Research Output 1984 2019

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Conference contribution
2015

The power of estuarine collaboratories

Baptista, A., May 14 2015, 2015 IEEE Underwater Technology, UT 2015. Institute of Electrical and Electronics Engineers Inc., 7108241

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Estuaries
Sustainable development
Rivers
Earth (planet)
Sensors
2013
1 Citation (Scopus)

US experience will advance Gulf Ecosystem Research

Abdel-Jabbar, N., Baptista, A., Karna, T., Turner, P. & Sen, G., 2013, Communications in Computer and Information Science. Springer Verlag, Vol. 399 PART II. p. 125-140 16 p. (Communications in Computer and Information Science; vol. 399 PART II).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ecosystems
Rivers
Numerical models
Visualization
Water
2012
10 Citations (Scopus)

Navigating oceans of data

Maier, D., Megler, V. M., Baptista, A., Jaramillo, A., Seaton, C. & Turner, P. J., 2012, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 7338 LNCS. p. 1-19 19 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7338 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ocean
Fixed platforms
Colliding beam accelerators
Estuaries
Chlorophyll
2011
7 Citations (Scopus)

Electrochemistry of natural organic matter

Nurmi, J. T. & Tratnyek, P., 2011, ACS Symposium Series. American Chemical Society, Vol. 1071. p. 129-151 23 p. (ACS Symposium Series; vol. 1071).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Electrochemistry
Biological materials
Voltammetry
Electrons
Kinetics
7 Citations (Scopus)

Introduction to aquatic redox chemistry

Grundl, T. J., Haderlein, S., Nurmi, J. T. & Tratnyek, P., 2011, ACS Symposium Series. American Chemical Society, Vol. 1071. p. 1-14 14 p. (ACS Symposium Series; vol. 1071).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Redox reactions
Ladders
Trace Elements
Terminology
Trace elements
9 Citations (Scopus)

One-electron reduction potentials from chemical structure theory calculations

Bylaska, E. J., Salter-Blanc, A. J. & Tratnyek, P., 2011, ACS Symposium Series. American Chemical Society, Vol. 1071. p. 37-64 28 p. (ACS Symposium Series; vol. 1071).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Aromatic compounds
Dehalogenation
Electrons
Redox reactions
Nitro Compounds
23 Citations (Scopus)

Reactivity of zerovalent metals in aquatic media: Effects of organic surface coatings

Tratnyek, P., Salter-Blanc, A. J., Nurmi, J. T., Amonette, J. E., Liu, J., Wang, C., Dohnalkova, A. & Baer, D. R., 2011, ACS Symposium Series. American Chemical Society, Vol. 1071. p. 381-406 26 p. (ACS Symposium Series; vol. 1071).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Biological materials
Metals
Coatings
Organic coatings
Carboxymethylcellulose Sodium

Spectral fluorescence study of the degradation of crude oil mixed with seawater

Slasor, L. A., Needoba, J. & Koch, C., 2011, ACS National Meeting Book of Abstracts.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Petroleum
Polycyclic aromatic hydrocarbons
Seawater
Crude oil
Fluorescence

Testing in EHS: What is the current status of experimentation?

Baer, D. R., Karakoti, A. S., Munusamy, P., Thrall, B. D., Pounds, J. G., Teeguarden, J. G., Amonette, J. E., Orr, G., Tratnyek, P. & Nurmi, J. T., 2011, Proceedings of the IEEE Conference on Nanotechnology. p. 18-19 2 p. 6144671

Research output: Chapter in Book/Report/Conference proceedingConference contribution

experimentation
Nanoparticles
nanoparticles
Testing
Biological systems
2010
1 Citation (Scopus)

CoTrack: A framework for tracking dynamic features with static and mobile sensors

Dang, T., Bulusu, N., Feng, W. C., Frolov, S. & Baptista, A., 2010, Proceedings - IEEE INFOCOM. 5462234

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Sensors
Numerical models
Sensor networks
Macros
Estuaries
16 Citations (Scopus)

Environmental applications of zerovalent metals: Iron vs. Zinc

Tratnyek, P., Salter, A. J., Nurmi, J. T. & Sarathy, V., Aug 6 2010, ACS Symposium Series. American Chemical Society, Vol. 1045. p. 165-178 14 p. (ACS Symposium Series; vol. 1045).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Zinc
Iron
Metals
Particle size
Carbon tetrachloride
5 Citations (Scopus)

Real-time biosensor platform: Fully integrated device for impedimetric assays

Ghindilis, A. L., Schwarzkopf, K. R., Messing, D. S., Sezan, I., Schuele, P., Zhan, C., Smith, M. W., Simon, H. & Evans, D. R., 2010, ECS Transactions. 8 ed. Vol. 33. p. 59-68 10 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Biosensors
Assays
Sensor arrays
Electrodes
Microelectrodes
2008
21 Citations (Scopus)

End-to-End eScience: integrating workflow, query, visualization, and provenance at an Ocean Observatory

Howe, B., Lawson, P., Bellinger, R., Anderson, E., Santos, E., Freire, J., Scheidegger, C., Baptista, A. & Silva, C., 2008, Proceedings - 4th IEEE International Conference on eScience, eScience 2008. p. 127-134 8 p. 4736749

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Observatories
Visualization
Information management
Engines
2 Citations (Scopus)

Integrating a circulation model and an ecological model to simulate the dynamics of Zooplankton

Rodrigues, M., Oliveira, A., Queiroga, H., Zhang, Y. J., Fortunato, A. B. & Baptista, A., 2008, Proceedings of the International Conference on Estuarine and Coastal Modeling. p. 427-446 20 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ecological Model
Zooplankton
zooplankton
Phytoplankton
Hydrodynamics
2007
3 Citations (Scopus)

Adaptive sampling in the Columbia river observation network

Dang, T., Bulusu, N., Feng, W. C., Frolov, S. & Baptista, A., 2007, SenSys'07 - Proceedings of the 5th ACM Conference on Embedded Networked Sensor Systems. p. 429-430 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Rivers
Sampling
1 Citation (Scopus)

Effect of aging on the structure and reactivity of nanoparticles of iron/iron oxides

Sarathy, V., Nurmi, J. T., Tratnyek, P., Amonette, J. E., Baer, D. R. & Chun, C. L., 2007, ACS National Meeting Book of Abstracts.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Carbon Tetrachloride
Ferrosoferric Oxide
Iron
Aging of materials
Nanoparticles
7 Citations (Scopus)

Near optimal sensor selection in the COlumbia RIvEr (CORIE) observation network for data assimilation using genetic algorithms

Dang, T., Frolov, S., Bulusu, N., Feng, W. C. & Baptista, A., 2007, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 4549 LNCS. p. 253-266 14 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4549 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Data Assimilation
Genetic algorithms
Observation
Genetic Algorithm
Rivers

The ocean appliance: Complete platform provisioning for low-cost data sharing

Howe, B., Baptista, A., Hagerty, N., Seaton, C., Van Matre, E., Maier, D. & Turner, P., 2007, Oceans Conference Record (IEEE). 4449353

Research output: Chapter in Book/Report/Conference proceedingConference contribution

data management
ocean
telemetry
cost
hardware
6 Citations (Scopus)

Using XAS and SXRF to study copper in wilson disease at the molecular and tissue level

Ralle, M., Blackburn, N. & Lutsenko, S., 2007, AIP Conference Proceedings. Vol. 882. p. 328-330 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

synchrotrons
copper
fluorescence
x rays
liver
2006
13 Citations (Scopus)

CORIE: The first decade of a coastal-margin collaborative observatory

Baptista, A., 2006, OCEANS 2006. 4099047

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Observatories
Rivers

Revisiting the effect of natural organic matter on contaminant reduction by iron

Tratnyek, P., Nurmi, J. T. & Bae, B., 2006, ACS, Division of Environmental Chemistry - Preprints of Extended Abstracts. 1 ed. Vol. 46. p. 872-877 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Biological materials
Impurities
Iron
Amber
Trichloroethylene
2005
1 Citation (Scopus)

Modelling groundwater/surface water interactions using MODFLOW-WhaT

Thoms, R. B. & Johnson, R., 2005, IAHS-AISH Publication. 297 ed. p. 466-472 7 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

groundwater-surface water interaction
subsurface flow
modeling
simulation
flume experiment
2 Citations (Scopus)

Nanosize effects on the kinetics of contaminant reduction by iron and iron oxides

Tratnyek, P., Sarathy, V. & Bae, B., 2005, ACS, Division of Environmental Chemistry - Preprints of Extended Abstracts. 2 ed. Vol. 45. p. 673-677 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Iron oxides
Impurities
Iron
Kinetics
Rate constants
2004

A GIS-based tool to visualize environmental contamination and biota prevalence

Watanabe-Sailor, K., Campanella, R., Meffert, D. & Short, J., 2004, Transactions of the American Nuclear Society. Folkerts, D. K. (ed.). Vol. 91. p. 69-70 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Geographic information systems
Contamination
Biota
5 Citations (Scopus)

Analysis of the stratification in the Guadiana estuary

Pinto, L., Oliveira, A., Fortunato, A. B. & Baptista, A., 2004, Proceedings of the International Conference on Estuarine and Coastal Modeling. Spaulding, M. L. (ed.). p. 1094-1113 20 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Estuaries
stratification
estuary
Rivers
river flow

Overcoming barriers to the remediation of carbon tetrachloride through manipulation of competing reaction mechanisms

Tratnyek, P., Amonette, J. E. & Bylaska, E. J., 2004, ACS National Meeting Book of Abstracts. 1 ed. Vol. 227.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

formic acid
Carbon Tetrachloride
Remediation
Degradation
Methylene Chloride
1 Citation (Scopus)

Overcoming barriers to the remediation of carbon tetrachloride through manipulation of competing reaction mechanisms

Tratnyek, P., Amonette, J. E. & Bylaska, E. J., 2004, ACS Division of Environmental Chemistry, Preprints. 1 ed. Vol. 44.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Carbon tetrachloride
Carbon Tetrachloride
Remediation
Hydrolysis
2-Propanol
2 Citations (Scopus)

Parameterized novelty detection for environmental sensor monitoring

Archer, C., Leen, T. K. & Baptista, A., 2004, Advances in Neural Information Processing Systems. Neural information processing systems foundation

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Biofouling
Monitoring
Sensors
Estuaries
Detectors
2003

Electrochemical studies of a packed iron powder electrode in solutions containing corrosive anions and organic oxidants

Nurmi, J. T. & Tratnyek, P., 2003, ACS Division of Environmental Chemistry, Preprints. 2 ed. Vol. 43.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Caustics
Iron powder
Oxidants
Anions
Negative ions
2 Citations (Scopus)

Visualizing Spatial and Temporal Variability in Coastal Observatories

Jiménez, W. H., Corrêa, W. T., Silva, C. T. & Baptista, A., 2003, Proceedings of the IEEE Visualization Conference. Turk, G., Wijk, J. J. & Moorhead, R. (eds.). p. 569-574 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Observatories
Visualization
Rivers
Natural resources management
Estuaries
2001
19 Citations (Scopus)

Model predictive neural control of a high-fidelity helicopter model

Bogdanov, A. A., Wan, E. A., Carlsson, M., Zhang, Y., Kieburtz, R. & Baptista, A., 2001, AIAA Guidance, Navigation, and Control Conference and Exhibit.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Helicopters
Riccati equations
Controllers
Neural networks
Recurrent neural networks
2000
3 Citations (Scopus)

Chemical and biological reduction of contaminant metals by natural organic matter

Gu, B., Chen, J., Vairavamurthy, M. A., Choi, S. & Tratnyek, P., Aug 20 2000, ACS Division of Environmental Chemistry, Preprints. 2 ed. Vol. 40. p. 443-446 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Biological materials
Metals
Impurities

Effects of environmental conditions on MTBE degradation in model column aquifers: II. Kinetics

Church, C. D., Pankow, J. F. & Tratnyek, P., 2000, ACS National Meeting Book of Abstracts. 2 ed. Vol. 40. p. 238-240 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Aquifers
tert-Butyl Alcohol
Degradation
Kinetics
Biodegradation
1 Citation (Scopus)

Electrochemical properties of natural organic matter (NOM), fractions of NOM, and model biogeochemical electron shuttles

Nurmi, J. T. & Tratnyek, P., Aug 20 2000, ACS Division of Environmental Chemistry, Preprints. 2 ed. Vol. 40. p. 418-420 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Electrochemical properties
Biological materials
Electrons

Evaluation of in situ air sparging for MTBE removal from a gasoline source

Amerson, I. L. & Johnson, R., 2000, ACS National Meeting Book of Abstracts. 2 ed. Vol. 40. p. 247-250 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Gasoline
Air
Vaporization
methyl tert-butyl ether
Impurities

Molecular probe studies of contaminant transformation in reducing sediments: Hydride transfer and dehydrogenase activity

Tratnyek, P., Reilkoff, T. E., Bandstra, J. Z. & Miehr, R., 2000, ACS National Meeting Book of Abstracts. 2 ed. Vol. 40. p. 353-355 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

omega-Chloroacetophenone
Molecular Probes
Hydrides
Oxidoreductases
Sediments

Molecular probe studies of contaminant transformation in reducing sediments: Hydride transfer and dehydrogenase activity

Tratnyek, P., Reilkoff, T. E., Bandstra, J. Z. & Miehr, R., Aug 20 2000, ACS Division of Environmental Chemistry, Preprints. 2 ed. Vol. 40. p. 353-355 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Molecular Probes
Hydrides
Oxidoreductases
Sediments
Impurities
2 Citations (Scopus)

Pathways for the degradation of MTBE and other fuel oxygenates by isolate PM1

Church, C. D., Tratnyek, P. & Scow, K. M., 2000, ACS National Meeting Book of Abstracts. 2 ed. Vol. 40. p. 261-263 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

tert-Butyl Alcohol
Degradation
methyl tert-butyl ether
Substrates
Enzymes
121 Citations (Scopus)

Research challenges in environmental observation and forecasting systems

Steere, D. C., Baptista, A., McNamee, D., Pu, C. & Walpole, J., 2000, Proceedings of the Annual International Conference on Mobile Computing and Networking, MOBICOM. ACM, p. 292-299 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Mobile computing
Natural resources
Ad hoc networks
Disasters
Agriculture
1998
1 Citation (Scopus)

Expression and functional studies on lignin and manganese peroxidase

Gold, M. H., Gelpke, M. D. S., Youngs, H., Kishi, K., Mayfield-Gambill, M. & Moenne-Loccoz, P., 1998, Proceedings of the International Conference on Biotechnology in the Pulp and Paper Industry. Anon (ed.). CPPA, Vol. 1.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

manganese peroxidase
Lignin
Heme
Manganese
Enzymes
1996
2 Citations (Scopus)

Diagnostic analysis of estuarine residence times

Oliveira, A. & Baptista, A., 1996, International Conference on Computational Methods in Water Resources, CMWR. Computational Mechanics Publ, Vol. 2. p. 355-362 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Estuaries
Cleaning
1994
10 Citations (Scopus)

Localized sigma coordinates for the vertical structure of hydrodynamic models

Fortunato, A. B. & Baptista, A., 1994, Proc 3 Int Conf Estuarine Coastal Model 3. Spaulding, M. L., Bedford, K., Blumberg, A., Cheng, R. & Swanson, C. (eds.). Publ by ASCE, p. 323-335 13 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Error analysis
Hydrodynamics
1992
4 Citations (Scopus)

Modeling the pathways of nonconservative substances in estuaries

Wood, T. & Baptista, A., 1992, Proc 2 Int Conf Estuarine Coastal Model. Publ by ASCE, p. 280-291 12 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Estuaries
Advection
1989
5 Citations (Scopus)

Eulerian-Lagrangian model for sediment transport in estuaries

Barros, A. P. & Baptista, A., 1989, Estuarine Coastal Model Proc Conf. Publ by ASCE, p. 102-112 11 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Sediment transport
Estuaries
Erosion
Marinas
Flocculation