 Scopus citations

Depression in children and adolescents: Evaluation and treatment

Selph, S. S. & McDonagh, M. S., Nov 15 2019, In : American family physician. 100, 10, p. 609-617 9 p.

Research output: Contribution to journalArticle

1 Scopus citations

Disruption of intestinal homeostasis and intestinal microbiota during experimental autoimmune uveitis

Janowitz, C., Nakamura, Y. K., Metea, C., Gligor, A., Yu, W., Karstens, L., Rosenbaum, J. T., Asquith, M. & Lin, P., Jan 2019, In : Investigative Ophthalmology and Visual Science. 60, 1, p. 420-429 10 p.

Research output: Contribution to journalArticle

7 Scopus citations

Essential activities for electronic health record safety: A qualitative study

Ash, J., Singh, H., Wright, A., Chase, D. & Sittig, D. F., Jan 1 2019, In : Health Informatics Journal.

Research output: Contribution to journalArticle

2 Scopus citations

Evaluation of a deep learning image assessment system for detecting severe retinopathy of prematurity

for the Imaging and Informatics In Retinopathy Of Prematurity (i-ROP) Research Consortium, May 1 2019, In : British Journal of Ophthalmology. 103, 5, p. 580-584 5 p.

Research output: Contribution to journalArticle

17 Scopus citations

Evaluation of Simulated Lesions as Surrogates to Clinical Lesions for Thoracic CT Volumetry: The Results of an International Challenge

Robins, M., Kalpathy-Cramer, J., Obuchowski, N. A., Buckler, A., Athelogou, M., Jarecha, R., Petrick, N., Pezeshk, A., Sahiner, B. & Samei, E., Jul 2019, In : Academic radiology. 26, 7, p. e161-e173

Research output: Contribution to journalArticle

2 Scopus citations

Frequency of Passive EHR Alerts in the ICU: Another Form of Alert Fatigue?

Kizzier-Carnahan, V., Artis, K. A., Mohan, V. & Gold, J. A., Sep 1 2019, In : Journal of patient safety. 15, 3, p. 246-250 5 p.

Research output: Contribution to journalArticle

8 Scopus citations

Genomic landscape of neutrophilic leukemias of ambiguous diagnosis

Zhang, H., Wilmot, B., Bottomly, D., Dao, K-H., Stevens, E., Eide, C. A., Khanna, V., Rofelty, A., Savage, S., Schultz, A. R., Long, N., White, L., Carlos, A., Henson, R., Lin, C., Searles, R., Collins, R. H., DeAngelo, D. J., Deininger, M. W., Dunn, T. & 12 others, Hein, T., Luskin, M. R., Medeiros, B. C., Oh, S. T., Pollyea, D. A., Steensma, D. P., Stone, R. M., Druker, B., McWeeney, S., Maxson, J. E., Gotlib, J. R. & Tyner, J., Sep 12 2019, In : Blood. 134, 11, p. 867-879 13 p.

Research output: Contribution to journalArticle

7 Scopus citations

Geographical disparity and traumatic brain injury in America: Rural areas suffer poorer outcomes

Brown, J. B., Kheng, M., Carney, N. A., Rubiano, A. M. & Puyana, J. C., Jan 1 2019, In : Journal of Neurosciences in Rural Practice. 10, 1, p. 10-15 6 p.

Research output: Contribution to journalArticle

2 Scopus citations
16 Scopus citations

Guidelines for the management of pediatric severe traumatic brain injury, third edition: Update of the brain trauma foundation guidelines

Kochanek, P. M., Tasker, R. C., Carney, N., Totten, A. M., Adelson, P. D., Selden, N. R., Davis-O'Reilly, C., Hart, E. L., Bell, M. J., Bratton, S. L., Grant, G. A., Kissoon, N., Reuter-Rice, K. E., Vavilala, M. S. & Wainwright, M. S., Mar 1 2019, In : Pediatric Critical Care Medicine. 20, 3, p. S1-S82

Research output: Contribution to journalArticle

29 Scopus citations

Guidelines for the Management of Pediatric Severe Traumatic Brain Injury, Third Edition: Update of the Brain Trauma Foundation Guidelines, Executive Summary

Kochanek, P. M., Tasker, R. C., Carney, N., Totten, A. M., Adelson, P. D., Selden, N. R., Davis-O'Reilly, C., Hart, E. L., Bell, M. J., Bratton, S. L., Grant, G. A., Kissoon, N., Reuter-Rice, K. E., Vavilala, M. S. & Wainwright, M. S., Jun 1 2019, In : Clinical neurosurgery. 84, 6, p. 1169-1178 10 p., nyz051.

Research output: Contribution to journalArticle

15 Scopus citations

Guidelines for the Management of Pediatric Severe Traumatic Brain Injury, Third Edition: Update of the Brain Trauma Foundation Guidelines, Executive Summary

Kochanek, P. M., Tasker, R. C., Carney, N., Totten, A. M., Adelson, P. D., Selden, N. R., Davis-O'reilly, C., Hart, E. L., Bell, M. J., Bratton, S. L., Grant, G. A., Kissoon, N., Reuter-Rice, K. E., Vavilala, M. S. & Wainwright, M. S., Mar 1 2019, In : Pediatric Critical Care Medicine. 20, 3, p. 280-289 10 p.

Research output: Contribution to journalArticle

27 Scopus citations

Health care utilization and mental health diagnoses among veterans with tinnitus

Carlson, K. F., Gilbert, T. A., O’neil, M. E., Zaugg, T. L., Manning, C. A., Kaelin, C., Thielman, E. J., Reavis, K. M. & Henry, J. A., Apr 2019, In : American journal of audiology. 28, 1S, p. 181-190 10 p.

Research output: Contribution to journalArticle

4 Scopus citations

HLA Alleles Associated With Risk of Ankylosing Spondylitis and Rheumatoid Arthritis Influence the Gut Microbiome

Asquith, M., Sternes, P. R., Costello, M. E., Karstens, L., Diamond, S., Martin, T. M., Li, Z., Marshall, M. S., Spector, T. D., le Cao, K. A., Rosenbaum, J. T. & Brown, M. A., Oct 1 2019, In : Arthritis and Rheumatology. 71, 10, p. 1642-1650 9 p.

Research output: Contribution to journalArticle

15 Scopus citations

Illuminating biological pathways for drug targeting in head and neck squamous cell carcinoma

Choonoo, G., Blucher, A. S., Higgins, S., Boardman, M., Jeng, S., Zheng, C., Jacobs, J., Anderson, A., Chamberlin, S., Evans, N., Vigoda, M., Cordier, B., Tyner, J. W., Kulesz-Martin, M., McWeeney, S. K. & Laderas, T., 2019, In : PloS one. 14, 10, e0223639.

Research output: Contribution to journalArticle

Open Access

Implementing risk stratification in primary care: Challenges and strategies

Wagner, J., Hall, J. D., Ross, R. L., Cameron, D., Sachdeva, B., Kansagara, D., Cohen, D. J. & Dorr, D. A., Jan 1 2019, In : Journal of the American Board of Family Medicine. 32, 4, p. 585-595 11 p.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations