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2020

Environmental and behavioral controls on juvenile Chinook salmon migration pathways in the Columbia River estuary

Morrice, K. J., Baptista, A. M. & Burke, B. J., Jul 1 2020, In : Ecological Modelling. 427, 109003.

Research output: Contribution to journalArticle

Open Access
2019

A comparative study of carbon supports for Pd/Au nanoparticle-based catalysts

Meduri, K., Rahimian, A., Humbert, R. A., Johnson, G. O. B., Tratnyek, P. & Jiao, J., May 10 2019, In : Materials Performance and Characterization. 8, 3

Research output: Contribution to journalArticle

Activation of Dioxygen by a Mononuclear Nonheme Iron Complex: Sequential Peroxo, Oxo, and Hydroxo Intermediates

Gordon, J. B., Vilbert, A. C., Dimucci, I. M., MacMillan, S. N., Lancaster, K. M., Moënne-Loccoz, P. & Goldberg, D. P., Jan 1 2019, In : Journal of the American Chemical Society. 141, 44, p. 17533-17547 15 p.

Research output: Contribution to journalArticle

2 Scopus citations

A Nonheme Thiolate-Ligated Cobalt Superoxo Complex: Synthesis and Spectroscopic Characterization, Computational Studies, and Hydrogen Atom Abstraction Reactivity

Gordon, J. B., Vilbert, A. C., Siegler, M. A., Lancaster, K. M., Moenne-Loccoz, P. & Goldberg, D. P., Feb 27 2019, In : Journal of the American Chemical Society. 141, 8, p. 3641-3653 13 p.

Research output: Contribution to journalArticle

7 Scopus citations

A rock-boring and rock-ingesting freshwater bivalve (shipworm) from the Philippines

Reuben Shipway, J., Altamia, M. A., Rosenberg, G., Concepcion, G. P., Haygood, M. G. & Distel, D. L., Jun 26 2019, In : Proceedings of the Royal Society B: Biological Sciences. 286, 1905, 20190434.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Biogenic and Synthetic MnO 2 Nanoparticles: Size and Growth Probed with Absorption and Raman Spectroscopies and Dynamic Light Scattering

Soldatova, A. V., Balakrishnan, G., Oyerinde, O. F., Romano, C. A., Tebo, B. & Spiro, T. G., Apr 16 2019, In : Environmental Science and Technology. 53, 8, p. 4185-4197 13 p.

Research output: Contribution to journalArticle

5 Scopus citations

Concentrations of reactive Mn(III)-L and MnO2 in estuarine and marine waters determined using spectrophotometry and the leuco base, leucoberbelin blue

Jones, M. R., Luther, G. W., Mucci, A. & Tebo, B. M., Aug 1 2019, In : Talanta. 200, p. 91-99 9 p.

Research output: Contribution to journalArticle

2 Scopus citations

Cryogenic soil coring reveals coexistence of aerobic and anaerobic vinyl chloride degrading bacteria in a chlorinated ethene contaminated aquifer

Richards, P. M., Liang, Y., Johnson, R. L. & Mattes, T. E., Jun 15 2019, In : Water Research. 157, p. 281-291 11 p.

Research output: Contribution to journalArticle

4 Scopus citations
2 Scopus citations

Distribution of desferrioxamine-B-extractable soluble manganese(III) and particulate MnO2 in the St. Lawrence Estuary, Canada

Jones, M. R., Oldham, V. E., Luther, G. W., Mucci, A. & Tebo, B., Jan 20 2019, In : Marine Chemistry. 208, p. 70-82 13 p.

Research output: Contribution to journalArticle

2 Scopus citations

Effects of Sulfidation and Nitrate on the Reduction of N-Nitrosodimethylamine by Zerovalent Iron

Qin, H., Guan, X. & Tratnyek, P. G., Aug 20 2019, In : Environmental Science and Technology. 53, 16, p. 9744-9754 11 p.

Research output: Contribution to journalArticle

4 Scopus citations

Electrochemical Characterization of Magnetite with Agarose-Stabilized Powder Disk Electrodes and Potentiometric Methods

Bradley, M. J. & Tratnyek, P. G., May 16 2019, In : ACS Earth and Space Chemistry. 3, 5, p. 688-699 12 p.

Research output: Contribution to journalArticle

Open Access

Electrochemical characterization of natural organic matter by direct voltammetry in an aprotic solvent

Pavitt, A. S. & Tratnyek, P. G., Oct 2019, In : Environmental Science: Processes and Impacts. 21, 10, p. 1664-1683 20 p.

Research output: Contribution to journalArticle

Open Access

Enhanced Photooxidation of Hydroquinone by Acetylacetone, a Novel Photosensitizer and Electron Shuttle

Jin, J., Zhang, S., Wu, B., Chen, Z., Zhang, G. & Tratnyek, P. G., Oct 1 2019, In : Environmental Science and Technology. 53, 19, p. 11232-11239 8 p.

Research output: Contribution to journalArticle

1 Scopus citations

Genomic Signatures for Sedimentary Microbial Utilization of Phytoplankton Detritus in a Fast-Flowing Estuary

Smith, M. W., Herfort, L., Rivers, A. R. & Simon, H. M., Nov 5 2019, In : Frontiers in Microbiology. 10, 2475.

Research output: Contribution to journalArticle

Open Access

Incorporation of Ni2+, Co2+, and Selenocysteine into the Auxiliary Fe-S Cluster of the Radical SAM Enzyme HydG

Rao, G., Alwan, K. B., Blackburn, N. J. & Britt, R. D., Oct 7 2019, In : Inorganic Chemistry. 58, 19, p. 12601-12608 8 p.

Research output: Contribution to journalArticle

Methane Dynamics Associated with Tidal Processes in the Lower Columbia River

Pfeiffer-Herbert, A. S., Prahl, F. G., Peterson, T. D. & Wolhowe, M., Jul 15 2019, In : Estuaries and Coasts. 42, 5, p. 1249-1264 16 p.

Research output: Contribution to journalArticle

Mononuclear, nonheme, high-spin {FeNO}7/8 complexes supported by a sterically encumbered N4S-T.

Confer, A. M., Sabuncu, S., Siegler, M. A., Moenne-Loccoz, P. & Goldberg, D. P., Aug 5 2019, In : Inorganic Chemistry. 58, 15, p. 9576-9580 5 p.

Research output: Contribution to journalArticle

Overlooked Role of Peroxides as Free Radical Precursors in Advanced Oxidation Processes

Chen, Z., Li, X., Zhang, S., Jin, J., Song, X., Wang, X. & Tratnyek, P. G., Jan 1 2019, In : Environmental Science and Technology.

Research output: Contribution to journalArticle

4 Scopus citations

PH-Induced Binding of the Axial Ligand in an Engineered CuA Site Favors the πu State

Morgada, M. N., Emiliani, F., Chacón, K. N., Álvarez-Paggi, D., Murgida, D. H., Blackburn, N. J., Abriata, L. A. & Vila, A. J., Jan 1 2019, (Accepted/In press) In : Inorganic Chemistry.

Research output: Contribution to journalArticle

Quantifying increased groundwater demand from prolonged drought in the East African Rift Valley

Thomas, E. A., Needoba, J., Kaberia, D., Butterworth, J., Adams, E. C., Oduor, P., Macharia, D., Mitheu, F., Mugo, R. & Nagel, C., May 20 2019, In : Science of the Total Environment. 666, p. 1265-1272 8 p.

Research output: Contribution to journalArticle

Open Access
8 Scopus citations

Rational Design of a Histidine-Methionine Site Modeling the M-Center of Copper Monooxygenases in a Small Metallochaperone Scaffold

Alwan, K. B., Welch, E. F., Arias, R. J., Gambill, B. F. & Blackburn, N., Jan 1 2019, In : Biochemistry.

Research output: Contribution to journalArticle

2 Scopus citations

Regulation of reproductive processes with dynamic energy budgets

Muller, E. B., Lika, K., Nisbet, R. M., Schultz, I. R., Casas, J., Gergs, A., Murphy, C. A., Nacci, D. & Watanabe, K. H., May 2019, In : Functional Ecology. 33, 5, p. 819-832 14 p.

Research output: Contribution to journalArticle

1 Scopus citations

Shipworm bioerosion of lithic substrates in a freshwater setting, Abatan River, Philippines: Ichnologic, paleoenvironmental and biogeomorphical implications

Reuben Shipway, J., Rosenberg, G., Concepcion, G. P., Haygood, M. G., Savrda, C. & Distel, D. L., Oct 2019, In : PloS one. 14, 10, e0224551.

Research output: Contribution to journalArticle

Open Access

Structural and Spectroscopic Characterization of a Product Schiff Base Intermediate in the Reaction of the Quinoprotein Glycine Oxidase, GoxA

Avalos, D., Sabuncu, S., Mamounis, K. J., Davidson, V. L., Moënne-Loccoz, P. & Yukl, E. T., Feb 12 2019, In : Biochemistry. 58, 6, p. 706-713 8 p.

Research output: Contribution to journalArticle

2 Scopus citations

Tamilokus mabinia, a new, anatomically divergent genus and species of wood-boring bivalve from the Philippines

Reuben Shipway, J., Altamia, M. A., Rosenberg, G., Concepcion, G. P., Haygood, M. G. & Distel, D. L., Jan 1 2019, In : PeerJ. 2019, 2, e6256.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

The binuclear cluster of [FeFe] hydrogenase is formed with sulfur donated by cysteine of an [Fe(Cys)(CO)2(CN)] organometallic precursor

Rao, G., Pattenaude, S. A., Alwan, K., Blackburn, N. J., Britt, R. D. & Rauchfuss, T. B., Oct 15 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 42, p. 20850-20855 6 p.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

The Speciation and Mobility of Mn and Fe in Estuarine Sediments

Oldham, V. E., Siebecker, M. G., Jones, M. R., Mucci, A., Tebo, B. M. & Luther, G. W., Apr 1 2019, In : Aquatic Geochemistry. 25, 1-2, p. 3-26 24 p.

Research output: Contribution to journalArticle

2 Scopus citations

Tuning the Geometric and Electronic Structure of Synthetic High-Valent Heme Iron(IV)-Oxo Models in the Presence of a Lewis Acid and Various Axial Ligands

Ehudin, M. A., Gee, L. B., Sabuncu, S., Braun, A., Moënne-Loccoz, P., Hedman, B., Hodgson, K. O., Solomon, E. I. & Karlin, K. D., Apr 10 2019, In : Journal of the American Chemical Society. 141, 14, p. 5942-5960 19 p.

Research output: Contribution to journalArticle

7 Scopus citations

Unique Structural Characteristics of Catalytic Palladium/Gold Nanoparticles on Graphene

Meduri, K., Stauffer, C., O'Brien Johnson, G., Longo, P., Tratnyek, P. & Jiao, J., Jan 1 2019, In : Microscopy and Microanalysis. p. 1-12 12 p.

Research output: Contribution to journalArticle

2 Scopus citations
2018

Amphi-enterobactin commonly produced among Vibrio campbellii and Vibrio harveyi strains can be taken up by a novel outer membrane protein FapA that also can transport canonical Fe(III)-enterobactin

Naka, H., Reitz, Z. L., Jelowicki, A. L., Butler, A. & Haygood, M. G., Oct 1 2018, In : Journal of Biological Inorganic Chemistry. 23, 7, p. 1009-1022 14 p.

Research output: Contribution to journalArticle

1 Scopus citations

A Nonheme Sulfur-Ligated {FeNO}6 Complex and Comparison with Redox-Interconvertible {FeNO}7 and {FeNO}8 Analogues

Dey, A., Confer, A. M., Vilbert, A. C., Moënne-Loccoz, P., Lancaster, K. M. & Goldberg, D. P., Oct 8 2018, In : Angewandte Chemie - International Edition. 57, 41, p. 13465-13469 5 p.

Research output: Contribution to journalArticle

2 Scopus citations

Determination of intracellular pH in phytoplankton using the fluorescent probe, SNARF, with detection by fluorescence spectroscopy

Golda-VanEeckhoutte, R. L., Roof, L. T., Needoba, J. A. & Peterson, T. D., Sep 2018, In : Journal of Microbiological Methods. 152, p. 109-118 10 p.

Research output: Contribution to journalArticle

3 Scopus citations

Discontinuous Galerkin modeling of the Columbia River's coupled estuary-plume dynamics

Vallaeys, V., Kärnä, T., Delandmeter, P., Lambrechts, J., Baptista, A. M., Deleersnijder, E. & Hanert, E., Apr 2018, In : Ocean Modelling. 124, p. 111-124 14 p.

Research output: Contribution to journalArticle

5 Scopus citations

Dissolved Mn(III) in water treatment works: Prevalence and significance

Johnson, K. L., McCann, C. M., Wilkinson, J. L., Jones, M., Tebo, B. M., West, M., Elgy, C., Clarke, C. E., Gowdy, C. & Hudson-Edwards, K. A., Sep 1 2018, In : Water Research. 140, p. 181-190 10 p.

Research output: Contribution to journalArticle

11 Scopus citations

Divergent gene expression among phytoplankton taxa in response to upwelling

Lampe, R. H., Cohen, N. R., Ellis, K. A., Bruland, K. W., Maldonado, M. T., Peterson, T. D., Till, C. P., Brzezinski, M. A., Bargu, S., Thamatrakoln, K., Kuzminov, F. I., Twining, B. S. & Marchetti, A., Aug 2018, In : Environmental Microbiology. 20, 8, p. 3069-3082 14 p.

Research output: Contribution to journalArticle

7 Scopus citations

Dynamic interactions between sulfidated zerovalent iron and dissolved oxygen: Mechanistic insights for enhanced chromate removal

Shao, Q., Xu, C., Wang, Y., Huang, S., Zhang, B., Huang, L., Fan, D. & Tratnyek, P. G., May 15 2018, In : Water Research. 135, p. 322-330 9 p.

Research output: Contribution to journalArticle

27 Scopus citations
2 Scopus citations

Effects of copper occupancy on the conformational landscape of peptidylglycine α-hydroxylating monooxygenase

Maheshwari, S., Shimokawa, C., Rudzka, K., Kline, C. D., Eipper, B. A., Mains, R. E., Gabelli, S. B., Blackburn, N. & Amzel, L. M., Dec 1 2018, In : Communications Biology. 1, 1, 74.

Research output: Contribution to journalArticle

Open Access
6 Scopus citations

Heme redox potentials hold the key to reactivity differences between nitric oxide reductase and heme-copper oxidase

Bhagi-Damodaran, A., Reed, J. H., Zhu, Q., Shi, Y., Hosseinzadeh, P., Sandoval, B. A., Harnden, K. A., Wang, S., Sponholtz, M. R., Mirts, E. N., Dwaraknath, S., Zhang, Y., Moenne-Loccoz, P. & Lu, Y., Jun 12 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 24, p. 6195-6200 6 p.

Research output: Contribution to journalArticle

11 Scopus citations

Mn(III) species formed by the multi-copper oxidase MnxG investigated by electron paramagnetic resonance spectroscopy

Tao, L., Stich, T. A., Soldatova, A. V., Tebo, B. M., Spiro, T. G., Casey, W. H. & Britt, R. D., Oct 1 2018, In : Journal of Biological Inorganic Chemistry. 23, 7, p. 1093-1104 12 p.

Research output: Contribution to journalArticle

2 Scopus citations

Modeling the Kinetics of Hydrogen Formation by Zerovalent Iron: Effects of Sulfidation on Micro- and Nano-Scale Particles

Qin, H., Guan, X., Bandstra, J. Z., Johnson, R. L. & Tratnyek, P. G., Dec 4 2018, In : Environmental Science and Technology. 52, 23, p. 13887-13896 10 p.

Research output: Contribution to journalArticle

13 Scopus citations

Nanoarchitecture of advanced core-shell zero-valent iron particles with controlled reactivity for contaminant removal

Kašlík, J., Kolařík, J., Filip, J., Medřík, I., Tomanec, O., Petr, M., Malina, O., Zbořil, R. & Tratnyek, P. G., Dec 15 2018, In : Chemical Engineering Journal. 354, p. 335-345 11 p.

Research output: Contribution to journalArticle

9 Scopus citations

Nitric Oxide Reductase Activity in Heme-Nonheme Binuclear Engineered Myoglobins through a One-Electron Reduction Cycle

Sabuncu, S., Reed, J. H., Lu, Y. & Moenne-Loccoz, P., Dec 19 2018, In : Journal of the American Chemical Society. 140, 50, p. 17389-17393 5 p.

Research output: Contribution to journalArticle

3 Scopus citations

Observations on the life history and geographic range of the giant chemosymbiotic shipworm Kuphus polythalamius (Bivalvia: Teredinidae)

Shipway, J. R., Altamia, M. A., Haga, T., Velásquez, M., Albano, J., Dechavez, R., Concepcion, G. P., Haygood, M. G. & Distel, D. L., Dec 1 2018, In : Biological Bulletin. 235, 3, p. 167-177 11 p.

Research output: Contribution to journalArticle

5 Scopus citations

Oxidative formation and removal of complexed Mn(III) by pseudomonas species

Wright, M. H., Geszvain, K., Oldham, V. E., Luther, G. W. & Tebo, B., Apr 12 2018, In : Frontiers in Microbiology. 9, APR, 560.

Research output: Contribution to journalArticle

6 Scopus citations

Phosphorus forms in sediments of a river-dominated estuary

Watson, S. J., Cade-Menun, B. J., Needoba, J. A. & Peterson, T. D., Sep 4 2018, In : Frontiers in Marine Science. 5, SEP, 302.

Research output: Contribution to journalArticle

5 Scopus citations